Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H10
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical pr... 333 6e-92
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.35
U23517-5|AAB93339.2| 425|Caenorhabditis elegans Serpentine rece... 32 0.46
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical ... 31 1.1
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 30 1.4
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 30 1.9
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 2.4
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81540-12|CAB04396.2| 149|Caenorhabditis elegans Hypothetical p... 29 3.2
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 3.2
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 29 3.2
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 29 4.3
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 4.3
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 4.3
AF036688-1|AAB88316.1| 225|Caenorhabditis elegans Hypothetical ... 29 4.3
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical p... 28 5.7
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.5
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.5
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.5
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 28 7.5
DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein. 28 7.5
DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-couple... 28 7.5
AF026211-1|AAB71293.2| 600|Caenorhabditis elegans Sodium:neurot... 28 7.5
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 9.9
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 9.9
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 9.9
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 9.9
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 9.9
U42846-3|AAA83602.1| 190|Caenorhabditis elegans C. elegans PRL-... 27 9.9
U39667-10|AAC69005.1| 119|Caenorhabditis elegans Hypothetical p... 27 9.9
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 27 9.9
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 9.9
AF063401-1|AAC17103.1| 190|Caenorhabditis elegans putative pren... 27 9.9
>Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical
protein F10G8.6 protein.
Length = 313
Score = 333 bits (819), Expect = 6e-92
Identities = 155/236 (65%), Positives = 185/236 (78%), Gaps = 1/236 (0%)
Frame = +1
Query: 1 DNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLS 180
D+A CPGT S AGKAS CAGCPNQ CA+G+ PD + I++R S +KHKIL+LS
Sbjct: 6 DDANAGCPGTGSAGAGKASGCAGCPNQGSCATGQGPPPDADVPKIQDRFSRIKHKILILS 65
Query: 181 GKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSGWSPV 360
GKGGVGKST+TS L LA+ P V ILD DICGPSQPR++GV E+VHNS GW+PV
Sbjct: 66 GKGGVGKSTLTSNLARALAS-DPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPV 124
Query: 361 YVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGTSDEH 540
+ NL+LMSI FLLG +DAVIWRG +KNGMIKQFL +VDWGE+DYLLIDTPPGTSDEH
Sbjct: 125 GIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLIDTPPGTSDEH 184
Query: 541 LSSVQYLSSAG-LTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVVENMSLFIC 705
+S VQ+L AG L GA++V+TPQEV+LLDVRKE+ FC K VP+LGVVENM+ F+C
Sbjct: 185 ISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVENMARFVC 240
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -2
Query: 341 PELCTCSPRTPSTRGWLGPHISASKIPTFTYGVRAASPCPSKE-VTVLFPTPPFPESTS 168
P T +P P+T+ P A PT V +P P VT P PP PE+T+
Sbjct: 184 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTT 242
>U23517-5|AAB93339.2| 425|Caenorhabditis elegans Serpentine
receptor, class o (opsin)protein 1 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -2
Query: 449 FFLGPLHMTASSALPSRNPIDISDRFSVTYTGDQPEPELCTCSPRTPSTRGWLGPHISAS 270
FFL P+ + +S + +D + P+PE+CT +P+ + LG + S
Sbjct: 237 FFLIPVCIASSLYYSIIDHVDSQNASESQLENGIPKPEVCTWAPKNHVGKVGLG-CLLVS 295
Query: 269 KIPTFTYGVRAASPCPS 219
+P F Y + +P S
Sbjct: 296 VVPFFAYSIVCLNPMKS 312
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
protein F44E2.4 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 641 CISLRTSSSATSCGVVTTTAPVSPALDRYCTDDKCSSD 528
C + +TSSS+T CG+VT+ + L+ + CSSD
Sbjct: 170 CDASKTSSSSTLCGLVTSIQTATSCLET-IRPETCSSD 206
>AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical
protein C49G7.11 protein.
Length = 186
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 88 CASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGI 267
CA G PD A++ +KN+ + I+++ G G K ++G L +T + G+
Sbjct: 47 CAKGARIVPDVALKDVKNKTFD----IIIIPGGPGCSKLAECPVIGELL--KTQVKSGGL 100
Query: 268 LDADICGPSQPRVLGVRGEQV 330
+ A GP+ G+ E+V
Sbjct: 101 IGAICAGPTVLLAHGIVAERV 121
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -2
Query: 695 SDMFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSPALDRYCTDDKCSSDV 525
SD+ ST PST T ++S L T T+ V+ T + A + D S+ +
Sbjct: 454 SDLTSTYPSTFTSSWSTESTVLTTQQQDTTTSVILETTEATDAASSSLSPDDVSTQL 510
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 704 QIKSDMFSTTPSTGTDTFSQNCISLRTSSSATSCGV 597
+I + FST P GT T Q +S +SSAT+ +
Sbjct: 600 KIPTSSFSTLPMEGTSTKEQTTLSTEETSSATTATI 635
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSP 570
+TTP+T T T S + T++++T+ TTT +P
Sbjct: 84 TTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATP 121
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVS 573
+T P+T T T +Q ++ TS+S S TTT P +
Sbjct: 275 TTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTT 311
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 556 TAPTTSARLTFLAVYQSVGSPAPPSPLRLRTAL 458
T PT + L YQ+V APP+P L+T L
Sbjct: 372 TQPTVAPTLPPSVTYQNVAPTAPPAPPALQTPL 404
>Z81540-12|CAB04396.2| 149|Caenorhabditis elegans Hypothetical
protein F46B3.15 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +3
Query: 132 NKESLIKCETQNTCTFREGGSG---EEYSNFLAWTWTRCTN-SICKCWDLGCRYMWSEPA 299
N + IKC+ CT + G G + +T C S C D + + P
Sbjct: 54 NSCTTIKCQAGYQCTIKNGKGGCYPVSNKSLDLCVFTTCPKMSSCIVVDGKAKCVPRSP- 112
Query: 300 PCT--RCPRGAST*LWLGLVSCI 362
PCT +CP+G L GL +C+
Sbjct: 113 PCTIKQCPKGQKCGLRNGLSTCV 135
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 556 TAPTTSARLTFLAVYQSVGSPAPPSPLRLRTAL 458
T PT + L YQ+V APP+P L+T L
Sbjct: 372 TQPTVAPTLPPSVTYQNVAPTAPPAPPALQTPL 404
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -2
Query: 689 MFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSPALDRYCTDDKCSSDVPGG 516
M +TTPST T T + + TS+S T+ ++TT P + +D +KC+S+ P G
Sbjct: 314 MQTTTPST-TSTPTTTSTTTTTSASTTT---ISTTKPPTTQIDI----EKCTSNCPVG 363
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTT 585
+TTP+T T T + S TS+S T+ V TTT
Sbjct: 262 TTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTT 294
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -2
Query: 698 KSDMFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPV-SPALDRYCTDDKCSSD 528
+S +TP+TG T S N S TSS S TT+ + D T SSD
Sbjct: 396 ESSTVGSTPTTGLTTLSTNEQSTSTSSGGHSTSTFGTTSETPETSTDFTATSTSSSSD 453
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -2
Query: 311 PSTRGWLGPHISASKIPTFTYGVRAASPCPSKEVTVLFPTPP 186
P+T G G + S PT G+ +S P+ T F PP
Sbjct: 126 PATGGLFGAKSTTSAAPTLGGGLFGSSTAPAAAATTSFGAPP 167
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
C47A10.1 protein.
Length = 1294
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 PAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 222
PA+ I++ +VK + L L G G GKSTV SLL
Sbjct: 1043 PAVPILQGLNVHVKPGQTLALVGPSGCGKSTVISLL 1078
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 PAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 222
PA+ I++ +VK + L L G G GKSTV SLL
Sbjct: 1043 PAVPILQGLNVHVKPGQTLALVGPSGCGKSTVISLL 1078
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 85 LCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVN 258
L + GE R + + ++ K+L+LSG G+GKST+ ++ T VN
Sbjct: 307 LASLGEKERE--VLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVN 362
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -3
Query: 553 APTTSARLTFLA--VYQSVGSPAPPSPLRLRTALSYHFSWDPSI*PRRLHCPAETRSTLA 380
AP + +L L+ V VG PAPPSP+ LR A S S P I P H A +R +
Sbjct: 34 APPPAHQLGCLSGNVRTPVGGPAPPSPV-LRRAPSGPISPSP-ISPVSQHSRASSRHDID 91
Query: 379 IDSPLHIQETS 347
S L I + S
Sbjct: 92 NTSLLSILKLS 102
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 689 MFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTT 585
M TTP+T T + S+ TS++ TS V TTT
Sbjct: 243 MIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTT 277
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 689 MFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTT 585
M TTP+T T + S+ TS++ TS V TTT
Sbjct: 225 MIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTT 259
>AF036688-1|AAB88316.1| 225|Caenorhabditis elegans Hypothetical
protein C24D10.5 protein.
Length = 225
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -1
Query: 231 SMSKQGSYCTLPHSPLPGKYKYFVFHI**AILYYFYSW 118
S S +C+ P+ + +FVF+ A++Y+ + W
Sbjct: 94 SFSGMSYFCSYQRYPISALFSFFVFNATSAMIYFVFVW 131
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical protein
T01H3.2 protein.
Length = 980
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +1
Query: 322 EQVHNSGSGWSPVYVTENLSLMSI---GFLLGSAD-DAVIWRGPKKNGMIKQFLSEVDWG 489
++ H +G+ W+ + +S M + G L A D I N FLS DW
Sbjct: 806 DREHFTGTNWTEILTDSPISSMHLQWEGMKLWCATYDGTILSRSLTNSKSSSFLSSSDWR 865
Query: 490 ELDYLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKE 636
LD +DT T + +V + G + + V + +D + E
Sbjct: 866 HLD---LDTSVITDNISPKAVNDIELTGYSDILYVRIKFILFRIDTKNE 911
>Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical
protein ZK637.5 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 133 IKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLA 237
IKN L K + + GKGGVGK+T + L L+
Sbjct: 9 IKNILEQKTLKWIFVGGKGGVGKTTCSCSLAAQLS 43
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSP 570
+TTP+T T T + + T+ + + VVTT + ++P
Sbjct: 683 TTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITP 720
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSP 570
+TTP+T T T + + T+ + + VVTT + ++P
Sbjct: 739 TTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITP 776
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSP 570
+TTP+T T T + + T+ + + VVTT + ++P
Sbjct: 562 TTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITP 599
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAP 579
STTP+T T TF + T++ ++ TTT+P
Sbjct: 214 STTPTTTTSTFPTSTTEKSTTAQPSTTTKPTTTSP 248
>DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein.
Length = 600
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 354 SCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSG 482
+C+ E+ + R+ A GH + S E++++K VL +G
Sbjct: 158 TCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDTG 200
>DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-coupled
betaine transporterprotein protein.
Length = 600
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 354 SCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSG 482
+C+ E+ + R+ A GH + S E++++K VL +G
Sbjct: 158 TCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDTG 200
>AF026211-1|AAB71293.2| 600|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 3
protein.
Length = 600
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 354 SCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSG 482
+C+ E+ + R+ A GH + S E++++K VL +G
Sbjct: 158 TCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDTG 200
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 677 TPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSPALDRYCT 549
TP+T + N +S T+++ T+ TTT V P CT
Sbjct: 21 TPTTTVPITTTNPVSTTTTTTTTTTEAPTTTTTVVPIPCNICT 63
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1250 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1306
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1307 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1340
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1284 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1341 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1374
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1221 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1277
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1278 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1311
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1355 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1411
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1412 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1445
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 311 PSTRGWLGPHISASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPEST 171
P +G++GP A PTF V P P + T P P P +T
Sbjct: 740 PPPQGYVGPLPPAPPPPTFR--VAPQVPLPVVQTTQTAPKPTLPPTT 784
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1250 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1306
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1307 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1340
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1284 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1341 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1374
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1221 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1277
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1278 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1311
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1355 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1411
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1412 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1445
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical protein
F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 935 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 991
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 992 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1025
>U42846-3|AAA83602.1| 190|Caenorhabditis elegans C. elegans PRL-1
protein protein.
Length = 190
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 472 SEVDWGELDYLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTP 603
SE+ WG++ +L+ D P +S + S ++ L G V V P
Sbjct: 25 SEIAWGKMRFLITDRPNNSSIQ--SYIEELEKHGARAVVRVCEP 66
>U39667-10|AAC69005.1| 119|Caenorhabditis elegans Hypothetical
protein C18A11.1 protein.
Length = 119
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 78 SKSMCLWRSLASRSSYRNNKESLIKCETQNTCTFREGGSGEEYSNFL 218
S +C W + + ++R++ E + TF++G + E NFL
Sbjct: 58 SGDLCAWWACDMKRNFRSHPEEFFNVKIDIGETFKKGFTVHELDNFL 104
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 466 FLSEVDWGELDYLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQF 645
FL +D LD LID PP +E+L + + VV P + LD+ +
Sbjct: 550 FLDHLDEYVLDGALIDPPPPLVNEYLQHLAAEGHFSQFQSAVVRFP--IHTLDLHTVMSI 607
Query: 646 CEKVSV 663
C++ S+
Sbjct: 608 CKQNSI 613
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1284 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 405
+L V S S + + +N+ I F++
Sbjct: 1341 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1374
>AF063401-1|AAC17103.1| 190|Caenorhabditis elegans putative
prenylated protein tyrosinephosphatase protein.
Length = 190
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 472 SEVDWGELDYLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTP 603
SE+ WG++ +L+ D P +S + S ++ L G V V P
Sbjct: 25 SEIAWGKMRFLITDRPNNSSIQ--SYIEELEKHGARAVVRVCEP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,916,111
Number of Sequences: 27780
Number of extensions: 433193
Number of successful extensions: 1833
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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