Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H23
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 36 0.004
SPBC21C3.17c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.6
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 26 3.4
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 4.5
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 4.5
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.0
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 25 7.9
SPCC1442.12 |||CDP-diacylglycerol--serine O-phosphatidyltransfer... 25 7.9
SPBC83.14c |rfc5||DNA replication factor C complex subunit Rfc5 ... 25 7.9
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +2
Query: 26 GTCICGVCECNKMDDPLKVISGPFCECDNFTCDRNKGQLCSGHGECVCGKCSCSPEYTGP 205
GTC G+ E + D + C CD TC KG LC + C +C +
Sbjct: 316 GTCGNGIVEDGEECDCGEDCENNPC-CDGKTCKLTKGSLCDDQQDACCYQC----HFKNA 370
Query: 206 ACQCLKDQTNCKSPDNNEICSG-NGKC 283
C + C P E C+G + KC
Sbjct: 371 GTLCRQSTNPCDKP---EFCTGISSKC 394
>SPBC21C3.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 186
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 282 VFAANAFAMLEKIDISPANTVNNVRRALDVVASSRTACFV 401
V AN F +D+SPA +VN + + L + S +C +
Sbjct: 116 VLLANTFYWKMVVDVSPAFSVNPIDKKLAIGLSVGLSCCI 155
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 209 CQCLKDQTNCKSPDNNEICSGNGKCVCGQCVCNVGEDRHFSGKYCE 346
C C D+T +C G G CG C V ED + S +YCE
Sbjct: 693 CVCGLDETRSSFKTLTTMCFG-GDDNCG---CQVFEDVNSSLEYCE 734
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 4.5
Identities = 29/126 (23%), Positives = 39/126 (30%), Gaps = 12/126 (9%)
Frame = +2
Query: 32 CICGVCECN-KMDDPLKVISGPF-CE--------CDNFTCDRN-KGQLCSGHGECVCGKC 178
C+CG + + + KV + PF CE C TC + LC E + KC
Sbjct: 314 CLCGKESIHARCSNISKVNTEPFRCENVCDELLPCGEHTCKKRCHSGLCGACFEPINAKC 373
Query: 179 SCSPEYTGPACQCLKDQTNCKSPDNNEICSGNGKCVCGQ-CVCNVGEDRHFSGKYCEQCP 355
C C L + K +N + G C C H K C
Sbjct: 374 YCGLHSKTYPCSSLPSPSISKKDENGSVKEWFGYYSCNNPCTLFFDCGLHKCSKTCHPIS 433
Query: 356 TCPGRC 373
C
Sbjct: 434 ETRAHC 439
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 239 KSPDNNEICSGNGKCVCGQCVCNVGEDRHFSGKYCEQCPTCPGRCGEF 382
K+P IC G +C N R +G+ + TC G G F
Sbjct: 1924 KTPILPAICMLCGSVICFNARQNTVSSRRLTGECNKHAATCTGSVGIF 1971
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 198 RDPPASASRTRPTVNHQIIMKYAAVMESVFAANAFAMLEKIDISPANTVNN 350
+D + + ++ + N Q+ + YA++ ESV A N + + + N + N
Sbjct: 1808 KDESSCSQASQCSENGQVDLSYASLSESVHAFNNRFVAHNVQVKWNNFIRN 1858
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 192 SGEQLHFPQTHSPCPEHSWPLFLSHVKLSHSQN-GPDITLSGSSILLHSQTPQMQVPR 22
+G + P +S P +H L+ +N GP +T + S + +++P+ PR
Sbjct: 349 NGHHISDPNLNSSISLKFAPEDTAHNSLTSQENVGPQVTTTSLSNMTVAESPRTDTPR 406
>SPCC1442.12 |||CDP-diacylglycerol--serine O-phosphatidyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 250
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 421 LTAFVHFTKHAVLELATTSRARRTLFTVFAGEMSIFSNIANALA 290
L A+V+ +H L A TL F G MSIFS++ L+
Sbjct: 27 LLAYVNDNRHFSLIRALHLADLITLMNGFCGVMSIFSSLRYCLS 70
>SPBC83.14c |rfc5||DNA replication factor C complex subunit Rfc5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 358
Score = 25.0 bits (52), Expect = 7.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 311 QHCKRIGRKHTFHYRCIFHYYLVIYS 234
+H R+G K FH Y++ +Y+
Sbjct: 322 EHRTRMGNKSIFHLEAFVAYFMKVYA 347
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,487,949
Number of Sequences: 5004
Number of extensions: 57497
Number of successful extensions: 171
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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