Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H20
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 186 6e-47
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 186 6e-47
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 186 6e-47
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 186 6e-47
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 186 6e-47
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 184 2e-46
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 176 5e-44
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 126 7e-29
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 35 0.23
AL354798-8|CAI16639.1| 95|Homo sapiens protein ( Human DNA seq... 31 3.8
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 186 bits (452), Expect = 6e-47
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 148
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 145 GRHPHDIIDDINSGAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 186 bits (452), Expect = 6e-47
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 148
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 145 GRHPHDIIDDINSGAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 186 bits (452), Expect = 6e-47
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 148
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 145 GRHPHDIIDDINSGAV 160
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 186 bits (452), Expect = 6e-47
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 148
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 145 GRHPHDIIDDINSGAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 186 bits (452), Expect = 6e-47
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 148
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 145 GRHPHDIIDDINSGAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 184 bits (448), Expect = 2e-46
Identities = 85/111 (76%), Positives = 100/111 (90%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 70 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 129
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKH+GNIT ++++ I + MR RS+AR LSG++KEILGTAQSVGC V+GR P
Sbjct: 130 IKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP 180
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 177 GRHPHDIIDDINSGAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 176 bits (428), Expect = 5e-44
Identities = 81/111 (72%), Positives = 98/111 (88%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKKVGDDIAKAT DWKGL+ITV+L ++NRQAQI VVPSA+A II+ALK+PPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
IKHNGNIT ++++ IA+ MR RS+AR LSG++KEI GTAQS+GC V+G P
Sbjct: 98 IKHNGNITFDEIVNIARQMRHRSLARELSGTIKEIPGTAQSMGCNVDGHHP 148
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G PHDIIDDINSGA+
Sbjct: 145 GHHPHDIIDDINSGAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 126 bits (303), Expect = 7e-29
Identities = 58/78 (74%), Positives = 70/78 (89%)
Frame = +1
Query: 301 ISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVK 480
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++K
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 481 EILGTAQSVGCTVEGRPP 534
EILGTAQSVGC V+GR P
Sbjct: 98 EILGTAQSVGCNVDGRHP 115
Score = 32.7 bits (71), Expect = 0.94
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 522 GQAPHDIIDDINSGAL 569
G+ PHDIIDDINSGA+
Sbjct: 112 GRHPHDIIDDINSGAV 127
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 226 IAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIR--ALKEPPRDRKKQ-KNIKHNG 396
I++ DWKG+ +T Q QI ++ A+L IR L EP + RK K I
Sbjct: 429 ISRKFIDWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMA 488
Query: 397 NITMEDVIGIAK 432
++T D++ I +
Sbjct: 489 SLTFGDILPITQ 500
>AL354798-8|CAI16639.1| 95|Homo sapiens protein ( Human DNA
sequence from clone RP11-756A22 on chromosome 13
Contains the 3' end of a novel gene, the CENJP gene for
centromere protein J ).
Length = 95
Score = 30.7 bits (66), Expect = 3.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 538 SWGACPPQCIQQIVLCQGFLLLSLRGNVPLNEDALSWQCQ*HLPL*YF 395
++G C P C+Q I C+GF+ + + +N+ + Q +LP YF
Sbjct: 27 NYGLCLPYCLQNIFNCRGFIYQEMNWIIHINKKLGKFIHQ-NLPWRYF 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,820,589
Number of Sequences: 237096
Number of extensions: 1799861
Number of successful extensions: 8500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8497
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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