Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H13
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 1.0
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 1.0
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 3.1
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 3.1
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 3.1
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 27 4.1
Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 26 7.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 26 7.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 26 7.2
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 26 7.2
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 208 GVKVPFAGNDKNIVSAIGSLDLTNRQ 285
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 208 GVKVPFAGNDKNIVSAIGSLDLTNRQ 285
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -2
Query: 320 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 147
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 146 ELVNSSGSS 120
E ++S S
Sbjct: 589 ENISSDFES 597
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 104 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 244
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 104 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 244
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 76 RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 177
R L+ +EP+ + +Y+ LLTSS + R +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704
>Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical
protein F57G8.5 protein.
Length = 498
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 4 FQYTNMFGKIVFLLLVALCVGVQSRYLIVSEPVYYIQHYEEPE 132
F ++ + KIV L + +C+G+ R L+V ++ H+ E
Sbjct: 351 FDFSTLSWKIVLLCISVICIGLIVRALLVMLTTHF-SHFNVKE 392
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 342 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 226
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 506 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 544
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 342 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 226
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 1035 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 1073
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 342 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 226
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 716 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 754
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 342 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 226
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 506 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 544
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 342 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 226
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 1035 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 1073
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 342 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 226
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 716 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 754
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,871,450
Number of Sequences: 27780
Number of extensions: 141129
Number of successful extensions: 374
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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