Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H23
(575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0377 - 4970034-4970687 38 0.006
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 31 0.50
12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 31 0.87
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 31 0.87
06_02_0210 - 13039479-13039566,13039674-13039770,13040470-130405... 31 0.87
05_06_0040 + 25116732-25118030 31 0.87
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677... 30 1.1
02_04_0281 + 21563588-21563696,21565053-21565708,21565793-215658... 30 1.5
10_08_0798 + 20649370-20649428,20649515-20649719 29 2.0
06_01_0465 - 3304417-3306834 29 2.0
02_01_0528 + 3843535-3843601,3843809-3843984 29 2.0
02_05_0930 - 32801737-32801936,32802038-32802107 29 2.7
07_01_0346 - 2501825-2501908,2502143-2502244,2502623-2502646,250... 29 3.5
02_05_1210 - 34954006-34955412 29 3.5
02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196... 29 3.5
10_06_0012 - 9586478-9588880 28 4.6
09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636... 28 4.6
04_03_0917 + 20798977-20801369,20801578-20801581 28 4.6
04_03_0911 + 20767041-20767047,20767119-20769322 28 4.6
01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557 28 4.6
12_02_0384 + 18409831-18409843,18410378-18410471,18410614-184107... 28 6.1
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 6.1
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 28 6.1
01_07_0358 + 43039613-43039677,43039742-43039807,43039918-43040029 28 6.1
09_04_0652 - 19227686-19227926,19229368-19232294 27 8.1
04_03_0852 + 20289439-20289721,20289858-20290642 27 8.1
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 27 8.1
>04_01_0377 - 4970034-4970687
Length = 217
Score = 37.9 bits (84), Expect = 0.006
Identities = 37/115 (32%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Frame = +2
Query: 5 GPLCSNRGTCI-CGVCECNKMDDPLKVISGPFCECDNFTCDRN-KGQLCSGHGECV-CGK 175
G CSN C G C +GP C D C RN G+LC + C G
Sbjct: 70 GATCSNNQCCSQYGYCGFGSEYCGSGCQNGP-CRAD-IKCGRNANGELCPNNMCCSQWGY 127
Query: 176 CSCSPEYTGPACQ---------CLKDQTNCKSPDNNEICSGNGKCVCGQCVCNVG 313
C E+ G CQ C K K P NN CS G C G C G
Sbjct: 128 CGLGSEFCGNGCQSGACCPEKRCGKQAGGDKCP-NNFCCSAGGYCGLGGNYCGSG 181
Score = 32.3 bits (70), Expect = 0.28
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 12/78 (15%)
Frame = +2
Query: 116 TCDR-NKGQLCSGHGECVC--GKCSCSPEYTGPACQ---CLKDQTNCKSP------DNNE 259
TC + N G +C H C G C +Y G CQ C Q C S NN+
Sbjct: 20 TCGKQNDGMICP-HNLCCSQFGYCGLGRDYCGTGCQSGACCSSQ-RCGSQGGGATCSNNQ 77
Query: 260 ICSGNGKCVCGQCVCNVG 313
CS G C G C G
Sbjct: 78 CCSQYGYCGFGSEYCGSG 95
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 143 CSGHGECVCGKCSCSPEYTGPAC 211
CSGHG C G C C Y G C
Sbjct: 270 CSGHGHCRGGFCQCDGGYFGIDC 292
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 59 KMDDPLKVISGPFCECDNFTCDRNKGQLCS-----GHGECVCGKCSCSPEYTGPACQCLK 223
K D K+ + D FT +++K C+ + V K C +Y G + +
Sbjct: 200 KKPDDSKLTDWKTPDPDVFTTNKSKPGWCNVNPEDAYSSKVKFKEECDCKYDGLWGRFCE 259
Query: 224 DQTNCKSPDNNEICSGNGKCVCGQCVCNVG 313
+ C + CSG+G C G C C+ G
Sbjct: 260 TRVECSCINQ---CSGHGHCRGGFCQCDGG 286
>12_02_0870 -
23852923-23853228,23853416-23853728,23853813-23853938,
23854038-23854243,23854311-23854443,23854607-23854688,
23854785-23854914,23855034-23855126,23855211-23855333,
23855786-23855977,23858230-23858394,23858697-23858768,
23858826-23858945,23859873-23859949,23860032-23860398,
23860738-23861871
Length = 1212
Score = 30.7 bits (66), Expect = 0.87
Identities = 28/93 (30%), Positives = 37/93 (39%)
Frame = +2
Query: 125 RNKGQLCSGHGECVCGKCSCSPEYTGPACQCLKDQTNCKSPDNNEICSGNGKCVCGQCVC 304
R+KG C CVC K SP+Y G Q + + CSGN C +CV
Sbjct: 84 RSKGLKC-----CVCLKSVSSPQYMGGVIH----QCDICGATAHPSCSGNAHKDC-KCVS 133
Query: 305 NVGEDRHFSGKYCEQCPTCPGRCGEFKDCVLCE 403
VG + H ++ Q R E C C+
Sbjct: 134 MVGFE-HVIHQWAVQWIDTSDRSEEDSFCCYCD 165
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 14 CSNRGTCICGVC---ECNKMDDPLKVISGPFCEC-DNFTCDRNKGQLCSG 151
CS C+C +C CNKM+D ++ C C +LCSG
Sbjct: 666 CSRLADCLCCMCCIKACNKMNDQCAIVMTQVCAAFACLGCYECCAELCSG 715
>06_02_0210 -
13039479-13039566,13039674-13039770,13040470-13040545,
13041222-13041356
Length = 131
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +2
Query: 224 DQTNCKSPDNNEI----CSGNGKCVCGQCVCN-VGEDRHFSGKY 340
DQT P + + C GNG VC QC + V HF+G++
Sbjct: 50 DQTEKSPPKGSSLVCQDCEGNGAIVCNQCKGDGVNSVDHFNGRF 93
>05_06_0040 + 25116732-25118030
Length = 432
Score = 30.7 bits (66), Expect = 0.87
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -3
Query: 285 THFPLPLHISLLSGDLQLVWSLRHWQAGPVYSGEQLHF--PQTHSPCPEHSWPL----FL 124
TH P P + ++LS ++ R + + +G L F P TH+PC + PL FL
Sbjct: 291 THLPDPFYTAILSSLASVILYERSYDL-EMRTGFDLCFKIPCTHTPCTQDELPLINFHFL 349
Query: 123 SHVKLS 106
VKL+
Sbjct: 350 GDVKLT 355
>02_05_0146 -
26267245-26267339,26267427-26267469,26267589-26267725,
26268172-26268299,26268419-26268495,26268593-26268679,
26268817-26268933,26269115-26269165,26269383-26269497,
26270033-26270292
Length = 369
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = +2
Query: 122 DRNKGQLCSGHGECVCGKCSCSPEY--TGPACQCLKDQTNCKSPDNNEI--CSGNGKCVC 289
+ + + C G G C +CS + T P +P CSG GK +C
Sbjct: 268 EHKRCKYCLGTGYLACARCSSTGTLVLTEPVSTFSDGDQPLSTPRTERCPNCSGAGKVMC 327
Query: 290 GQCVC 304
C+C
Sbjct: 328 PTCLC 332
>02_04_0281 +
21563588-21563696,21565053-21565708,21565793-21565879,
21566487-21567461,21567640-21567786
Length = 657
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 263 CSGNGKCVCGQCVCNVGEDRHFS 331
C GNGKC C + + G RH S
Sbjct: 466 CMGNGKCSCEEANSSDGSQRHLS 488
>10_08_0798 + 20649370-20649428,20649515-20649719
Length = 87
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 152 HGECVCGK-CSCSPEYTGPACQCLKDQTNCKSPDNNEICSGNGKCVCGQC 298
H C CG C C+P C+C ++ + CS C C C
Sbjct: 32 HTTCSCGDHCGCNP------CRCGRESQPTGRENRRAGCSCGDSCTCASC 75
>06_01_0465 - 3304417-3306834
Length = 805
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 137 QLCSGHGECVCGKCSCSPEYTGPACQCLKDQTNCKSPDNNEICS 268
Q+C HG VCGK S P C CL+ K D ++ CS
Sbjct: 287 QVCEIHG--VCGKNSLCIYKPDPRCSCLEGFEMVKPGDWSQGCS 328
>02_01_0528 + 3843535-3843601,3843809-3843984
Length = 80
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 104 CDNFTCDRN-KGQLCSGH-GECVCGKCSCS 187
C TCD N K Q+ +G GEC G C C+
Sbjct: 41 CSPTTCDDNCKSQIGAGAVGECTSGGCQCT 70
>02_05_0930 - 32801737-32801936,32802038-32802107
Length = 89
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 77 KVISGPFCECDNFTCDRN-KGQLCSGHGECVCGKCSC 184
+VI+ + CD+ C N + Q G G+CV KC C
Sbjct: 35 EVINREYPTCDSGLCVANCQRQYRGGIGQCVGNKCKC 71
>07_01_0346 -
2501825-2501908,2502143-2502244,2502623-2502646,
2502693-2502819,2503122-2505109,2505804-2505821
Length = 780
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 476 FLGTVYIPACTCRSRLCTSHRVCAL 402
F G + IPA TC+SR CT+H +L
Sbjct: 15 FTGRMIIPASTCQSR-CTAHNDLSL 38
>02_05_1210 - 34954006-34955412
Length = 468
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 221 KDQTNCKSPDNNEICSGNGKCVCGQCVCNVG--EDRHFSGKYCEQCPTCPGRCGEFKDCV 394
K C S D CSG+G C C+ G D+ F G+Y + G G++ C
Sbjct: 391 KGSRECGSGDATGCCSGSGTST--DCGCSNGGCADKDFGGEYPMDYYSQDG--GDWNSCY 446
Query: 395 LCEVHKRGEK 424
+ + GE+
Sbjct: 447 MKKKPSTGER 456
>02_05_0888 - 32517876-32518087,32518320-32518694,32519551-32519638,
32520145-32520384,32521033-32521149,32521213-32521606,
32521752-32521998,32522086-32522315,32522768-32522823,
32522903-32523094,32523274-32523376,32523478-32523544,
32524312-32525154,32525547-32525670,32525965-32526213,
32526354-32526443,32526530-32526649,32526664-32526738,
32527001-32527147,32527255-32527365,32527446-32527667,
32527777-32527896,32527971-32528270,32528355-32528480,
32529246-32529360,32529556-32530019,32530119-32530253,
32530684-32530788,32530876-32531053,32531143-32531864
Length = 2188
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 389 CVLCEVHKRGEKYIAANDTCMPECTL 466
C++C K G++ +AAND +P CT+
Sbjct: 1235 CIICS--KYGKEPLAANDGVLPSCTV 1258
>10_06_0012 - 9586478-9588880
Length = 800
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 164 VCGKCSCSPEYTGPACQCLKDQTNCKSPDNNEICSGNGKCV 286
+CG S + P C CLK + +SP N ++ +G C+
Sbjct: 294 ICGPFSVCNDSNNPFCDCLKG-FSIRSPKNWDLEDRSGGCM 333
>09_04_0281 -
16360082-16361059,16361608-16361688,16363287-16363650,
16363675-16364348
Length = 698
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 399 QSTQSLN-SPQRPGHVGHCSQYLPEKCLSSPTLQTHWPQTHFPLPLHISL 253
QS Q + SPQ+P +G Q L E P HW Q H P PL L
Sbjct: 488 QSAQRQHCSPQQPLQLGLQLQQLVEH---EPQSGLHWAQEHEPQPLQPQL 534
>04_03_0917 + 20798977-20801369,20801578-20801581
Length = 798
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 143 CSGHGECVCGKCSCSPEYTGPACQCLKDQTNCKSPDNNEICSGNGKCV 286
C +G +CG + E P C+C+K + +SP++ E+ G CV
Sbjct: 294 CDVYG--ICGAFTVCEESKLPICKCMKG-FSVRSPNDWELDDRTGGCV 338
>04_03_0911 + 20767041-20767047,20767119-20769322
Length = 736
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 167 CGKCSCSPEYTGPACQCLKDQTNCKSPDNNEICSGNGKCV 286
CG + + T P+C C+K + +SP++ E+ G CV
Sbjct: 243 CGPFTVCNDITFPSCTCMKG-FSVQSPEDWELDDRTGGCV 281
>01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557
Length = 912
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 222 LRHWQAGPVYSGEQLHFPQTHSPCPEHSWPLFLSHVKLSHSQNGPDITLSGSS 64
L ++ PV+ + L+ H C H WPLF H L S + S SS
Sbjct: 145 LDRFRCAPVFLPDPLNERFYHRFCKRHLWPLF--HYMLPFSSSASPSPSSSSS 195
>12_02_0384 +
18409831-18409843,18410378-18410471,18410614-18410734,
18411635-18412543,18412772-18413211,18413481-18414516
Length = 870
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 566 NIYEQTILIVVETTTSVHLEIHRLRFSQFQFLGTVYIPACT 444
N+ LI E + + +HRL + FQ+L +YI CT
Sbjct: 654 NLPNMISLIFEECHNAKKISLHRLPCTGFQYLINLYIIECT 694
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 197 TGPACQCLKDQTNCKSPDNNEICSGNGKCVCGQCVCNVGED 319
+G D T CK D NE GK V G C G+D
Sbjct: 286 SGEQADAATDVTGCKGDDTNEGIGSGGKDVDGVTECK-GDD 325
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 197 TGPACQCLKDQTNCKSPDNNEICSGNGKCVCGQCVCNVGED 319
+G D T CK D NE GK V G C G+D
Sbjct: 588 SGEQADAATDVTGCKGDDTNEGIGSGGKDVDGVTECK-GDD 627
>01_07_0358 + 43039613-43039677,43039742-43039807,43039918-43040029
Length = 80
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = +2
Query: 119 CDRNKGQLCSGHGECV--CGKCSCSPEYTGPACQCLKDQTNCKS---PDNNEICSGNGKC 283
C N G C +C CG C S L D TN S +E+ + NG C
Sbjct: 4 CGGNCG--CGSSCQCGNGCGGCKYSEVEPTTTTTFLADATNKGSGAASGGSEMGAENGSC 61
Query: 284 VCGQCVC 304
C C C
Sbjct: 62 GCNTCKC 68
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 185 SPEYTGPACQCLKDQTNCKSPDNNEICSGNG 277
S E T P C C + +C + + NE G G
Sbjct: 832 SEETTAPECSCDNESASCSTTNKNEAECGVG 862
>04_03_0852 + 20289439-20289721,20289858-20290642
Length = 355
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 86 SGPFCECDNFTCDRNKGQLCSGHGECVCGKCSCSPEYTGPAC 211
SGP C + C R +C H C K C E TG C
Sbjct: 64 SGPDCTVEPRACPRGCRDMCYVH--CPTCKLVCLCELTGTEC 103
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 356 SDIVHSICRRNVYLLQHCKRIGRKHTFHYRCIFHYYLVIY 237
SD+ H IC + +H R+G K FH ++ IY
Sbjct: 371 SDLKHEICHWAAHY-EHKMRLGSKAIFHLEAFVAKFMSIY 409
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,336
Number of Sequences: 37544
Number of extensions: 421062
Number of successful extensions: 1366
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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