Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H20
(571 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 190 3e-47
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 186 4e-46
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 184 1e-45
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 154 2e-36
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 153 3e-36
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 143 3e-33
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 141 1e-32
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 136 3e-31
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 126 4e-28
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 123 3e-27
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 112 6e-24
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 105 1e-21
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 99 4e-20
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 89 5e-17
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 88 2e-16
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 69 8e-11
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 66 7e-10
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 61 2e-08
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 61 2e-08
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 60 3e-08
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 57 3e-07
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 55 1e-06
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 52 7e-06
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 52 7e-06
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellu... 42 0.013
UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.... 38 0.17
UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3; Bacteri... 35 1.5
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 2.7
UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, who... 34 2.7
UniRef50_Q9PA82 Cluster: 50S ribosomal protein L11; n=13; Proteo... 34 2.7
UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7; Haloba... 34 2.7
UniRef50_Q92J90 Cluster: 50S ribosomal protein L11; n=9; Bacteri... 33 3.6
UniRef50_A3SMF3 Cluster: Uncharacterized protein; n=2; Rhodobact... 29 4.2
UniRef50_Q4Q1Y0 Cluster: Putative uncharacterized protein; n=2; ... 33 6.2
UniRef50_UPI000050FCD5 Cluster: COG0714: MoxR-like ATPases; n=1;... 32 8.2
UniRef50_Q24C60 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2
UniRef50_A1CHQ6 Cluster: GNAT family acetyltransferase, putative... 32 8.2
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 190 bits (462), Expect = 3e-47
Identities = 88/111 (79%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKK+GDDIAKATSDWKGLKITV L +QNRQA ISVVPSAA+LII+ALKEPPRDRKKQKN
Sbjct: 180 SPKKIGDDIAKATSDWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKN 239
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNI ED++ IA++MRPRSMAR L G+ KE+LGTAQSVGCTV+G+ P
Sbjct: 240 IKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLGTAQSVGCTVDGKHP 290
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 186 bits (452), Expect = 4e-46
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 148
Score = 32.7 bits (71), Expect = 6.2
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 145 GRHPHDIIDDINSGAV 160
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 184 bits (448), Expect = 1e-45
Identities = 85/111 (76%), Positives = 100/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 70 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 129
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ I + MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 130 IKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 180
Score = 32.7 bits (71), Expect = 6.2
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 177 GRHPHDIIDDINSGAV 192
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 154 bits (373), Expect = 2e-36
Identities = 68/113 (60%), Positives = 89/113 (78%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKK+GDDIAK T WKGLKI V+L +QNRQA+I VVP++A+++++ L E PRDRKK KN
Sbjct: 50 SPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIEVVPTSASMVLKELNEAPRDRKKVKN 109
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPPMT 540
IKHNGN+ +E V IA+ M+ +S A+ G+VKEILGT S+GCTV+G+ P T
Sbjct: 110 IKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEILGTCNSIGCTVDGKKPTT 162
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 153 bits (371), Expect = 3e-36
Identities = 70/106 (66%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 SPKKVGDDIAKATS-DWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQK 378
SPKKVG+DIAK T+ DWKGL++TV+L VQNRQA++SVVP+A+AL+I+ALKEP +DRKK K
Sbjct: 100 SPKKVGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVK 159
Query: 379 NIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCT 516
I H GN +++D+I +A++MRP+S A+ L+G+VKEILGTA+SVGCT
Sbjct: 160 GITHTGNCSLDDIIEVARVMRPKSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 143 bits (346), Expect = 3e-33
Identities = 75/135 (55%), Positives = 96/135 (71%), Gaps = 24/135 (17%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDW------------------------KGLKITVQLIVQNRQAQISV 309
SPKK+G+DIAK T DW KGL++TV+L +QNRQA +SV
Sbjct: 38 SPKKIGEDIAKNTGDWVSTQYGCCDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSV 97
Query: 310 VPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEIL 489
VPSA++L+I+ALKEPPRDRKK+KNIKHN +I ++D+I IA+ MR RS+A+ L G+V EIL
Sbjct: 98 VPSASSLVIKALKEPPRDRKKEKNIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEIL 157
Query: 490 GTAQSVGCTVEGRPP 534
GTA SVGC V+GR P
Sbjct: 158 GTAFSVGCQVDGRSP 172
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 141 bits (341), Expect = 1e-32
Identities = 64/109 (58%), Positives = 81/109 (74%)
Frame = +1
Query: 208 KKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIK 387
KK+G+DIAK+T DWKGLK+T QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIK
Sbjct: 95 KKIGEDIAKSTKDWKGLKVTCQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIK 154
Query: 388 HNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
H+GNI +++ IAK P SM + V E+LGTA S+GCT++G P
Sbjct: 155 HDGNIAFSEILKIAKESAPNSMGASMKSVVMEVLGTAVSIGCTIDGEHP 203
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 136 bits (329), Expect = 3e-31
Identities = 64/112 (57%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
S K VG+DI KAT+D+K LK+ VQL +++R+A + V PS A LII++LKEPPRDRKK+KN
Sbjct: 38 SSKVVGEDIKKATADYKSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKN 97
Query: 382 IKHNGNITMEDVIGIAKIMR-PRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
I HNG++ M +V+ IA+I R RS + LSG+VKE+LGT +S+GC V+G+ P
Sbjct: 98 ILHNGSLRMTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCP 149
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 126 bits (304), Expect = 4e-28
Identities = 53/110 (48%), Positives = 84/110 (76%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
+PK+VGD I + WKG+++ V L QNR A ++V+P+++AL+I+ + RDRKK KN
Sbjct: 38 NPKQVGDKIIAESGKWKGIRVMVNLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRP 531
+KHNGN+T+E VI +A+ + +S+A+ +G+VK++LGTAQS+G TV+G+P
Sbjct: 98 VKHNGNLTLEQVIKVARAVEEKSLAKTFTGTVKQVLGTAQSLGATVDGQP 147
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 123 bits (297), Expect = 3e-27
Identities = 57/81 (70%), Positives = 71/81 (87%)
Frame = +1
Query: 292 QAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSG 471
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNIT ++++ IA+ MR RS+ R LSG
Sbjct: 171 QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLDRELSG 230
Query: 472 SVKEILGTAQSVGCTVEGRPP 534
++KE+LGTAQS+GC V+GR P
Sbjct: 231 TIKELLGTAQSLGCNVDGRHP 251
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 112 bits (269), Expect = 6e-24
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 131 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 105 bits (251), Expect = 1e-21
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 340 ALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTV 519
A KEPPRDRKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNV 233
Query: 520 EGRPP 534
+GR P
Sbjct: 234 DGRHP 238
Score = 32.7 bits (71), Expect = 6.2
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 235 GRHPHDIIDDINSGAV 250
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 99 bits (238), Expect = 4e-20
Identities = 46/106 (43%), Positives = 74/106 (69%)
Frame = +1
Query: 205 PKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNI 384
PK VG+ I +AT +KG+++ V+++ +NRQ +SVVP+A++L+++AL E PR K + +
Sbjct: 39 PKVVGEKIHEATQGYKGIRVKVRIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPL 98
Query: 385 KHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVE 522
H G + + V+ IAK +R S A +G+V E+LG+A+SVGC VE
Sbjct: 99 LHTGTVKFDTVLDIAKELRANSFALKYAGTVLEVLGSARSVGCKVE 144
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 89.4 bits (212), Expect = 5e-17
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +1
Query: 379 NIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
++KHNGNIT++DV +AK+MRPRSMAR+LSG+VKEILGT QSVGCTV+G P
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAP 118
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/67 (61%), Positives = 46/67 (68%)
Frame = -3
Query: 401 IFPLCLMFFCFLRSRGGSLRALMISAAAEGTTEICACLFCTINWTVILRPFQSLVALAMS 222
+ PLCL F F S GGS +A+M A+GTTE ACLF NWTV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 221 SPTFFGD 201
SPTFFGD
Sbjct: 61 SPTFFGD 67
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 68.9 bits (161), Expect = 8e-11
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +1
Query: 367 KKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
K QK+IKH+G+I+ ++ + MR RS+AR LSG++KEILGT+QSVGC V+G P
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDGCHP 125
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 65.7 bits (153), Expect = 7e-10
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Frame = +1
Query: 211 KVGDDIAKATSDWKGLKITVQLIV--QNRQAQISV-VPSAAALIIRALKEPPRDRKKQKN 381
+V +I + T D++G+++ V++IV + R+ +I V +P ALI + L + +
Sbjct: 34 QVVKEINEKTKDYEGMQVPVKVIVDTETRKFEIEVGIPPTTALIKKELGIETAAHEPRHE 93
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
+ GN+T+E VI IAK+ + ++ L +VKE+LGT S+G TVEG+ P
Sbjct: 94 VV--GNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDP 142
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +1
Query: 211 KVGDDIAKATSDWKGLKITVQLIVQN--RQAQISV-VPSAAALIIRALKEPPRDRKKQKN 381
+V I T D++G+ + V++IV R ++ V +P A+ALI + + ++ +
Sbjct: 34 QVVQKINNMTKDYEGMSVPVKVIVDTDKRTFEVEVGIPPASALIKKEIGIEKGSQEPKHQ 93
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
+ GNITME ++ IAK+ + +A L + KE++GT SVG +VEG P
Sbjct: 94 VA--GNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTP 142
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/108 (30%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +1
Query: 202 SPKKVGDDIAKATS-DWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQK 378
SPKK+G+D AK T +W G+ +T++L + + A + +VPS ++L+ R ++ +
Sbjct: 34 SPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNAYLKIVPSVSSLLKREMQLYGKPSV--- 90
Query: 379 NIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVE 522
+T + +I I+K ++ +S ++ G VKE+LGT S+G ++
Sbjct: 91 -------LTFKQLIKISKKVQTKSYSKAFKGVVKEVLGTCCSMGILID 131
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = +1
Query: 208 KKVGDDIAKATSDWKGLKI--TVQLIVQNRQAQISV-VPSAAALIIRALK-EPPRDRKKQ 375
KK+ D T+ +KG+ + T+++ ++ I V VP+ +L+++A+ + P
Sbjct: 37 KKIND----VTAQFKGMSVPVTIEIDSSTKKYDIKVGVPTTTSLLLKAINAQEPSGDPAH 92
Query: 376 KNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
K I GN+ +E + IA +P+ A+ L+ ++K +LGTA+S+G TVEG+ P
Sbjct: 93 KKI---GNLDLEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDP 142
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVV---PSAAALIIRALKEPPRDRKK 372
+P KV +I K T +++GL + V++I+ + ++ P +AL+++A R
Sbjct: 31 NPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYKIIVGLPPTSALLMKAAGVT---RGP 87
Query: 373 QKNIKH-NGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
Q+ + GN++M+DV+ IAK L +VK +LGTA++ G VE + P
Sbjct: 88 QRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDP 142
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 54.8 bits (126), Expect = 1e-06
Identities = 35/106 (33%), Positives = 50/106 (47%)
Frame = -2
Query: 522 LHSASNRLCCAKDFFY*A*EVTCH*TRTHYLGNANDIFHCDISIVFNXXXXXXXXXXLFE 343
++ A++RL +D F + E + H N +++ D+S V E
Sbjct: 6 INVAAHRLGSPQDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLE 65
Query: 342 SSDD*CSCRGHH*NLRLSVLHYQLDRDLETLPVTSGFSDVITNLFW 205
DD R +H NL LSVL Q D +TLP+TS DVI +LFW
Sbjct: 66 GFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFW 111
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 52.4 bits (120), Expect = 7e-06
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = -2
Query: 522 LHSASNRLCCAKDFFY*A*EVTCH*TRTHYLGNANDIFHCDISIVFNXXXXXXXXXXLFE 343
+++ ++ L +DF +V +H L N +D+F ++ VF+ +
Sbjct: 37 VNTTTDGLSSTQDFLGDRSQVLTERLFSHLLSNFDDVFQLQVTTVFDVLVLLSVSWWFLQ 96
Query: 342 SSDD*CSCRGHH*NLRLSVLHYQLDRDLETLPVTSGFSDVITNLFWG 202
S D+ ++ + LSVL QL+ +L+TL + G D+ TNL WG
Sbjct: 97 SGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGDIFTNLLWG 143
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 52.4 bits (120), Expect = 7e-06
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Frame = +1
Query: 211 KVGDDIAKATSDWKGLKITVQLIV---QNRQAQISV-VPSAAALIIRALKEPPRDRKKQK 378
+V +I + T +++G+++ V + V + ++ +I+V VP +AL+ + L KK++
Sbjct: 33 QVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGVPPTSALLKKELGLEKGASKKKE 92
Query: 379 NIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
+ GN T+E + +A P +A+ L +V E+LGT ++G VEG+ P
Sbjct: 93 AVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDP 142
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQL 276
SPKK+GDDIAK T WKGLKI V+L
Sbjct: 59 SPKKIGDDIAKETQSWKGLKICVKL 83
>UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellular
organisms|Rep: 50S ribosomal protein L11 -
Corynebacterium efficiens
Length = 144
Score = 41.5 bits (93), Expect = 0.013
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +1
Query: 235 ATSDWKGLKITVQLIV-QNRQAQISV-VPSAAALIIRALKEPPRDRKKQKNIKHN---GN 399
AT + +G + V++ V ++R + P AA L+++A +K + H G
Sbjct: 48 ATENQRGNVVPVEITVYEDRSFDFKLKTPPAAKLLLKAA-----GLQKGSGVPHTNKVGK 102
Query: 400 ITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEG 525
+TM+ + IA+ + AR + + K I GTA+S+G TVEG
Sbjct: 103 VTMDQIREIAETKKEDLNARDIDAAAKIIAGTARSMGITVEG 144
>UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.
CcI3|Rep: Ribosomal protein L11 - Frankia sp. (strain
CcI3)
Length = 165
Score = 37.9 bits (84), Expect = 0.17
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +1
Query: 232 KATSDWKGLKITVQL-IVQNRQAQISVV-PSAAALIIRALKEPPRDRKKQKNIKHNGNIT 405
+A++ GL+++ + I ++R ++SV P+ +L+++A R + + +H G +T
Sbjct: 68 EASAIHHGLQVSADVSIFEDRSFELSVKSPATTSLLLQAAGV--RKGSPRPHAEHAGAVT 125
Query: 406 MEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEG 525
+ + IAK+ P + + K + GTA+S+G V G
Sbjct: 126 VSQLREIAKVKLPDLNVDSMEAAEKIVAGTARSMGIKVTG 165
>UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3;
Bacteria|Rep: 50S ribosomal protein L11 - Salinibacter
ruber (strain DSM 13855)
Length = 146
Score = 34.7 bits (76), Expect = 1.5
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = +1
Query: 238 TSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDV 417
T D G + V++ V ++ +V S A ++ K G +T +D
Sbjct: 46 TEDRMGTLLPVEITVYADRSFDFIVKSPPASVLLKQKADIETAAGDPLRDDAGTVTWDDC 105
Query: 418 IGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRP 531
+ IA A + + GTA+S+G TVEG+P
Sbjct: 106 LDIADQKLQDLNAHTVEKGASMVAGTARSMGITVEGKP 143
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 2.7
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 199 QSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQK 378
+SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++K
Sbjct: 535 ESPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREK 593
Query: 379 NIKHNGNI 402
N+++ N+
Sbjct: 594 NLEYGSNV 601
>UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 169
Score = 33.9 bits (74), Expect = 2.7
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 253 GLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHN 393
GLK+ ++ + + Q SV+ + AL+I A + PR+++KQK ++ N
Sbjct: 77 GLKLILENMPKEVQRNQSVIRNFLALLIHARLQQPRNKQKQKKLRLN 123
>UniRef50_Q9PA82 Cluster: 50S ribosomal protein L11; n=13;
Proteobacteria|Rep: 50S ribosomal protein L11 - Xylella
fastidiosa
Length = 142
Score = 33.9 bits (74), Expect = 2.7
Identities = 24/92 (26%), Positives = 42/92 (45%)
Frame = +1
Query: 250 KGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIA 429
+GL I V + + + + + A I+ + K+ N + G +T + + IA
Sbjct: 51 QGLPIPVVITAYSDRTFTFITKTPPASILLKKIVGIQSGSKRPNTEKVGKVTRKQLEDIA 110
Query: 430 KIMRPRSMARYLSGSVKEILGTAQSVGCTVEG 525
K A L +V+ I G+A+S+G VEG
Sbjct: 111 KTKELDMTAADLDAAVRTIAGSARSMGLVVEG 142
>UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7;
Halobacteriaceae|Rep: 50S ribosomal protein L11P -
Halobacterium salinarium (Halobacterium halobium)
Length = 163
Score = 33.9 bits (74), Expect = 2.7
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 214 VGDDIAKATSDWKGLKITVQLIVQNRQA-QISV-VPSAAALIIRALKEPPRDRKKQKNIK 387
V +I T + G ++ V + ++ + I V VP AAL+ + Q+N
Sbjct: 34 VVQEINDQTEAFDGTEVPVTIEYEDDGSFSIEVGVPPTAALVKDEAGFDTGSGEPQENFV 93
Query: 388 HNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPPMT 540
++++E + IA+ +P +A + KE+ GT S+G T+EG T
Sbjct: 94 --ADLSIEQLKTIAEQKKPDLLAYDARNAAKEVAGTCASLGVTIEGEDART 142
>UniRef50_Q92J90 Cluster: 50S ribosomal protein L11; n=9;
Bacteria|Rep: 50S ribosomal protein L11 - Rickettsia
conorii
Length = 145
Score = 33.5 bits (73), Expect = 3.6
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 250 KGLKI-TVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGI 426
KG+ + TV + ++ + A+ ++ + + K G +TM+D I
Sbjct: 52 KGIPLPTVITVYEDSSFSFKIKTPPASYFLKKYAKITKGSSATKKEAVVGKVTMDDCREI 111
Query: 427 AKIMRPRSMARYLSGSVKEILGTAQSVGCTVEG 525
AK+ P + + + K I G+A S+G V G
Sbjct: 112 AKLKMPDLNTKNIEAATKIICGSAASMGLEVVG 144
>UniRef50_A3SMF3 Cluster: Uncharacterized protein; n=2;
Rhodobacteraceae|Rep: Uncharacterized protein -
Roseovarius nubinhibens ISM
Length = 326
Score = 28.7 bits (61), Expect(2) = 4.2
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = +1
Query: 118 LPCFPANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQA 297
+P F A T++ H + ++ + PK +GDD+A +W + + +++ +
Sbjct: 231 VPGFDAPTAASLGHPELNQLVGWTGLA-GPKDLGDDVAAKWGEWMATAVADETFLKSMEE 289
Query: 298 QISVV 312
+ SV+
Sbjct: 290 RGSVI 294
Score = 23.4 bits (48), Expect(2) = 4.2
Identities = 9/41 (21%), Positives = 17/41 (41%)
Frame = +1
Query: 403 TMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEG 525
+ME+ + ++M P ++ G +G VEG
Sbjct: 286 SMEERGSVIRLMSPEETGEFIEGQYNTFRALVDKLGMRVEG 326
>UniRef50_Q4Q1Y0 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 851
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -3
Query: 419 MTSSIVIFPLCLMFFCFLRSRGGSLRALMISAAAEGTT 306
+ +S+ + +CL + CFLRSR + AL ++ AA+GTT
Sbjct: 125 LRASVGLHTVCLGYNCFLRSRLSGVSAL-VANAAQGTT 161
>UniRef50_UPI000050FCD5 Cluster: COG0714: MoxR-like ATPases; n=1;
Brevibacterium linens BL2|Rep: COG0714: MoxR-like
ATPases - Brevibacterium linens BL2
Length = 348
Score = 32.3 bits (70), Expect = 8.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 394 GNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEG 525
G++ +EDV G+ K + R+M + + GSV+ I T + V G
Sbjct: 74 GHVLLEDVPGVGKTLLARAMGKVVDGSVRRIQFTPDLLPTDVVG 117
>UniRef50_Q24C60 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1243
Score = 32.3 bits (70), Expect = 8.2
Identities = 19/95 (20%), Positives = 41/95 (43%)
Frame = +1
Query: 130 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 309
P Y + + + NF +Q ++ + ++G ++ Q++Q QIS+
Sbjct: 1053 PQEVKEKYKYKRTPSLTQFNFCNQQSNLQIQPLSNKNTSFEGFNFNIKNCQQSQQQQISL 1112
Query: 310 VPSAAALIIRALKEPPRDRKKQKNIKHNGNITMED 414
A L I+ ++ +D++ + HN +T D
Sbjct: 1113 FQDAIDLNIQN-QQYQKDQQSSEEQNHNNQLTKID 1146
>UniRef50_A1CHQ6 Cluster: GNAT family acetyltransferase, putative;
n=1; Aspergillus clavatus|Rep: GNAT family
acetyltransferase, putative - Aspergillus clavatus
Length = 225
Score = 32.3 bits (70), Expect = 8.2
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +1
Query: 289 RQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLS 468
R A + P+ A + I + + P R +N+ I M+ G++K+ PR+ +
Sbjct: 4 RYATEADTPTLAEINIVSFQHGPFYRATFRNVDPRVAIPMKHARGLSKLTNPRTHLLVAT 63
Query: 469 GSVKEILGTAQ 501
+ ++ILGTA+
Sbjct: 64 DAAEQILGTAR 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,296,322
Number of Sequences: 1657284
Number of extensions: 11138618
Number of successful extensions: 30177
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 29223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30168
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -