Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H20
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 175 1e-44
Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical p... 58 6e-09
Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 28 4.1
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 175 bits (427), Expect = 1e-44
Identities = 78/111 (70%), Positives = 99/111 (89%)
Frame = +1
Query: 202 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 381
SPKK+G+DIAKAT DWKGLK+T +L +QNR A+I VVPSAA+LI++ LKEPPRDRKK KN
Sbjct: 38 SPKKIGEDIAKATQDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKN 97
Query: 382 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
+KHNG++T++ +I IA+IMRPRSMA+ L G+VKEILGTAQSVGCT++G+ P
Sbjct: 98 VKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHP 148
>Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical
protein JC8.3c protein.
Length = 50
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = +1
Query: 436 MRPRSMARYLSGSVKEILGTAQSVGCTVEGRPP 534
MRPRSMA+ L G+VKEILGTAQSVGCT++G+ P
Sbjct: 1 MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHP 33
>Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 29.9 bits (64), Expect = 1.3
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 130 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 309
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 310 VPSAAALIIRALKEPPRDRKKQKNIK--HNGNITMEDVIGIAKIMRPRSMARYLSGSVKE 483
V +AA R + D K I N ++ EDV+ I + MA S + K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 484 ILGTAQSV 507
+ +++
Sbjct: 410 LKEALETI 417
>Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 29.9 bits (64), Expect = 1.3
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 130 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 309
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 310 VPSAAALIIRALKEPPRDRKKQKNIK--HNGNITMEDVIGIAKIMRPRSMARYLSGSVKE 483
V +AA R + D K I N ++ EDV+ I + MA S + K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 484 ILGTAQSV 507
+ +++
Sbjct: 410 LKEALETI 417
>Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 29.9 bits (64), Expect = 1.3
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 130 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 309
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 310 VPSAAALIIRALKEPPRDRKKQKNIK--HNGNITMEDVIGIAKIMRPRSMARYLSGSVKE 483
V +AA R + D K I N ++ EDV+ I + MA S + K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 484 ILGTAQSV 507
+ +++
Sbjct: 410 LKEALETI 417
>Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 29.9 bits (64), Expect = 1.3
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 130 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 309
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 310 VPSAAALIIRALKEPPRDRKKQKNIK--HNGNITMEDVIGIAKIMRPRSMARYLSGSVKE 483
V +AA R + D K I N ++ EDV+ I + MA S + K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 484 ILGTAQSV 507
+ +++
Sbjct: 410 LKEALETI 417
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 407 IVIFPLCLMFFCFLRS 360
+VIF +CL+ FCFLR+
Sbjct: 613 LVIFLMCLLVFCFLRN 628
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,441,293
Number of Sequences: 27780
Number of extensions: 262022
Number of successful extensions: 561
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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