Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H11
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          24   1.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          24   1.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          24   1.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          24   1.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          24   1.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   1.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    24   1.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.8  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.3  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS    R+  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLRSRSRSFQRTS 228


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 103 PEEVYEIIRSELTNFENSGISLLETSHR 186
           P + Y++  + +TNF+NS I  L+   R
Sbjct: 152 PFKEYQMNGNNITNFKNSNIFQLKQHMR 179


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 484 SYVHICANETIHGVEF 531
           +Y+++  N T+H VEF
Sbjct: 360 NYLYLTYNGTVHDVEF 375


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 61   MSKVYNFGAGPAKLPEEVYEI 123
            + +  N G GP K+PE   +I
Sbjct: 1674 LQQAANTGGGPDKIPETAEDI 1694


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 61   MSKVYNFGAGPAKLPEEVYEI 123
            + +  N G GP K+PE   +I
Sbjct: 1670 LQQAANTGGGPDKIPETAEDI 1690


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 26  LNVQL*YINNKTCLKYTISVLDRRNYRKKFMKSS 127
           +N++      KTC KY IS     +  + F ++S
Sbjct: 195 VNIEKSENETKTCKKYAISSNSLGSRSRSFQRTS 228


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 469 LDPNASYVHICANETIHGVEFDFIP 543
           LDP++   +      + G+ +DFIP
Sbjct: 246 LDPSSDSQNEVGFYEVEGIGYDFIP 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,280
Number of Sequences: 438
Number of extensions: 2886
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)