Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H18
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 227 5e-60
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 168 2e-42
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 154 6e-38
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 153 1e-37
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 142 2e-34
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 136 1e-32
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 126 1e-29
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 124 5e-29
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 116 1e-26
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 103 1e-22
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 71 9e-13
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 69 4e-12
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 68 5e-12
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 68 5e-12
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 66 3e-11
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 63 1e-10
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 62 4e-10
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 58 7e-09
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 58 7e-09
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 54 1e-07
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 39 0.003
At2g43040.1 68415.m05341 calmodulin-binding protein similar to p... 30 1.6
At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A... 29 2.7
At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A... 29 3.6
At1g65410.1 68414.m07421 ABC transporter family protein contains... 28 4.8
At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransfera... 28 6.3
At4g37410.1 68417.m05296 cytochrome P450, putative similar to cy... 27 8.3
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 227 bits (555), Expect = 5e-60
Identities = 109/173 (63%), Positives = 139/173 (80%)
Frame = +1
Query: 139 YKDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSV 318
+ D + DIR +NIN+A+AVSDA+RTSLGP+GMDKMI +NGEV ITNDGATIL +M V
Sbjct: 20 FVDNKRREDIRFANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEV 79
Query: 319 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQA 498
+ PAAKMLVELS++QD AGDGTT+VVVIAGALL + LL GIHPTVISD KA
Sbjct: 80 LQPAAKMLVELSKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGK 139
Query: 499 ALQVVENMSTPVDLNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
A+ ++ M+ PV+L D D+L+K+A+TSLNSKVVSQ+ST+LAP+AV A+ +V++
Sbjct: 140 AIDILTAMAVPVELTDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVID 192
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 168 bits (409), Expect = 2e-42
Identities = 84/174 (48%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Frame = +1
Query: 142 KDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVI 321
K + + D + +NI A KAV+ +R+SLGP+GMDKM+Q +G++TITNDGATIL+QM V
Sbjct: 21 KTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVD 80
Query: 322 HPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAA 501
+ AK++VELSR+QD E GDGTT VVV+AGALL+ AE+ L +GIHP I++G++ A + A
Sbjct: 81 NQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVA 140
Query: 502 LQVVENMST--PVDLNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
++ +E ++ D+N+ + L++ T+L+SK+V++ LA IAV+A+ AV +
Sbjct: 141 VEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVAD 194
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 154 bits (373), Expect = 6e-38
Identities = 72/158 (45%), Positives = 106/158 (67%)
Frame = +1
Query: 178 NINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSR 357
NI A+KAV+D IRT+LGPR M KM+ + G + +TNDG IL+++ V HPAAK ++ELSR
Sbjct: 24 NIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83
Query: 358 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVD 537
QD E GDGTTSV+V+AG +L AE L+K HPTVI + KAL+ ++ V++ ++ +D
Sbjct: 84 TQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKIAMSID 143
Query: 538 LNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 651
+ND +L + + +K SQ ++A +A+ A V
Sbjct: 144 INDRSQVLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 181
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 153 bits (370), Expect = 1e-37
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Frame = +1
Query: 145 DKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIH 324
D+ D+R N+ A +AVS+ ++TSLGP G+DKM+ G+VTITNDGATIL+ + V H
Sbjct: 13 DRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEH 72
Query: 325 PAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAAL 504
PAAK+LVEL+ QD E GDGTTSVV++A LL A L++ IHPT I G++ A++ +
Sbjct: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESC 132
Query: 505 QVV-ENMSTPVDLNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 651
+ + E + T V+ + L+ A TS++SK++S S A + V+A+ +V
Sbjct: 133 KYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSV 182
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 142 bits (344), Expect = 2e-34
Identities = 68/164 (41%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Frame = +1
Query: 172 LSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVEL 351
+SNINA AV D +RT+LGPRGMDK+I G VTI+NDGATI+K + ++HPAAK+LV++
Sbjct: 26 VSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIMKLLDIVHPAAKILVDI 85
Query: 352 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTP 531
+++QD E GDGTT+VV++A L A+ ++ G+H + ++ A A+ V+ ++
Sbjct: 86 AKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYRTASTLAIAKVKELAVS 145
Query: 532 VD---LNDEDALL-KAAATSLNSKVVSQHSTILAPIAVQAIRAV 651
++ + ++ LL K AAT+L+SK++ A + V A+ A+
Sbjct: 146 IEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAI 189
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 136 bits (329), Expect = 1e-32
Identities = 77/179 (43%), Positives = 115/179 (64%), Gaps = 10/179 (5%)
Frame = +1
Query: 136 VYKD---KSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNG--EVTITNDGATI 300
++KD + K R+++ A A+SD ++++LGP+GMDK++Q++ VT+TNDGATI
Sbjct: 6 IFKDDASEEKGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATI 65
Query: 301 LKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGF 480
LK + + +PAAK+LV++S+ QD E GDGTTSVVV+AG LL AEKL+ IHP I G+
Sbjct: 66 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGY 125
Query: 481 QKALQAA-----LQVVENMSTPVDLNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAI 642
+ A + A +V++N + LLK A T+L SK++SQ A +AV A+
Sbjct: 126 RMASECARNALLKRVIDNKDNAEKFRSD--LLKIAMTTLCSKILSQDKEHFAEMAVDAV 182
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 126 bits (305), Expect = 1e-29
Identities = 61/160 (38%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Frame = +1
Query: 181 INAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSRA 360
INAAK + D ++++LGP+G KM+ +G++ +T DG T+LK+M + +P A M+ + A
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 361 QDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDL 540
QD +GDGTTS V+ G L+ +E+ + +G+HP V+ DGF+ A +A LQ ++N TPV +
Sbjct: 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLDNFKTPVVM 142
Query: 541 NDE---DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 651
DE + L A T+L +K+ + L I V ++ +
Sbjct: 143 GDEVDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLCI 182
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 124 bits (299), Expect = 5e-29
Identities = 60/160 (37%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Frame = +1
Query: 181 INAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSRA 360
INAAK + D ++++LGP+G KM+ +G++ +T DG T+LK+M + +P A M+ + A
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
Query: 361 QDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDL 540
QD +GDGTTS V+ G L+ +E+ + +G+HP V+ DGF+ A +A LQ ++ TPV +
Sbjct: 83 QDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLDTFKTPVVM 142
Query: 541 NDE---DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 651
DE + L A T+L +K+ + L I V ++ +
Sbjct: 143 GDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLCI 182
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 116 bits (280), Expect = 1e-26
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Frame = +1
Query: 139 YKDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSV 318
Y+ S + + NI A K +S RTSLGP GM+KM+ ++ +TND ATI+ ++ +
Sbjct: 19 YRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEI 78
Query: 319 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQA 498
HPAAK+LV ++AQ E GDG + AG LL +AE+L++ G+HP+ I G+ KA+
Sbjct: 79 QHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKAVSK 138
Query: 499 ALQVVENM----STPVDLNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAIR 645
A++++E + S +D+ ++D ++ ++ SK Q I + + I+
Sbjct: 139 AVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEIICSLVTDACIQ 191
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 103 bits (247), Expect = 1e-22
Identities = 53/118 (44%), Positives = 84/118 (71%), Gaps = 2/118 (1%)
Frame = +1
Query: 310 MSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKA 489
M V + AK++VELSR+QD E GDGTT VVV+AGALL+ AE+ L +GIHP I++G++ A
Sbjct: 1 MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMA 60
Query: 490 LQAALQVVENMST--PVDLNDEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
+ A++ +E ++ D+N+ + L++ T+L+SK+V++ LA IAV+A+ AV +
Sbjct: 61 SRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVAD 118
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 70.5 bits (165), Expect = 9e-13
Identities = 41/157 (26%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Frame = +1
Query: 199 VSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 366
++D + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTN 133
Query: 367 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDLND 546
AGDGTT+ VV+A L+ K++ G +P +I+ G +K +A + ++ MS V+ +
Sbjct: 134 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAELKKMSKEVE-DS 192
Query: 547 EDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
E A + A + N +V + + +A + + + + E
Sbjct: 193 ELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEE 229
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/157 (25%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Frame = +1
Query: 199 VSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 366
++D + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 133
Query: 367 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDLND 546
AGDGTT+ VV+A + K++ G +P +I+ G +K +A + ++ MS V+ +
Sbjct: 134 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMSKEVE-DS 192
Query: 547 EDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
E A + A + N +V S + ++ + + + + E
Sbjct: 193 ELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEE 229
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/157 (24%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Frame = +1
Query: 199 VSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 366
++D + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 137
Query: 367 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDLND 546
AGDGTT+ VV+A + K++ G +P +I+ G +K +A + ++ MS V+ +
Sbjct: 138 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVE-DS 196
Query: 547 EDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
E A + A + N ++ + + ++ + + + + E
Sbjct: 197 ELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEE 233
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 68.1 bits (159), Expect = 5e-12
Identities = 38/157 (24%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Frame = +1
Query: 199 VSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQD 366
++D + +LGP+G + ++++ G I NDG T+ +++ + P AK++ + + +
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 137
Query: 367 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDLND 546
AGDGTT+ VV+A + K++ G +P +I+ G +K +A + ++ MS V+ +
Sbjct: 138 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVE-DS 196
Query: 547 EDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 657
E A + A + N ++ + + ++ + + + + E
Sbjct: 197 ELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEE 233
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Frame = +1
Query: 190 AKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDI 369
A V+ + +LGP+G + ++Q G I NDG T+LK++ + P + V+L R
Sbjct: 59 ADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGA 118
Query: 370 E----AGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVD 537
+ AGDG+T+ +++A L+ K++ G +P ++ G +K +A + +++MS ++
Sbjct: 119 KTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKTTKALVLELKSMSREIE 178
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = +1
Query: 142 KDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMSVI 321
KD S R + + V++A++ ++GP+G + +I++S G IT DG T+ K +S
Sbjct: 34 KDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQ 93
Query: 322 HPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKA 489
A A+++ +++ A + AGDGTT V+ A+L K + G++ + G A
Sbjct: 94 AKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSVAAGVNVMDLRVGINMA 153
Query: 490 LQAALQVVENMSTPVDLNDEDALLKAAATSLNSK 591
+ A + +++ + + +E + + A S N +
Sbjct: 154 IAAVVSDLKSRAVMISTPEE--ITQVATISANGE 185
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 61.7 bits (143), Expect = 4e-10
Identities = 34/130 (26%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +1
Query: 199 VSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM----SVIHPAAKMLVELSRAQD 366
++DA+ +LGPRG + ++ A + + NDG TI K + ++ + A ++ E++ +
Sbjct: 55 LADAVSITLGPRGRN-VVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMN 113
Query: 367 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVD-LN 543
AGDGTT+ +++A ++ + + G + + +G K ++ ++V++ S PV N
Sbjct: 114 ESAGDGTTTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLQMKSIPVQGKN 173
Query: 544 DEDALLKAAA 573
D A+ +A
Sbjct: 174 DIKAVASISA 183
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/135 (22%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = +1
Query: 163 DIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM----SVIHPA 330
+ R + + ++DA++ ++GP+G + +I+ S G +T DG T+ K + + +
Sbjct: 41 EARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVG 100
Query: 331 AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQV 510
A ++ +++ A + AGDGTT V+ A+ K + G++ + G A+ A +
Sbjct: 101 ASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTN 160
Query: 511 VENMSTPVDLNDEDA 555
+++ + + ++E A
Sbjct: 161 LKSKARMISTSEEIA 175
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Frame = +1
Query: 142 KDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMS-- 315
KD + R + + ++DA++ ++GP+G + +I+ S G +T DG T+ K +
Sbjct: 35 KDIRFGVEARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFK 94
Query: 316 --VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKA 489
+ + A ++ +++ A + AGDGTT V+ A+ K + G++ + G + A
Sbjct: 95 DRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLA 154
Query: 490 LQAALQVVENMSTPVDLNDEDA 555
+ + +++ + + ++E A
Sbjct: 155 VDTVVTNLQSRARMISTSEEIA 176
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Frame = +1
Query: 199 VSDAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM----SVIHPAAKMLVELSRAQD 366
++D + +LGPRG + ++ G + NDG TI + + ++ + A ++ E++ +
Sbjct: 68 LADCVGLTLGPRGRNVVLDEF-GSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTN 126
Query: 367 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQAALQVVENMSTPVDLND 546
AGDGTT+ ++A ++ + G +P + G K +Q ++ ++ + PV D
Sbjct: 127 DSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKARPVKGRD 186
Query: 547 E 549
+
Sbjct: 187 D 187
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1
Query: 142 KDKSKPTDIRLSNINAAKAVSDAIRTSLGPRGMDK 246
K + K D + +NI+A KAV+ +R+SLGP+GM+K
Sbjct: 21 KTRLKGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At2g43040.1 68415.m05341 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]; contains Pfam profile
PF00515: TPR Domain
Length = 704
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 307 QMSVIHPAAKMLVELS--RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGF 480
Q SV AA +++E +A+ ++ T ++LDS EK+ Q+GI + +
Sbjct: 113 QQSVSQHAANLVLEAIYLKAKSLQKLGRITEAAHECKSVLDSVEKIFQQGIPDAQVDNKL 172
Query: 481 QKALQAALQVV 513
Q+ + A++++
Sbjct: 173 QETVSHAVELL 183
>At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A
(PP2A) 65 kDa regulatory subunit, putative similar to
protein phosphatase 2A 65 kDa regulatory subunit
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 410 PAMTTTEVVPSPASIS*ARDSSTNILAAGWITLICLRIVAPSFVI 276
P T T++VP+ A + ++ I AAG +T C RI+ P I
Sbjct: 274 PEPTRTDLVPAYARLLCDNEAEVRIAAAGKVTKFC-RILNPELAI 317
>At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A
(PP2A) 65 KDa regulatory subunit A identical to protein
phosphatase 2A 65 kDa regulatory subunit (pDF1)
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 410 PAMTTTEVVPSPASIS*ARDSSTNILAAGWITLICLRIVAPSFVI 276
P T TE+VP+ + ++ I AAG +T C RI+ P I
Sbjct: 274 PEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFC-RILNPEIAI 317
>At1g65410.1 68414.m07421 ABC transporter family protein contains
similarity to toluene tolerance protein Ttg2A GI:4336798
from [Pseudomonas putida]
Length = 345
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 499 ALQVVENMSTPVDLNDEDALLKAAATSLNSKVVSQHSTI 615
A VVE++ V + DEDA+ K + V QHSTI
Sbjct: 261 ASTVVEDLIRSVHMTDEDAVGKPGKIASYLVVTHQHSTI 299
>At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransferase,
putative similar to Swiss-Prot:P05055 polyribonucleotide
nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide
phosphorylase) (PNPase) [Escherichia coli]
Length = 991
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 193 KAVSDAIRTSLGPRG-MDKMIQASNG-EVTITNDGATILKQMSVIHPAAKMLVELSRAQD 366
K +D++RT +GP G + + I+ G ++I N TI+ + + A+ V+ ++
Sbjct: 615 KYSNDSLRTLIGPMGVLKRKIEVETGARLSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRE 674
Query: 367 IEAG---DGTTSVVVIAGALLD 423
+ G GT S + GA ++
Sbjct: 675 LVVGGVYKGTVSSIKEYGAFVE 696
>At4g37410.1 68417.m05296 cytochrome P450, putative similar to
cytochrome p450 SP:O65790 from [Arabidopsis thaliana]
Length = 501
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 235 GMDKMIQASNGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAG 378
G D++I+ S ++ ++ + +HPAA +LV S A+DI+ G
Sbjct: 332 GQDRLIEES--DIANLPYLQNVVSETLRLHPAAPVLVPRSTAEDIKIG 377
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.130 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,600,071
Number of Sequences: 28952
Number of extensions: 210206
Number of successful extensions: 648
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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