Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H18
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.30 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            28   0.30 
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    24   3.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 376  GDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQA-ALQVVENM 522
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q  ALQ+  N+
Sbjct: 876  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 925


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 376  GDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQA-ALQVVENM 522
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q  ALQ+  N+
Sbjct: 877  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 926


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 520 MSTPVDLNDEDALLKAAATSLNSKVVSQHSTILAPIA 630
           +STP+D +D  A    A   +   VV+  +   AP+A
Sbjct: 255 VSTPMDKDDPAAAAAPATAEVPGAVVANPAATSAPLA 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.130    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,146
Number of Sequences: 2352
Number of extensions: 10516
Number of successful extensions: 60
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)