Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H23
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    29   0.025
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    26   0.31 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   6.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.6  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   6.6  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 29.5 bits (63), Expect = 0.025
 Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
 Frame = +2

Query: 260 ICSGNGKCVC--GQCVCNVGEDRHFSGKYCEQCPTCPGRCGEFK------DCVLCEVHKR 415
           +C G+GK     G C C  G       + C +CP      G+FK       C  C  H +
Sbjct: 233 LCKGDGKWYLPSGGCHCKPGYQADVEKQECTECP-----IGKFKHEAGSHSCEACPAHSK 287

Query: 416 GEKYIAANDTCMP 454
              Y      C P
Sbjct: 288 SSDYGFTECRCDP 300


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 470 GTVYIPACTCRSRLCTSHRVCAL 402
           G   IPACTC++  C    V A+
Sbjct: 308 GVTMIPACTCKAVACLDPYVYAI 330


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = -3

Query: 177 HFPQTHSPCPEH-SWPLFLSHVKLSHSQ 97
           H     SP PEH   P++ SH  L H Q
Sbjct: 54  HLMDLSSP-PEHRDLPIYQSHHHLHHHQ 80


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = -3

Query: 399 QSTQSLNSPQRPGHVGHCSQYLPEKCLSSPTLQTHWPQTHFP 274
           Q TQ + + Q+P       Q   ++       Q HWP    P
Sbjct: 429 QQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEP 470


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 569 INIYEQTILIVVETTTSVHLEIHR 498
           I +Y   +++++ T TS+ LEI R
Sbjct: 210 IMMYWFPLVVIIYTYTSILLEIRR 233


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 266 SGNGKCVCGQCVCNVGED 319
           SGN  C C  C+  + +D
Sbjct: 101 SGNVYCKCDDCLLGIVDD 118


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +2

Query: 35  ICGVCECNKMDDPLKVISGPFCECDNFTC 121
           +CG    N++D+ + + +   C   + TC
Sbjct: 138 LCGTTLQNRLDEAILIKNERICILKSITC 166


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 149 GHGECVCGKCSCSPEYTGPA 208
           GH +  C  CS  P  T P+
Sbjct: 383 GHWQMSCVACSPPPRQTPPS 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,797
Number of Sequences: 438
Number of extensions: 4377
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)