Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H24
         (284 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    27   1.6  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    27   1.6  
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    27   2.2  
Z68003-2|CAA91976.2|  560|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical pr...    26   3.8  
AC103567-4|AAL35731.2|  598|Caenorhabditis elegans Hypothetical ...    26   5.0  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    25   6.6  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    25   6.6  
Z70285-2|CAA94289.2|  183|Caenorhabditis elegans Hypothetical pr...    25   8.7  
U08022-1|AAA17722.1|  515|Caenorhabditis elegans STE12 transcrip...    25   8.7  

>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 205 GVQVPFAGYDKNIVCAIGSLDLTNRQ 282
           GV VPF G DK+I+      D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 205 GVQVPFAGYDKNIVCAIGSLDLTNRQ 282
           GV VPF G DK+I+      D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 73  RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 174
           R L+ +EP+ +  +Y+   LLTSS + R    +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704


>Z68003-2|CAA91976.2|  560|Caenorhabditis elegans Hypothetical
           protein E02H4.2 protein.
          Length = 560

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 241 YSCRNQQRVLELQHQRYYWT*A*ELRARPC 152
           Y   NQ    +L HQ+YY +    L+++PC
Sbjct: 119 YQYANQNHPAQLPHQKYYNSEQYALQSQPC 148


>Z83111-4|CAB05535.2|  498|Caenorhabditis elegans Hypothetical
           protein F57G8.5 protein.
          Length = 498

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 1   FQYTNMFGKIVFLLLVALCVGVQSRYLIVSEPVYYIQHYEEPE 129
           F ++ +  KIV L +  +C+G+  R L+V    ++  H+   E
Sbjct: 351 FDFSTLSWKIVLLCISVICIGLIVRALLVMLTTHF-SHFNVKE 392


>AC103567-4|AAL35731.2|  598|Caenorhabditis elegans Hypothetical
           protein Y51F10.4 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 284 FCLLVKSKEPIAHTIFL 234
           FCL+++ KE I HT+ L
Sbjct: 340 FCLILRDKESITHTVDL 356


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 101 TIFNTMRSLNY*QALESAGTRTELSRSSPIVPLVLEFKYPLLVTTRI 241
           T+   +  LNY QA+   G  TEL       PL  +    L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 101 TIFNTMRSLNY*QALESAGTRTELSRSSPIVPLVLEFKYPLLVTTRI 241
           T+   +  LNY QA+   G  TEL       PL  +    L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>Z70285-2|CAA94289.2|  183|Caenorhabditis elegans Hypothetical
           protein F56C4.2 protein.
          Length = 183

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 192 YLWCWSSSTLCWLRQE 239
           YLWCW +S L   +Q+
Sbjct: 134 YLWCWKTSELSIPKQD 149


>U08022-1|AAA17722.1|  515|Caenorhabditis elegans STE12
           transcriptional activator protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 137 QALESAGTRTELSRSSPIVPLVL 205
           +ALE+AG+ T  +   P+ PL++
Sbjct: 493 EALEAAGSETAATTQKPLKPLIV 515


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,980,474
Number of Sequences: 27780
Number of extensions: 98259
Number of successful extensions: 299
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)