Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H10
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842 331 3e-91
04_04_0299 - 24243364-24244259,24244417-24244428,24245092-242451... 325 2e-89
01_06_0521 + 30001662-30001752,30001883-30001999,30002099-300022... 132 2e-31
03_05_0387 + 23708447-23708470,23708616-23708739,23709081-237092... 97 9e-21
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 36 0.024
05_03_0525 + 15002846-15003048,15004814-15004937,15005458-150054... 32 0.39
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 32 0.39
06_01_0042 + 410061-410544,411401-411837 31 0.67
04_04_1166 - 31427523-31428154,31428888-31429020 30 2.1
08_01_0102 - 735359-735370,735371-735455,735531-735616,735697-73... 29 2.7
03_02_1001 + 13120072-13120332 29 2.7
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 29 3.6
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 29 3.6
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 29 3.6
05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351 29 3.6
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 3.6
01_03_0282 - 14580875-14580891,14582126-14585855 29 3.6
07_03_0708 - 20865786-20867153 29 4.8
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 4.8
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 29 4.8
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967... 29 4.8
06_03_1295 + 29100322-29100391,29100774-29100781,29101571-291016... 28 6.3
03_05_0871 + 28396964-28399843 28 6.3
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 28 6.3
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 28 6.3
11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381... 28 8.3
11_01_0791 + 6627961-6630702 28 8.3
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 28 8.3
08_02_0610 + 19307537-19308011,19308187-19310846 28 8.3
08_02_0075 - 11953723-11956203,11958213-11958512 28 8.3
06_01_0608 - 4399252-4399894,4401640-4402427 28 8.3
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543... 28 8.3
01_01_0416 + 3128433-3128573,3128967-3129455 28 8.3
>02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842
Length = 355
Score = 331 bits (814), Expect = 3e-91
Identities = 149/230 (64%), Positives = 184/230 (80%)
Frame = +1
Query: 4 NAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSG 183
+A +HCPGTQSE+AGKA ACAGCPNQ +CA+ PDP + I R++ VKHKILVLSG
Sbjct: 19 DANEHCPGTQSEEAGKADACAGCPNQQICATAPKG-PDPDLVGIVERMATVKHKILVLSG 77
Query: 184 KGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSGWSPVY 363
KGGVGKST ++ L LA VG+LD DICGPS P++LG+ G+ +H S GWSPVY
Sbjct: 78 KGGVGKSTFSAQLSFALAEMD--CQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVY 135
Query: 364 VTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGTSDEHL 543
V NL +MSIGF+L + DDAVIWRGP+KNG+IKQFL +VDWGE+DYL++D PPGTSDEH+
Sbjct: 136 VESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHI 195
Query: 544 SSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVVENMS 693
S VQYL + G+ GA++VTTPQ+V+L+DVRKEI FC+KV VP+LGVVENMS
Sbjct: 196 SIVQYLQATGIDGAIIVTTPQQVSLIDVRKEINFCKKVGVPILGVVENMS 245
>04_04_0299 -
24243364-24244259,24244417-24244428,24245092-24245193,
24245298-24245340
Length = 350
Score = 325 bits (799), Expect = 2e-89
Identities = 151/235 (64%), Positives = 183/235 (77%), Gaps = 4/235 (1%)
Frame = +1
Query: 1 DNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPA----IEIIKNRLSNVKHKI 168
+NA HCPGTQSE AGKA ACAGCPNQ +CA+ PDP + I R++ VKHKI
Sbjct: 10 ENANDHCPGTQSEAAGKADACAGCPNQQICATAPKG-PDPGAITHLLAIIERMNTVKHKI 68
Query: 169 LVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSG 348
LVLSGKGGVGKST ++ L LA VG+LD DICGPS P++LG+ G+ +H S G
Sbjct: 69 LVLSGKGGVGKSTFSAQLSFALAEMDH--QVGLLDIDICGPSIPKMLGLEGQDIHQSNLG 126
Query: 349 WSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGT 528
WSPVYV NL +MSIGF+L + DDAVIWRGP+KNG+IKQFL +VDWGE+DYL++D PPGT
Sbjct: 127 WSPVYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGT 186
Query: 529 SDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVVENMS 693
SDEH+S VQYL AG+ GA++VTTPQ+V+L+DV+KEI FC+KV VPVLGVVENMS
Sbjct: 187 SDEHISIVQYLQIAGIDGAIIVTTPQQVSLIDVKKEINFCKKVGVPVLGVVENMS 241
>01_06_0521 +
30001662-30001752,30001883-30001999,30002099-30002229,
30002320-30002370,30002639-30002689,30002864-30003007,
30003082-30003224,30003376-30003448,30003540-30003635,
30003737-30003835,30003905-30003958,30004032-30004155,
30004420-30004544,30004720-30004842,30004948-30005028
Length = 500
Score = 132 bits (320), Expect = 2e-31
Identities = 76/172 (44%), Positives = 101/172 (58%)
Frame = +1
Query: 184 KGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSGWSPVY 363
KGGVGKSTV L + LA VGI DAD+ GPS P ++ + + S +
Sbjct: 147 KGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVFGPSLPTMVSPENRLLVMNPESRS-IL 203
Query: 364 VTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGTSDEHL 543
TE L + + F A++ RGP +G+I Q L+ DWGELDYL+ID PPGT D HL
Sbjct: 204 PTEYLGVKMVSFGFAGQGRAIM-RGPMVSGVINQLLTTTDWGELDYLVIDMPPGTGDIHL 262
Query: 544 SSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVVENMSLF 699
+ Q + A LT AV+VTTPQ++A +DV K ++ K+ VP + VVENM F
Sbjct: 263 TLCQVV--APLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCYF 312
>03_05_0387 +
23708447-23708470,23708616-23708739,23709081-23709203,
23710723-23710820,23711778-23711918,23712236-23712361,
23713316-23713486
Length = 268
Score = 97.5 bits (232), Expect = 9e-21
Identities = 56/149 (37%), Positives = 81/149 (54%)
Frame = +1
Query: 145 LSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGE 324
++ V I V SGKGGVGKST + LA + + VG+LDADI GPS P ++ + +
Sbjct: 27 IAGVSDIIAVASGKGGVGKSTTAVNIAVALAKKFQ-LKVGLLDADIYGPSIPTMMNLHAK 85
Query: 325 QVHNSGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYL 504
+ PV + MSIGFL+ D ++WRGP +++ V WG LD L
Sbjct: 86 PEVSEDMRMIPVD-NYGVQCMSIGFLVDK-DAPIVWRGPMVMSALEKITRGVAWGNLDIL 143
Query: 505 LIDTPPGTSDEHLSSVQYLSSAGLTGAVV 591
++D PPGT D LS Q L +G+ +++
Sbjct: 144 VVDMPPGTGDAQLSMSQRLRLSGIYKSIL 172
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 97 GEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAA 240
G+ + PDP + +N L K + + GKGGVGK+T +S+L LA+
Sbjct: 6 GDGAMPDPTV---RNLLEQESLKWVFVGGKGGVGKTTCSSILSILLAS 50
>05_03_0525 + 15002846-15003048,15004814-15004937,15005458-15005481,
15005995-15006779,15006839-15006873,15007108-15007601,
15007951-15008452,15008725-15008867,15009523-15009576,
15010255-15010362,15010529-15010705,15011169-15011186,
15011561-15011938,15012125-15012310,15012356-15013205,
15013362-15013402,15013491-15013868,15014195-15014236,
15014528-15014678,15015621-15015670
Length = 1580
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 523 GTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEK 654
G+SD L QYL +G T A++V + A V+K I+ C++
Sbjct: 1492 GSSDHELDDCQYLIKSGETEALMVMVNDQYANYVVQKVIETCDE 1535
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 136 KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 267
K + NV +++ GKGGVGK STV S++G +A + + + G+
Sbjct: 63 KLKEENVSTLTILVMGKGGVGKSSTVNSIVGERVATVSAFQSEGL 107
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 166 ILVLSGKGGVGKSTVTSLLGHGLA 237
++V SGKGGVGK+T T+ L LA
Sbjct: 39 VVVTSGKGGVGKTTTTANLAASLA 62
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 298 PRVLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGP 441
P+ LGV G V+ GS +PV V E L ++G D A + P
Sbjct: 66 PKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNP 113
>08_01_0102 -
735359-735370,735371-735455,735531-735616,735697-735779,
736790-737048,737132-737300,738554-738698,738782-739004
Length = 353
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 458 IIPFFLGPLHMTASSALPSRNPIDI 384
++P+F PLH TA+++ S +P D+
Sbjct: 30 LLPYFSPPLHATAAASPSSHSPFDV 54
>03_02_1001 + 13120072-13120332
Length = 86
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +3
Query: 309 RCPRGAST*LWLGLVSCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSGL 485
RC R +S GL S CN R +A Q R G Q+ W A +RS L
Sbjct: 8 RCSRTSSARKLNGLFSRRCNSSGEVTSSRGAAAQLAREVR-RGDQQSWCRSAACQRSPL 65
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 IIKNRLSNVKHK-ILVLSGKGGVGKSTVTSLL 222
I++ L +H+ ++V+ G GG+GK+T+ SL+
Sbjct: 85 IMERLLQPTEHREVIVIVGMGGIGKTTLASLV 116
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 52 ASACAGCPNQNLCASGEASRPDPAIE---IIKNRLSNVKH-KILVLSGKGGVGKSTVTSL 219
A+A G P + +G A E I+K + ++L + G G GKST+ S+
Sbjct: 29 AAAAKGAPPGRISHAGGTGGGGGAQEERTILKGITGEARPGEVLAVLGPSGSGKSTLLSI 88
Query: 220 LGHGLAAR 243
LG LA R
Sbjct: 89 LGGRLAGR 96
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 SGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQ-FLSEVDWGELDYLLID 513
S GW + + +S G + IW GP + ++ + E +G+LD LL+
Sbjct: 399 SSMGWLTKFFRGSTHKISEGQYHSKPAEETIWNGPSNSAVVTMVYPLESTFGQLDLLLLA 458
Query: 514 T 516
T
Sbjct: 459 T 459
>05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351
Length = 1007
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 139 NRLSNVKHKILVLSGKGGVGKSTVTSLL 222
N ++V IL + G GGVGK+T+T L+
Sbjct: 188 NNSNHVNLSILPIVGMGGVGKTTLTQLV 215
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -2
Query: 329 TCSPRTPSTRGWLGPHISASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPESTSILCFTF 150
T +P P W P + + PT + RAA+P P+ + P+P P ST + +
Sbjct: 148 TPTPTRPPVPVWAAPLPARTPTPTPSAPPRAAAPSPAGTPS---PSPIPPSSTPVSALSG 204
Query: 149 DKRFFIISIAGSGREASPE 93
R + G G PE
Sbjct: 205 PLRQVDEFLRGLGLRLRPE 223
>01_03_0282 - 14580875-14580891,14582126-14585855
Length = 1248
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 100 EASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 222
E SR +I+++ L N +L + G GG+GK+T L+
Sbjct: 176 ERSRETEKQKIVRSLLENNDIMVLPIVGMGGLGKTTFAKLI 216
>07_03_0708 - 20865786-20867153
Length = 455
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 264 DLGCRYMWSEPAPCTRC-PR 320
D G +W++ APCTRC PR
Sbjct: 109 DTGSNLIWAQCAPCTRCFPR 128
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/83 (22%), Positives = 32/83 (38%)
Frame = -2
Query: 437 PLHMTASSALPSRNPIDISDRFSVTYTGDQPEPELCTCSPRTPSTRGWLGPHISASKIPT 258
P +A PS + + + G Q +P+ +TP +RG +G + +PT
Sbjct: 492 PSQTSADDVKPSESTAAVVKKQWQRNIGFQKQPQSSVTDAKTPESRG-MGKRLWQRNVPT 550
Query: 257 FTYGVRAASPCPSKEVTVLFPTP 189
AS +V+V P
Sbjct: 551 EKQSQSGASVVTPSQVSVASTNP 573
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 142 RLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 246
R+ K + VL G G GKST++SLLG L T
Sbjct: 146 RIKERKESVTVLLCGTSGCGKSTLSSLLGSRLGITT 181
>01_03_0284 -
14595643-14595663,14595978-14596018,14596379-14596732,
14597023-14597494,14597524-14600001
Length = 1121
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 100 EASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 222
E SR +I+K L N +L + G GG+GK+T L+
Sbjct: 176 ERSRAAEKQKIVKALLENDDIMVLPIVGMGGLGKTTFAKLI 216
>06_03_1295 +
29100322-29100391,29100774-29100781,29101571-29101676,
29101994-29102264,29102331-29103188,29103280-29103388
Length = 473
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 468 ELLYHTIFLGTPPYDRVVCTAQQKP 394
E+++ F+G PP+D + A+Q P
Sbjct: 254 EIIHQGYFIGNPPFDVTIALARQHP 278
>03_05_0871 + 28396964-28399843
Length = 959
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 34 SEDAGKASACAGCPNQNLCASGE---ASRPDPAIEIIKNRLSNVKHKILV-LSGKGGVGK 201
S + SA ++ C G+ R + A II L H+ +V + G GGVGK
Sbjct: 139 SSSSSVTSAADSLWRRSSCHLGDDVVVGREEEAGMIIDRLLRCTAHREVVGIVGMGGVGK 198
Query: 202 STVTSLLGHGLAA 240
+T+ SL+ + ++A
Sbjct: 199 TTLASLVYNKVSA 211
>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = -2
Query: 341 PELCTCSPRTPSTRGWLGPHISASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPESTSI 165
P + S P+ + + +S+ +PT +R S P +F PF ST I
Sbjct: 2016 PPVVGVSQSDPNNQNMVPGQVSSPSVPTPVQHLRPTSIMPIPSPLTMFDIAPFQSSTDI 2074
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 653 FSQNCISLRTSSSATSCGVVTTTAPVSPALDRYCTDDK 540
F+++ S RT +A S TA +P R CTDD+
Sbjct: 271 FTESDSSERTHLNANSTSSSDDTATTAPTTPRQCTDDQ 308
>11_04_0340 -
16536571-16536705,16536820-16536951,16537265-16538106,
16538480-16538940,16539032-16540314,16540423-16541627,
16541857-16542157
Length = 1452
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 97 GEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 222
G + D IEI+ N S+ ++L + G GG+GK+T+T +
Sbjct: 224 GRDADRDRIIEILLNEESS-DLRVLPIVGIGGIGKTTLTRFI 264
>11_01_0791 + 6627961-6630702
Length = 913
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 160 HKILVLSGKGGVGKSTV 210
HK++ +SG GG+GK+T+
Sbjct: 192 HKVITVSGMGGLGKTTL 208
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 559 GTAPTTSARLTFLAVYQSVGSPAPPSP 479
G++P + RLT L + +G P PP P
Sbjct: 55 GSSPEPTVRLTLLPMVPGLGLPWPPPP 81
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 484 WGELDYLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQF-CEKVS 660
WG + + I TPP + D ++YL S+ L ++ E ++ + K+I F C +
Sbjct: 43 WGSSNAIAIATPPPSED-----LRYLKSSALDVWLLGYEFPETIIVFMHKQIHFLCSQKK 97
Query: 661 VPVLGVVENMS 693
++G ++ S
Sbjct: 98 ANLIGTLKKAS 108
>08_02_0075 - 11953723-11956203,11958213-11958512
Length = 926
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILV-LSGKGGVGKSTVTSLLGH 228
IE+I + S+ + ++V + G GGVGK+T+ L+ H
Sbjct: 198 IELINSAASSDQELLVVPIVGAGGVGKTTLARLVYH 233
>06_01_0608 - 4399252-4399894,4401640-4402427
Length = 476
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 142 RLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNV 261
R + + ++L+G+ G GK+ + + L A TP+ +V
Sbjct: 61 RQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASV 100
>04_03_0535 - 16850704-16853001,16854055-16854115,16854228-16854323,
16854394-16854521,16855016-16855067,16855182-16855274,
16855473-16855590,16856456-16856609,16857512-16857643,
16859136-16859216,16859353-16859507,16860118-16860343,
16860423-16860507,16860593-16860689,16861785-16861949,
16862046-16862121,16863041-16863103,16863193-16863359,
16863495-16863669,16863743-16863835,16864694-16864810,
16865589-16865778,16866092-16866126
Length = 1618
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 294 ARTTYICIQDPNIYIWSSCSESMSKQGSY 208
AR + CI PN+ W+S +++ G +
Sbjct: 1366 ARAAFSCIMSPNVASWTSLINGLAQNGHW 1394
>01_01_0416 + 3128433-3128573,3128967-3129455
Length = 209
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 221 SKEVTVLFPTPPFPESTSILCFTFDKRFFIISIAGS 114
+ E+T P PP SI CFT D ++AG+
Sbjct: 68 ASEITQRTPLPPETNEVSIECFTGDAATAATTVAGN 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,713,477
Number of Sequences: 37544
Number of extensions: 579265
Number of successful extensions: 2499
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2487
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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