Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H15
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127603-1|AAI27604.1|  829|Homo sapiens kinase suppressor of ra...    31   2.9  
BC107107-1|AAI07108.1|  827|Homo sapiens KSR2 protein protein.         31   2.9  
BC107106-1|AAI07107.1|  827|Homo sapiens KSR2 protein protein.         31   2.9  
AY345972-1|AAQ24226.1|  829|Homo sapiens kinase suppressor of Ra...    31   2.9  
AK098831-1|BAC05426.1|  439|Homo sapiens protein ( Homo sapiens ...    31   2.9  
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot...    31   5.1  
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro...    31   5.1  
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot...    31   5.1  

>BC127603-1|AAI27604.1|  829|Homo sapiens kinase suppressor of ras 2
           protein.
          Length = 829

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 136 HYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRPI 26
           HY+K K Q I+P  +  P+T    P +I+  +   PI
Sbjct: 444 HYYKYKQQFIFPDVVPVPETPTRAPQVILHPVTSNPI 480


>BC107107-1|AAI07108.1|  827|Homo sapiens KSR2 protein protein.
          Length = 827

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 136 HYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRPI 26
           HY+K K Q I+P  +  P+T    P +I+  +   PI
Sbjct: 442 HYYKYKQQFIFPDVVPVPETPTRAPQVILHPVTSNPI 478


>BC107106-1|AAI07107.1|  827|Homo sapiens KSR2 protein protein.
          Length = 827

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 136 HYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRPI 26
           HY+K K Q I+P  +  P+T    P +I+  +   PI
Sbjct: 442 HYYKYKQQFIFPDVVPVPETPTRAPQVILHPVTSNPI 478


>AY345972-1|AAQ24226.1|  829|Homo sapiens kinase suppressor of Ras-2
           protein.
          Length = 829

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 136 HYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRPI 26
           HY+K K Q I+P  +  P+T    P +I+  +   PI
Sbjct: 444 HYYKYKQQFIFPDVVPVPETPTRAPQVILHPVTSNPI 480


>AK098831-1|BAC05426.1|  439|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25965 fis, clone TST04647. ).
          Length = 439

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 136 HYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRPI 26
           HY+K K Q I+P  +  P+T    P +I+  +   PI
Sbjct: 262 HYYKYKQQFIFPDVVPVPETPTRAPQVILHPVTSNPI 298


>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 148 QKGLHYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRP 29
           + G+ Y KL L+L+     A P+T  +GP L++  L+L P
Sbjct: 684 EPGISY-KLHLKLVRTGGSAQPETPYSGPGLLIDSLVLLP 722


>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 148 QKGLHYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRP 29
           + G+ Y KL L+L+     A P+T  +GP L++  L+L P
Sbjct: 684 EPGISY-KLHLKLVRTGGSAQPETPYSGPGLLIDSLVLLP 722


>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 148 QKGLHYFKLKLQLIYPSALASPKTAIAGPALIMPFLMLRP 29
           + G+ Y KL L+L+     A P+T  +GP L++  L+L P
Sbjct: 684 EPGISY-KLHLKLVRTGGSAQPETPYSGPGLLIDSLVLLP 722


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,634,244
Number of Sequences: 237096
Number of extensions: 877200
Number of successful extensions: 866
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)