Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H10
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50960.1 68418.m06320 nucleotide-binding family protein simil... 324 3e-89
At4g19540.1 68417.m02874 expressed protein 147 5e-36
At3g24430.1 68416.m03066 expressed protein contains Pfam profile... 130 9e-31
At5g24020.1 68418.m02822 septum site-determining protein (MIND) ... 36 0.035
At1g12280.1 68414.m01420 disease resistance protein (CC-NBS-LRR ... 34 0.11
At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR ... 32 0.32
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 32 0.32
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 32 0.32
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 32 0.32
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 31 0.56
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 31 0.98
At4g10710.1 68417.m01751 transcriptional regulator-related simil... 31 0.98
At3g54950.1 68416.m06092 patatin-related low similarity to patat... 31 0.98
At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim... 31 0.98
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim... 31 0.98
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 30 1.7
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 30 1.7
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 30 1.7
At5g27710.1 68418.m03324 expressed protein 30 1.7
At3g10350.1 68416.m01241 anion-transporting ATPase family protei... 30 1.7
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 29 4.0
At2g16790.1 68415.m01925 shikimate kinase family protein similar... 29 4.0
At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta... 28 5.2
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 28 5.2
At3g16300.1 68416.m02057 integral membrane family protein contai... 28 5.2
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 28 5.2
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 28 5.2
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 28 5.2
At5g59120.1 68418.m07409 subtilase family protein contains simil... 28 6.9
At5g40470.1 68418.m04908 expressed protein 28 6.9
At4g31530.1 68417.m04477 expressed protein 28 6.9
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 28 6.9
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 28 6.9
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 28 6.9
At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR... 28 6.9
At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu... 28 6.9
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 27 9.2
At3g54540.1 68416.m06035 ABC transporter family protein similar ... 27 9.2
At3g24255.1 68416.m03045 expressed protein 27 9.2
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 27 9.2
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 27 9.2
At2g04040.1 68415.m00385 MATE efflux family protein contains Pfa... 27 9.2
At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similari... 27 9.2
At1g67890.1 68414.m07752 protein kinase family protein contains ... 27 9.2
At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR ... 27 9.2
At1g02020.2 68414.m00122 nitroreductase family protein contains ... 27 9.2
At1g02020.1 68414.m00121 nitroreductase family protein contains ... 27 9.2
>At5g50960.1 68418.m06320 nucleotide-binding family protein similar
to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) [Mus
musculus]; contains Pfam PF00991 : ParA family ATPase
Length = 350
Score = 324 bits (796), Expect = 3e-89
Identities = 145/231 (62%), Positives = 183/231 (79%)
Frame = +1
Query: 1 DNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLS 180
++A +HCPG QSE AGK+ +CAGCPNQ CA+ PDP + I R+S VKHKILVLS
Sbjct: 8 EDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKG-PDPDLVAIAERMSTVKHKILVLS 66
Query: 181 GKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSGWSPV 360
GKGGVGKST ++ L LA VG++D DICGPS P++LG+ G+++H S GWSPV
Sbjct: 67 GKGGVGKSTFSAQLSFALAGMDH--QVGLMDIDICGPSIPKMLGLEGQEIHQSNLGWSPV 124
Query: 361 YVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPPGTSDEH 540
YV +NL +MSIGF+L ++D+AVIWRGP+KNG+IKQFL +V WGE+DYL++D PPGTSDEH
Sbjct: 125 YVEDNLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDYLVVDAPPGTSDEH 184
Query: 541 LSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVVENMS 693
+S VQYL G+ GA++VTTPQEV+L+DVRKE+ FC+KV VPVLGVVENMS
Sbjct: 185 ISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEVSFCKKVGVPVLGVVENMS 235
>At4g19540.1 68417.m02874 expressed protein
Length = 313
Score = 147 bits (357), Expect = 5e-36
Identities = 81/188 (43%), Positives = 111/188 (59%)
Frame = +1
Query: 142 RLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRG 321
RL VK I V SGKGGVGKS+ L LA + + +G+LDAD+ GPS P ++ +
Sbjct: 38 RLHGVKDIIAVASGKGGVGKSSTAVNLAVALANKCE-LKIGLLDADVYGPSVPIMMNINQ 96
Query: 322 EQVHNSGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDY 501
+ N PV + MS+G L+ D ++WRGP + + VDWG+LD
Sbjct: 97 KPQVNQDMKMIPVE-NYGVKCMSMGLLV-EKDAPLVWRGPMVMSALAKMTKGVDWGDLDI 154
Query: 502 LLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVV 681
L++D PPGT D +S Q L L+GAV+V+TPQ+VAL D + I +KV VP+LG+V
Sbjct: 155 LVVDMPPGTGDAQISISQNLK---LSGAVIVSTPQDVALADANRGISMFDKVRVPILGLV 211
Query: 682 ENMSLFIC 705
ENMS F+C
Sbjct: 212 ENMSCFVC 219
>At3g24430.1 68416.m03066 expressed protein contains Pfam profile
PF01883: Domain of unknown function
Length = 532
Score = 130 bits (314), Expect = 9e-31
Identities = 77/185 (41%), Positives = 105/185 (56%)
Frame = +1
Query: 145 LSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGE 324
LS + + I V S KGGVGKSTV L + LA VGI DAD+ GPS P ++
Sbjct: 172 LSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVYGPSLPTMVNPES- 228
Query: 325 QVHNSGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYL 504
++ + TE + + + F A++ RGP +G+I Q L+ +WGELDYL
Sbjct: 229 RILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYL 287
Query: 505 LIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQFCEKVSVPVLGVVE 684
+ID PPGT D L+ Q A LT AV+VTTPQ++A +DV K ++ K+ VP + VVE
Sbjct: 288 VIDMPPGTGDIQLTLCQV---APLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVE 344
Query: 685 NMSLF 699
NM F
Sbjct: 345 NMCHF 349
>At5g24020.1 68418.m02822 septum site-determining protein (MIND)
identical to MinD [Arabidopsis thaliana] GI:6759277;
contains Pfam PF00991 : ParA family ATPase
Length = 326
Score = 35.5 bits (78), Expect = 0.035
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Frame = +1
Query: 166 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGE------Q 327
+++ SGKGGVGK+T T+ +G L AR + +V +DAD+ + +LG+ +
Sbjct: 61 VVITSGKGGVGKTTTTANVGLSL-ARYGF-SVVAIDADLGLRNLDLLLGLENRVNYTCVE 118
Query: 328 VHNSGSGWSPVYVTE-NLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYL 504
V N V + S + + + G K + L G D++
Sbjct: 119 VINGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEWLVDALKTRPEGSPDFI 178
Query: 505 LIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLD 624
+ID P G ++++ + AV+VTTP AL D
Sbjct: 179 IIDCPAGIDAGFITAITPANE-----AVLVTTPDITALRD 213
>At1g12280.1 68414.m01420 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 894
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
+E + RL+ +I+ L G GGVGK+T+ + + + + + V I P R
Sbjct: 164 LERVWTRLTEDGDEIVGLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSPDIHR 223
Query: 304 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLLG 408
+ G G+++ G W V EN + I +LG
Sbjct: 224 IQGDIGKRLDLGGEEWD--NVNENQRALDIYNVLG 256
>At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 888
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 115 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTS 216
DP +E NRL + IL L G GGVGK+T+ S
Sbjct: 159 DPMLESAWNRLMEDEIGILGLHGMGGVGKTTLLS 192
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 124 IEII-KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 267
+EI+ K + +V +++ GKGGVGK STV S++G AA + + + G+
Sbjct: 25 LEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 124 IEII-KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 267
+EI+ K + +V +++ GKGGVGK STV S++G AA + + + G+
Sbjct: 25 LEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 124 IEII-KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 267
+EI+ K + +V +++ GKGGVGK STV S++G AA + + + G+
Sbjct: 25 LEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 166 ILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 267
+LVL GKGGVGK STV SL+G + +P+ G+
Sbjct: 39 VLVL-GKGGVGKSSTVNSLIGEQVVRVSPFQAEGL 72
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 115 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPS 294
D +E L ++++L + G GGVGK+T+ +L+ + + +V I
Sbjct: 161 DTTLEKTWESLRKDENRMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVIWVESSKDAD 220
Query: 295 QPRVLGVRGEQVHNSGSGWS 354
++ GE++H + WS
Sbjct: 221 VGKIQDAIGERLHICDNNWS 240
>At4g10710.1 68417.m01751 transcriptional regulator-related similar
to chromatin-specific transcription elongation factor
FACT 140 kDa subunit (GI:5499741) [Homo sapiens]
Length = 1074
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 484 WGELDYLLIDTPPGTSDEHLSSVQYLSSAGLTGAVVVTTPQEVALLDVRKEIQF-CEKVS 660
WG D L I TPP + D ++YL S+ L ++ + ++ +K+I F C +
Sbjct: 50 WGSADALAIATPPASDD-----LRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNK 104
Query: 661 VPVLGVVE 684
+L VV+
Sbjct: 105 ASLLEVVK 112
>At3g54950.1 68416.m06092 patatin-related low similarity to patatin
[GI:169500][Solanum tuberosum]; contains Patatin domain
PF01734
Length = 488
Score = 30.7 bits (66), Expect = 0.98
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 106 SRPDPAIEIIKNRLSNVKHKILVLS----GKGGVGKSTVTSLLGHGLAARTPYVNVGILD 273
S+P+PA ++ + N + KI +LS G G+ + L H L +++ N I D
Sbjct: 78 SKPEPANSVVAGSIKNQRGKICILSIDGGGMRGILPGKALAYLEHALKSKSGDPNARIAD 137
Query: 274 -ADICGPSQPRVLGVRGEQVHNSGSGWSPVYVTEN 375
D+ S + G+ + S G P++ ++
Sbjct: 138 YFDVAAGS--GIGGIYTAMLFGSRDGNRPIFKADD 170
>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 133 IKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAA 240
++N L K + + GKGGVGK+T +S+L LA+
Sbjct: 10 VQNILDQESLKWVFVGGKGGVGKTTCSSILAICLAS 45
>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 133 IKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAA 240
++N L K + + GKGGVGK+T +S+L LA+
Sbjct: 10 VQNILDQESLKWVFVGGKGGVGKTTCSSILAICLAS 45
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 499 SPAPPSPL-RLRTALSYHFSWDPSI*PRRLHCPAETRSTLAIDSPLHIQETSPSQSYVLA 323
SPA PSP + + +S+ S P+ P H PA T S +P H +PS S A
Sbjct: 203 SPATPSPSPKSPSPVSHSPSHSPAHTPS--HSPAHTPSHSPAHAPSHSPAHAPSHSPAHA 260
Query: 322 PRGHRVH 302
P H
Sbjct: 261 PSHSPAH 267
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 127 EIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGH 228
E++ + + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 127 EIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGH 228
E++ + + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g27710.1 68418.m03324 expressed protein
Length = 380
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 377 RFSVTYTGDQPEPELCTCSPRT 312
+F V + D+P+PE CSPRT
Sbjct: 70 KFLVPFKSDKPKPEFGRCSPRT 91
>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase; contains non-consensus GA
donor splice site at intron 5
Length = 411
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 112 PDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 222
P I +S K K +L GKGGVGK++ + L
Sbjct: 71 PTETISEFDEMVSGTKRKYYMLGGKGGVGKTSCAASL 107
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 174 TFREGGSGEEYSNFLAWTW 230
T REG +G+E++N W+W
Sbjct: 892 TGREGNNGDEHTNLADWSW 910
>At2g16790.1 68415.m01925 shikimate kinase family protein similar to
thermosensitive glucokinase from Escherichia coli
[SP|P39208] [SP|P46859]; contains Pfam profile PF01202:
shikimate kinase
Length = 189
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 148 SNVKHKILVLSGKGGVGKSTVTSLLGHGLA 237
++V K++ + G G GKST+ +LG L+
Sbjct: 5 NDVTGKVIAIMGVSGAGKSTIGKMLGKALS 34
>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 738
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 130 IIKNRLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 246
I+ R+ K + VL G G GKST+++LLG L T
Sbjct: 161 ILSCRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 200
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +1
Query: 166 ILVLSGKGGVGKS-TVTSLLGHGLAA 240
ILVL GK GVGKS T+ S+LG+ +A+
Sbjct: 858 ILVL-GKAGVGKSATINSILGNQIAS 882
>At3g16300.1 68416.m02057 integral membrane family protein contains
TIGRFAM TIGR01569 : plant integral membrane protein
TIGR01569; contains Pfam PF04535 : Domain of unknown
function (DUF588); At2g38480, At1g45222 and others
share this domain structure; distantly related to
GP|14030504 salicylic acid-induced fragment 1 protein
{Gossypium hirsutum}
Length = 212
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 391 STLAIDSPLHIQETSPSQSYVLAPRGHRVHGAGSDHIYLHPRSQHLHMEFVQRVHVQARK 212
ST+A+ + +ETS + Y + H V IYL S + + ++ + +
Sbjct: 59 STVAVTLMVTARETSMTTLYGFEFQLHAVWSLSDSLIYLVVVSSATVLYSLIQLIISGTR 118
Query: 211 LLYSSPLPPSRKVQVFC 161
L+ SP+ P+R FC
Sbjct: 119 LMRKSPVIPTRTQAWFC 135
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 473 LKNC-FIIPFFLGPLHMTASSALPSRNPIDISDRFSVTYTGD 351
LKN I+P T+SS P +P++ S+RF Y+ D
Sbjct: 22 LKNQRLILPLLPSSKPFTSSSVSPPPSPLNASNRFGYPYSAD 63
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 499 SPAPPSPLRLRTALSYHFSWDPSI*PRRLHCPAETRSTLAIDSPLHIQETSPSQSY 332
SP PP PL+ ALS S P PR + + + PLH + +P +
Sbjct: 273 SPPPPPPLKKTAALSSSASKKPPPAPRGSSSGESSNGQVKL-KPLHWDKVNPDSDH 327
>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1273
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 PAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 222
P I+I ++ ++ K + L G+ G GKSTV SLL
Sbjct: 1040 PGIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLL 1075
>At5g59120.1 68418.m07409 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus AA acceptor site at exon 6
Length = 732
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 148 SNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGIL 270
S VK KILV G GG+ V S+ GL RTP +V +
Sbjct: 382 SRVKGKILVCGGPGGL--KIVESVGAVGLIYRTPKPDVAFI 420
>At5g40470.1 68418.m04908 expressed protein
Length = 496
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 382 LMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVD-WGELDYLLIDTPPGTSDEHLSSV-- 552
L+ + + S +I G K+G++ QF+S + L+ L + P +D+HL S+
Sbjct: 267 LLKVSEICESLKSLLIHDGGSKDGLV-QFMSNARCYDTLERLDLRLPMDLTDDHLVSLAA 325
Query: 553 --QYLSSAGLTGAVVVT 597
+ LS+ LT + VT
Sbjct: 326 NFKCLSTLRLTSCIFVT 342
>At4g31530.1 68417.m04477 expressed protein
Length = 324
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 166 ILVLSGKGGVGKSTVTSLLGHGLAAR 243
+LV+ G GGVG+ V SLL + +R
Sbjct: 76 VLVVGGTGGVGQLVVASLLKRNIRSR 101
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 130 IIKNRLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 246
I+ R+ K + VL G G GKST+++LLG L T
Sbjct: 128 ILACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 167
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 130 IIKNRLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 246
I+ R+ K + VL G G GKST+++LLG L T
Sbjct: 147 ILACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 186
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 34 SEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGG 192
S + G A CP+ + +G ASR E + N H +V SG GG
Sbjct: 152 SPNTGVLPAGNICPSGRILKTGMASRTSSRTETLCTGTGNYGHGNVVRSGGGG 204
>At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 897
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 145 LSNVKHKILVLSGKGGVGKSTVTSLLGHG 231
L N KI+ +SG G+GKST+ + L HG
Sbjct: 202 LKNDGVKIVGISGPAGIGKSTIATAL-HG 229
>At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1278
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 106 SRPDPAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 222
+RPD I+I ++ ++ K + L G+ G GKSTV SLL
Sbjct: 1043 ARPD--IQIFRDLCLTIRAGKTVALVGESGSGKSTVISLL 1080
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 124 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 303
+E N + V +L + G GGVGK+T+ S + + + ++ I P+ R
Sbjct: 163 VESTWNSMMEVGVGLLGIYGMGGVGKTTLLSQINNKFRTVSNDFDIAIWVVVSKNPTVKR 222
Query: 304 VLGVRGEQVHNSGSGW 351
+ G+++ GW
Sbjct: 223 IQEDIGKRLDLYNEGW 238
>At3g54540.1 68416.m06035 ABC transporter family protein similar to
ABC50 GI:10863747 from [Rattus norvegicus]
Length = 723
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 127 EIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICG 288
E++KN + H K L G G+GKST+ LL ++V +++ ++ G
Sbjct: 176 ELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVG 230
>At3g24255.1 68416.m03045 expressed protein
Length = 836
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 274 ADICGPSQPRVLGVRGEQVHNSGSGWS 354
+D+C P LG+R + N GS WS
Sbjct: 209 SDVCTPKDEGGLGIRSLKEANKGSFWS 235
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = -2
Query: 365 TYTGDQPEPELCTCSPRTPST-----RGWLGPHISASKIPTFTYGVRAASPCPSKEVTVL 201
T +G P P + T P PS G P S++ P+ YG +P
Sbjct: 59 TASGPPPAPPVGTMRPGQPSPFVSQIPGSRPPPPSSNSFPSPAYGPPGGAPFQR------ 112
Query: 200 FPTPPFP 180
FP+PPFP
Sbjct: 113 FPSPPFP 119
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 163 KILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILD--ADICGPSQPRVLGVRGEQV 330
KI+ LSG GVGK+++ + L + +VG L A+I G Q V + G+ V
Sbjct: 441 KIICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMV 498
>At2g04040.1 68415.m00385 MATE efflux family protein contains Pfam
profile: PF01554 uncharacterized membrane protein family
Length = 476
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Frame = -2
Query: 305 TRGWLGPHISASKIPTFTYGVRAASPCPSK----EVTVL----FPTPPFPESTSILCFTF 150
TRG++ +S F YG+ +A+ + E+ +L P P S +C T
Sbjct: 237 TRGFVSRDFVSSIKQFFQYGIPSAAMICLEWWLFEILILCSGLLPNPKLETSVLSICLTI 296
Query: 149 DKRFFIISIAGSGREASPEAHRF*FGHPAHAEALPASSLCV 27
+ ++IS + ++ ++ G+P A + LC+
Sbjct: 297 ETLHYVISAGVAAAVSTRVSNNLGAGNPQVARVSVLAGLCL 337
>At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similarity
to elicitor inducible beta-1,3-glucanase NtEIG-E76
[Nicotiana tabacum] GI:11071974
Length = 222
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 683 STTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVS 573
+ +PST + + NC++ +SS + G TT P S
Sbjct: 88 AASPSTTPPSTASNCLTGSSSSGTPTTGTPTTGTPTS 124
>At1g67890.1 68414.m07752 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 765
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = -2
Query: 701 IKSDMFSTTPSTGTDTFSQNCISLRTSSSATSCGVVTTTAPVSPALDRYCTD 546
+KS+ ++ + + + +++ ++SSA+SCG +++ +D C D
Sbjct: 428 VKSESLASESNKPANNENMGSVNVNSASSASSCGSTSSSVMNKVDMDSDCLD 479
>At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 906
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 127 EIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGH 228
E++ + + N +++ +SG GG+GK+T+ + H
Sbjct: 172 ELVDHLVENDSVQVVSVSGMGGIGKTTLARQVFH 205
>At1g02020.2 68414.m00122 nitroreductase family protein contains
Pfam PF00881: nitroreductase family protein profile;
contains Prosite PS00343: Gram-positive cocci surface
proteins 'anchoring' hexapeptide
Length = 543
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 451 GMIKQFLSEVDWGELDYLLIDTPPGTSDEHLSSVQYLS 564
G K L E+++ D LL+ P GTS EHL ++ YL+
Sbjct: 300 GKGKAELPEIEFEHPDCLLLVFPNGTSREHL-NLDYLA 336
>At1g02020.1 68414.m00121 nitroreductase family protein contains
Pfam PF00881: nitroreductase family protein profile;
contains Prosite PS00343: Gram-positive cocci surface
proteins 'anchoring' hexapeptide
Length = 642
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 451 GMIKQFLSEVDWGELDYLLIDTPPGTSDEHLSSVQYLS 564
G K L E+++ D LL+ P GTS EHL ++ YL+
Sbjct: 300 GKGKAELPEIEFEHPDCLLLVFPNGTSREHL-NLDYLA 336
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,002,464
Number of Sequences: 28952
Number of extensions: 409692
Number of successful extensions: 1599
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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