Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H24
         (284 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205888-1|AAF22799.1|  777|Homo sapiens AXIN2 protein.                29   2.7  
BC020264-1|AAH20264.1|  406|Homo sapiens HERPUD family member 2 ...    27   8.3  
BC005091-1|AAH05091.1|  406|Homo sapiens HERPUD2 protein protein.      27   8.3  
AK125990-1|BAC86379.1| 1205|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein.     27   8.3  

>AF205888-1|AAF22799.1|  777|Homo sapiens AXIN2 protein.
          Length = 777

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 17  CSGRSSFYCLSLCASAFKADT*LSANLFTIFNTMRSLNY*QALESAGTR 163
           C G S +YC S C S  KA   + +  F   +T ++     A  S G R
Sbjct: 542 CPGGSEYYCYSKCKSHSKAPETMPSEQFGAQSTKKAYPLESARSSPGER 590


>BC020264-1|AAH20264.1|  406|Homo sapiens HERPUD family member 2
           protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 124 PELLTSSRVRRDAHGALTLKSNSTSG-AGVQVPFAGYDKNIVCAIGS 261
           P     S   R++H ALT  SNS+S  +G   P +G  + +  A+GS
Sbjct: 91  PPSSPKSSTNRESHEALTSSSNSSSDHSGSTTPSSG-QETLSLAVGS 136


>BC005091-1|AAH05091.1|  406|Homo sapiens HERPUD2 protein protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 124 PELLTSSRVRRDAHGALTLKSNSTSG-AGVQVPFAGYDKNIVCAIGS 261
           P     S   R++H ALT  SNS+S  +G   P +G  + +  A+GS
Sbjct: 91  PPSSPKSSTNRESHEALTSSSNSSSDHSGSTTPSSG-QETLSLAVGS 136


>AK125990-1|BAC86379.1| 1205|Homo sapiens protein ( Homo sapiens cDNA
            FLJ44002 fis, clone TESTI4022873. ).
          Length = 1205

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 15   HVREDRLFIACRSVRRRSKPIPDCQRTCLLYS 110
            HV   R       VRR  K + DCQ+  +LY+
Sbjct: 966  HVEISRAHEIANEVRRVKKQLKDCQQLAMLYN 997


>AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein.
          Length = 4355

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 15   HVREDRLFIACRSVRRRSKPIPDCQRTCLLYS 110
            HV   R       VRR  K + DCQ+  +LY+
Sbjct: 991  HVEISRAHEIANEVRRVKKQLKDCQQLAMLYN 1022


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,060,286
Number of Sequences: 237096
Number of extensions: 632102
Number of successful extensions: 1429
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)