Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H10
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 1e-35
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 8e-30
SB_30493| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_31919| Best HMM Match : ArgK (HMM E-Value=7.6e-15) 32 0.39
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 31 0.91
SB_40275| Best HMM Match : Cadherin (HMM E-Value=0) 31 0.91
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 30 1.6
SB_38113| Best HMM Match : HORMA (HMM E-Value=0) 30 1.6
SB_46958| Best HMM Match : DUF1349 (HMM E-Value=5.2) 30 2.1
SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59) 30 2.1
SB_20640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08) 29 3.7
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 3.7
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 29 4.9
SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_42292| Best HMM Match : EGF (HMM E-Value=3) 29 4.9
SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30) 28 6.4
SB_19312| Best HMM Match : DEP (HMM E-Value=2.5e-09) 28 6.4
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 6.4
SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5) 28 8.5
SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_52023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 135 bits (326), Expect(2) = 1e-35
Identities = 57/93 (61%), Positives = 75/93 (80%)
Frame = +1
Query: 361 YVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGTSDEH 540
YV +NL +MS+GFLL DAVIWRGPKKNG+IKQFL +VDWG+ D+L++DTPPGTSDEH
Sbjct: 270 YVEDNLGVMSVGFLLAKPTDAVIWRGPKKNGLIKQFLRDVDWGDADFLVVDTPPGTSDEH 329
Query: 541 LSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEI 639
LS +QYL+ + GAVVVTTPQ + ++ + ++
Sbjct: 330 LSIIQYLNQTEVDGAVVVTTPQVMMVMGIMMKV 362
Score = 32.7 bits (71), Expect(2) = 1e-35
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 175 LSGKGGVGKSTVTSLLGHGLAA 240
L +GGVGKST T+ L HGLAA
Sbjct: 243 LQTQGGVGKSTFTAHLAHGLAA 264
>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 997
Score = 127 bits (307), Expect = 8e-30
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Frame = +1
Query: 325 QVHNSGSGWSPVYV--TENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELD 498
Q+ + W PVY + L +MSIGFLL S +DAV+WRGPKKN MIKQFLS+V WG++D
Sbjct: 146 QLAGIAARWVPVYTGPDQRLGVMSIGFLLHSKEDAVVWRGPKKNAMIKQFLSDVCWGDID 205
Query: 499 YLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQE 609
YL+IDTPPGTSDEH++ V+ L + GA++VTTPQE
Sbjct: 206 YLIIDTPPGTSDEHITVVENLKTCHPDGAILVTTPQE 242
>SB_30493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = +1
Query: 364 VTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGTSDEHL 543
V + MS+GFL+ ++WRG I++ L +V WG LD LLID PPGT D L
Sbjct: 92 VNFGMPCMSMGFLVDDKAP-IVWRGLMVMSAIEKLLRQVAWGGLDILLIDMPPGTGDTQL 150
Query: 544 SSVQYLSSA 570
S Q + A
Sbjct: 151 SISQLIPVA 159
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 145 LSNVKHKILVLSGKGGVGKST 207
++ VK ILV SGKGGVGKST
Sbjct: 62 IAGVKQVILVASGKGGVGKST 82
>SB_31919| Best HMM Match : ArgK (HMM E-Value=7.6e-15)
Length = 415
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 121 AIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQP 300
A++ I + N K +L ++G GG GKS++ L P +G++ D PS+
Sbjct: 70 ALDTIHKKNKNSKTPVLGITGTGGAGKSSLVDELVRRFLIDFPEKTIGLISVD---PSKR 126
Query: 301 RVLG-VRGEQVHNSGSGWSPVYV 366
+ G + G+++ + VY+
Sbjct: 127 KTGGALLGDRIRMNAINNERVYM 149
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 115 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPS 294
D A+ ++ + KIL LSG +G +T+ ++L TP +G LD CG
Sbjct: 838 DSALSLVTLIQESALLKILNLSGNPSLGNTTLHAIL--NTLMDTPLSQLGTLDLSSCGVR 895
Query: 295 QP 300
P
Sbjct: 896 SP 897
>SB_40275| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1747
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 349 WSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGM---IKQFLSEV 480
W P +T +LS + F+ +AD ++++GP++ G +K F++ V
Sbjct: 1048 WLPKLMTYSLSDLEFEFMTKTADGLLVYQGPEREGANNGLKDFIAVV 1094
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 419 SSALPS-RNPIDISDRFSVTYTGDQPE-PELCTC---SPRTPSTRGWLGPHISASKIPTF 255
++ LPS + P + + QP P+L T S + P+T + ++K PT
Sbjct: 242 TTTLPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTT 301
Query: 254 TYGVRAASPCPSKEVTVLFPT--PPFPESTSIL 162
T A P PS + T + PT P PE T L
Sbjct: 302 TQQTTATLPTPSTKPTTVSPTTRQPPPEPTEPL 334
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 66 WMPESKSMC-LWRSLASRSSYRNNKESLIKCETQNTCTFREGGSGEEYSNFLAWT-WT 233
W E S+ LW + RS+ + + ++ Q C +++GG Y + L WT WT
Sbjct: 416 WKTELLSLADLWEKIV-RSAQSKMRHTFLRSIHQRDCPYKQGG---PYPSLLVWTVWT 469
>SB_38113| Best HMM Match : HORMA (HMM E-Value=0)
Length = 345
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 22 PGTQSEDAGKASACAG---CPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGG 192
P +AGK S C C + N C + A ++ + + N ++L SG+GG
Sbjct: 4 PNNAESEAGKPSQCTSHIICGSHNRCMASRAVHRYRSL-VEPYWIDNNSSRLLYHSGRGG 62
Query: 193 VGKSTVTSLLGHGLAARTPY 252
+ + V +L G R Y
Sbjct: 63 LVQGEVHALKNGGNQVRQRY 82
>SB_46958| Best HMM Match : DUF1349 (HMM E-Value=5.2)
Length = 248
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 66 WMPESKSMC-LWRSLASRSSYRNNKESLIKCETQNTCTFREGGSGEEYSNFLAWT-WT 233
W E S+ LW + RS+ + + ++ Q C +++GG Y + L WT WT
Sbjct: 61 WKTELISLADLWEKIV-RSAQSKMRHTFLRSIHQRDCPYKQGG---PYPSLLVWTVWT 114
>SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59)
Length = 487
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 24 WNTK*GRRQSFRMRWMPESKSMCLWRSLASRSSYRNNKES 143
WN K R+ +W KS+ W S S Y+ N+ +
Sbjct: 435 WNAKKSEREKLANQWNKAKKSLAYWVSKTSFFEYKLNRNA 474
>SB_20640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 275 ASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPESTSILCFTF 150
+ P+ Y V PC S V+ FP + ST+I C T+
Sbjct: 59 SKNFPSEVYTVSTNFPCESYTVSTKFPNKIYKVSTNIPCETY 100
>SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 124 IEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADIC 285
++ + +S+ H ++ V+SG G GKS L H L + + G LD DIC
Sbjct: 84 VKQVLREMSDTSHPQVFVMSGCNGSGKSW----LSHALVRQIMEESEGGLDTDIC 134
>SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08)
Length = 349
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 341 PELCTCSPRTPSTR--GWLGPHISASKIPTFTYGVRAASPCPS 219
P L T PR ++ +GP +SAS IP T +ASP P+
Sbjct: 284 PILATIGPRLSASPIPATIGPPLSASPIPATTAPPLSASPIPA 326
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 145 LSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICG 288
L K + +V+SG+ G GK+ T L+ H L A + ++ I G
Sbjct: 227 LKEKKSQCIVISGESGSGKTESTKLIVHHLTALSRKTQASDVEKTILG 274
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -2
Query: 416 SALPSRNPIDISDRFSVTYTGDQPEPELCTCSPRTPSTRGWLGPHISASKIPTFTYGVRA 237
S L ++P D S T D P+ E SP+ R W I S P + V
Sbjct: 240 SQLSFQDPAPADDTASATE--DVPQEEPTPESPKEEKPRTWAAMVIQPSPTPAGSAPVVK 297
Query: 236 ASPCPSKEVTV--LFPTPP 186
+P P+++ + + TPP
Sbjct: 298 PAPKPAQQTHIGQMVQTPP 316
>SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1429
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 160 HKILVLSGKGGVGKSTVTSLLGHGLAARTP 249
H+++V+SG+ G GK+ T L LA P
Sbjct: 63 HQVIVISGESGAGKTESTKQLVQYLATANP 92
>SB_42292| Best HMM Match : EGF (HMM E-Value=3)
Length = 250
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 632 LRTSSSATSCGVVTTTAPVSPALDRYC 552
++TSS+ATS +V T P SP DR C
Sbjct: 149 VQTSSAATSGQIVCTAKPGSPMGDRGC 175
>SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30)
Length = 351
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 397 FLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGT 528
+++G + D +W ++NG +K+F D + Y + P T
Sbjct: 285 YMIGYSLDGSVWSVYQENGAVKEFPGNTDRSSIVYNRLSPPVAT 328
>SB_19312| Best HMM Match : DEP (HMM E-Value=2.5e-09)
Length = 678
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = -2
Query: 701 IKSDMFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSPALD 561
I DM S + ST F Q R ATSCG V APVSP D
Sbjct: 420 IVHDMISKSTSTDLLMFYQVQSWAR---KATSCGFVLVPAPVSPFPD 463
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 330 YLLPADTEYTGLARTTYICIQDPNIYIWSSCSESMSKQGSYCTLPHS 190
Y A+ E++ TT+IC+ P + W+ S+ G Y +L +S
Sbjct: 75 YWRKANKEHSVHQMTTWICLDAPLHHGWAEMLSSVLDNGGYLSLLNS 121
>SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5)
Length = 424
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 76 NQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGV 195
N++ C+ + + AIEI+KN V+H +++ +G V
Sbjct: 223 NKHTCSIIPCNTTERAIEILKNPTFRVRHGVIINTGVNDV 262
>SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 166 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADI 282
++ GK GK T L LAAR VN+G D ++
Sbjct: 281 VVQFCGKSLTGKPASTKKLSEQLAAREALVNLGFSDPEL 319
>SB_52023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 166 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADI 282
++ GK GK T L LAAR VN+G D ++
Sbjct: 6 VVQFCGKSLTGKPASTKKLSEQLAAREALVNLGFSDPEL 44
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 130 IIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVL 309
I K R S++ V SG+G +T TS + RT + I ADI P++PR L
Sbjct: 324 INKRRSSSMDEVHSVHSGRGTPDSNTSTSTALNTPENRTLIKRMLIKCADIANPARPRYL 383
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,655,023
Number of Sequences: 59808
Number of extensions: 593779
Number of successful extensions: 1899
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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