Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H07
(562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29; Eu... 355 3e-97
UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 337 1e-91
UniRef50_Q9N0D6 Cluster: Unnamed protein product; n=1; Macaca fa... 304 7e-82
UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2; ... 293 2e-78
UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FE... 252 6e-66
UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2; Crypto... 231 1e-59
UniRef50_A0CN06 Cluster: Chromosome undetermined scaffold_22, wh... 224 1e-57
UniRef50_O77371 Cluster: Cleavage and polyadenylation specificit... 223 2e-57
UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase... 223 2e-57
UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase... 206 4e-52
UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2; ... 195 7e-49
UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific f... 187 1e-46
UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,... 186 3e-46
UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16; T... 170 2e-41
UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificit... 159 5e-38
UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase... 158 7e-38
UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2; ... 157 2e-37
UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2; Ascomycota|... 153 3e-36
UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleava... 152 5e-36
UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole gen... 150 2e-35
UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificit... 148 1e-34
UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein ECU10_... 148 1e-34
UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|R... 145 5e-34
UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metaz... 144 2e-33
UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Meta... 138 1e-31
UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2; Saccharomyc... 137 2e-31
UniRef50_A5BWZ3 Cluster: Putative uncharacterized protein; n=1; ... 135 6e-31
UniRef50_UPI000049831F Cluster: cleavage and polyadenylation spe... 134 1e-30
UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity ... 132 7e-30
UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular or... 127 2e-28
UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1; ... 125 8e-28
UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15; Pezizomyco... 124 1e-27
UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty... 123 2e-27
UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole... 122 8e-27
UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity ... 120 2e-26
UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106, w... 119 4e-26
UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificit... 118 1e-25
UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase... 115 7e-25
UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificit... 115 7e-25
UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6; Me... 106 4e-22
UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6... 100 3e-20
UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lambl... 100 5e-20
UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase... 97 2e-19
UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation s... 92 9e-18
UniRef50_O74740 Cluster: Cleavage factor two Cft2/polyadenylatio... 91 2e-17
UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1; Cal... 89 5e-17
UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus lu... 89 5e-17
UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consis... 89 7e-17
UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16; E... 88 1e-16
UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity fa... 88 2e-16
UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1; ... 86 6e-16
UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella ve... 86 6e-16
UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:... 84 2e-15
UniRef50_Q980D0 Cluster: MRNA 3'-end processing factor, putative... 83 6e-15
UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length enri... 82 8e-15
UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificit... 82 8e-15
UniRef50_A1RXC5 Cluster: Beta-lactamase domain protein; n=1; The... 81 2e-14
UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificit... 80 3e-14
UniRef50_Q8ZTD5 Cluster: MRNA 3'-end processing factor, conjectu... 80 4e-14
UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n... 79 7e-14
UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1; Can... 75 9e-13
UniRef50_Q9YFR8 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 73 3e-12
UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6; Me... 73 6e-12
UniRef50_Q7QRM8 Cluster: GLP_171_24040_22178; n=1; Giardia lambl... 71 2e-11
UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation... 69 7e-11
UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_A3DMW0 Cluster: Beta-lactamase domain protein; n=1; Sta... 68 1e-10
UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificit... 68 2e-10
UniRef50_O29718 Cluster: MRNA 3'-end processing factor, putative... 67 3e-10
UniRef50_Q0W8H2 Cluster: MRNA 3-end processing factor; n=5; Eury... 67 3e-10
UniRef50_O17403 Cluster: Probable cleavage and polyadenylation s... 66 4e-10
UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificit... 66 5e-10
UniRef50_A7D2T2 Cluster: Beta-lactamase domain protein; n=1; Hal... 63 4e-09
UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1; The... 62 7e-09
UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1; Pyr... 62 7e-09
UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor, conjectu... 62 9e-09
UniRef50_UPI00015BB212 Cluster: beta-lactamase domain protein; n... 60 3e-08
UniRef50_Q5QU60 Cluster: Predicted exonuclease of the beta-lacta... 60 3e-08
UniRef50_Q9HS54 Cluster: MRNA 3'-end processing factor homolog; ... 60 3e-08
UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4; Hal... 60 3e-08
UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 60 5e-08
UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon... 59 8e-08
UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation spe... 57 2e-07
UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the beta-lacta... 56 4e-07
UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the beta-lacta... 56 7e-07
UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2; Bac... 55 1e-06
UniRef50_A2BK26 Cluster: Putative exoribonuclease; n=1; Hyperthe... 55 1e-06
UniRef50_Q2Q0D8 Cluster: Putative mRNA processing factor; n=1; u... 54 2e-06
UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14; Proteobacter... 54 3e-06
UniRef50_A1ID10 Cluster: Metallo-beta-lactamase family protein; ... 54 3e-06
UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1; Can... 54 3e-06
UniRef50_Q07ZA5 Cluster: Beta-lactamase domain protein; n=3; Alt... 53 4e-06
UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold ... 53 5e-06
UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;... 53 5e-06
UniRef50_Q896M4 Cluster: Cleavage and polyadenylation specificit... 52 1e-05
UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1; She... 52 1e-05
UniRef50_Q55470 Cluster: Uncharacterized protein sll0514; n=1; S... 52 1e-05
UniRef50_Q8DE34 Cluster: Predicted exonuclease of the beta-lacta... 51 2e-05
UniRef50_A3WMD7 Cluster: Predicted exonuclease of the beta-lacta... 51 2e-05
UniRef50_Q2S180 Cluster: Ysh1p: subunit of polyadenylation facto... 50 3e-05
UniRef50_A6EB60 Cluster: Metallo-beta-lactamase superfamily prot... 50 4e-05
UniRef50_Q6CAZ0 Cluster: Yarrowia lipolytica chromosome C of str... 50 4e-05
UniRef50_Q6BSP2 Cluster: Similar to CA3384|IPF8362 Candida albic... 50 4e-05
UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase... 50 5e-05
UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4; Leg... 49 9e-05
UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1; ... 49 9e-05
UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily prot... 48 1e-04
UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase... 48 1e-04
UniRef50_Q6L0H4 Cluster: MRNA 3'-end processing factor; n=4; The... 48 1e-04
UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1; Rubro... 48 1e-04
UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase... 48 1e-04
UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold ... 48 1e-04
UniRef50_A0Q181 Cluster: Metallo-beta-lactamase family protein, ... 48 1e-04
UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A4XTF4 Cluster: Beta-lactamase domain protein; n=12; Ga... 48 2e-04
UniRef50_A3GHD1 Cluster: Predicted protein; n=3; Saccharomycetal... 48 2e-04
UniRef50_Q8YS71 Cluster: All3220 protein; n=10; Cyanobacteria|Re... 47 3e-04
UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 47 3e-04
UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2; Thermoanaerob... 47 3e-04
UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein; ... 47 3e-04
UniRef50_Q0UZX3 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_A6VTF2 Cluster: RNA-metabolising metallo-beta-lactamase... 46 5e-04
UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the beta-lacta... 46 6e-04
UniRef50_Q5CXL4 Cluster: Inactive CPSFs Cft2p metallobeta-lactam... 46 6e-04
UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1; Sol... 46 8e-04
UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity ... 45 0.001
UniRef50_A3ZTP5 Cluster: Metallo-beta-lactamase family protein; ... 45 0.001
UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: W... 45 0.001
UniRef50_A5DXK9 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q1GQ91 Cluster: Beta-lactamase-like protein; n=43; Bact... 44 0.002
UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily prot... 44 0.002
UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12; Rhizobiales|... 44 0.002
UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1; Opi... 44 0.002
UniRef50_A4J2E1 Cluster: Beta-lactamase domain protein; n=1; Des... 44 0.003
UniRef50_Q74C32 Cluster: Metallo-beta-lactamase family protein; ... 43 0.004
UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein; ... 43 0.004
UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 43 0.004
UniRef50_Q1IJR0 Cluster: Beta-lactamase-like; n=1; Acidobacteria... 43 0.004
UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificit... 43 0.004
UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein; ... 43 0.006
UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q7S0J8 Cluster: Putative uncharacterized protein NCU068... 42 0.007
UniRef50_A7F0N0 Cluster: Putative uncharacterized protein; n=2; ... 42 0.007
UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consis... 42 0.007
UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1; The... 42 0.007
UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=... 42 0.010
UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificit... 41 0.017
UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2; Alp... 41 0.023
UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4; ... 41 0.023
UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Re... 40 0.040
UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6; Proteobacteri... 40 0.040
UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n... 39 0.069
UniRef50_A0LI39 Cluster: Beta-lactamase domain protein; n=1; Syn... 39 0.069
UniRef50_A6R733 Cluster: Putative uncharacterized protein; n=1; ... 38 0.12
UniRef50_Q8ZT63 Cluster: Putative uncharacterized protein PAE341... 38 0.12
UniRef50_Q1NUX3 Cluster: Beta-lactamase-like:RNA-metabolising me... 38 0.16
UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily prot... 38 0.21
UniRef50_A0CJA4 Cluster: Chromosome undetermined scaffold_2, who... 37 0.28
UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein; ... 37 0.37
UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.37
UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase... 36 0.65
UniRef50_A3ZSF3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase... 36 0.85
UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase... 36 0.85
UniRef50_A2R7F5 Cluster: Contig An16c0120, complete genome. prec... 36 0.85
UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4; ... 35 1.5
UniRef50_Q2UQF0 Cluster: MRNA cleavage and polyadenylation facto... 35 1.5
UniRef50_Q5FK37 Cluster: Putative helicase; n=1; Lactobacillus a... 34 2.0
UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein; ... 34 2.0
UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6; De... 34 2.0
UniRef50_A7R3F1 Cluster: Chromosome undetermined scaffold_517, w... 34 2.0
UniRef50_A5BGD5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_Q22R56 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_A1RXU5 Cluster: Beta-lactamase domain protein; n=1; The... 34 2.0
UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1; Novos... 33 3.4
UniRef50_A6EGT4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_A7CVE9 Cluster: Type II site-specific deoxyribonuclease... 33 4.6
UniRef50_A7QLV6 Cluster: Chromosome chr18 scaffold_122, whole ge... 33 4.6
UniRef50_Q6AMI2 Cluster: Related to transposase; n=4; Deltaprote... 32 8.0
UniRef50_Q30ZE5 Cluster: Biopolymer transport protein (ExbB)-lik... 32 8.0
UniRef50_Q0DK86 Cluster: Os05g0182900 protein; n=2; Oryza sativa... 32 8.0
UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q8U376 Cluster: Putative uncharacterized protein PF0596... 32 8.0
>UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29;
Eukaryota|Rep: Integrator complex subunit 11 - Homo
sapiens (Human)
Length = 600
Score = 355 bits (874), Expect = 3e-97
Identities = 160/187 (85%), Positives = 176/187 (94%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I+VGS+SVVYTGDYNMTPDRHLGAAWIDKCRP+LLITESTYATTIRDSKRCRERDFLK
Sbjct: 164 FQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLK 223
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
KVHE VE+GGKVLIPVFALGRAQELCILLET+WERMNLK P+YF+ GLTEKAN+YYK+FI
Sbjct: 224 KVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFI 283
Query: 361 TWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
WTNQKIRKTFVQRNMF+FKHIK FD+++ DNPG MVVFATPGMLHAG SL IF+KWA +
Sbjct: 284 PWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGN 343
Query: 541 EQNMVIM 561
E+NMVIM
Sbjct: 344 EKNMVIM 350
>UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 698
Score = 337 bits (828), Expect = 1e-91
Identities = 150/172 (87%), Positives = 163/172 (94%)
Frame = +1
Query: 40 GDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVL 219
GDYNMTPDRHLGAAWIDKCRPD+LI+ESTYATTIRDSKRCRERDFLKKVHE +E+GGKVL
Sbjct: 245 GDYNMTPDRHLGAAWIDKCRPDILISESTYATTIRDSKRCRERDFLKKVHETIERGGKVL 304
Query: 220 IPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ 399
IPVFALGRAQELCILLET+WERMNLK P+YF+ GLTEKAN+YYK+FITWTNQKIRKTFVQ
Sbjct: 305 IPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQ 364
Query: 400 RNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMV 555
RNMF+FKHIK FD+SY DNPG MVVFATPGMLHAG SL IFKKWA +E+NMV
Sbjct: 365 RNMFEFKHIKAFDRSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMV 416
>UniRef50_Q9N0D6 Cluster: Unnamed protein product; n=1; Macaca
fascicularis|Rep: Unnamed protein product - Macaca
fascicularis (Crab eating macaque) (Cynomolgus monkey)
Length = 328
Score = 304 bits (747), Expect = 7e-82
Identities = 138/167 (82%), Positives = 152/167 (91%)
Frame = +1
Query: 55 TPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFA 234
TP AAWIDKCRP+LLITESTYATTIRDSKRCRERDFLKKVHE VE+GGKVLIPVFA
Sbjct: 118 TPPPCTRAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFA 177
Query: 235 LGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFD 414
LGRAQELCILLET+WERMNLK P+YF+ GLTEKAN+YYK+FI WTNQKIRKTFVQRNMF+
Sbjct: 178 LGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFE 237
Query: 415 FKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMV 555
FKHIK FD+++ DNPG MVVFATPGMLHAG SL IF+KWA +E+NMV
Sbjct: 238 FKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMV 284
>UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 608
Score = 293 bits (718), Expect = 2e-78
Identities = 132/188 (70%), Positives = 155/188 (82%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWI-DKCRPDLLITESTYATTIRDSKRCRERDFL 177
F IR+G SV+YTGDYNMTPDRHLGAA + RP +LI+ESTYATTIRDSKR RERDFL
Sbjct: 168 FEIRLGDHSVLYTGDYNMTPDRHLGAARVLPGVRPTVLISESTYATTIRDSKRARERDFL 227
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMF 357
+KVHECV KGGKV+IPVFALGRAQELCILLE+YWERM L P+YF+ GL E+AN YY++F
Sbjct: 228 RKVHECVMKGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGLAERANQYYRLF 287
Query: 358 ITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAP 537
I+WTN+ I+KTFV+RNMF+FKHIKP +K D PG V+F+TPGMLH G SL +FKKW
Sbjct: 288 ISWTNENIKKTFVERNMFEFKHIKPMEKGCEDQPGPQVLFSTPGMLHGGQSLKVFKKWCS 347
Query: 538 HEQNMVIM 561
NM+IM
Sbjct: 348 DPLNMIIM 355
>UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FEG
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 613
Score = 252 bits (616), Expect = 6e-66
Identities = 115/186 (61%), Positives = 144/186 (77%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK 183
+ ++G ++VYTGDYNMT DRHLGAA ID+ + DLLI+ESTYATTIR SK RER+FL+
Sbjct: 164 YAKMGDAAIVYTGDYNMTTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQA 223
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFIT 363
VH+CV GGK LIP FALGRAQELC+LL+ YWERMN+K P+YF+ GLT +AN YYKM I+
Sbjct: 224 VHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLIS 283
Query: 364 WTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHE 543
WT+Q +++ N FDFK++K FD+S I PG V+FA PGML AGLSL +FK WAP
Sbjct: 284 WTSQNVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFAIPGMLCAGLSLEVFKHWAPSP 343
Query: 544 QNMVIM 561
N+V +
Sbjct: 344 LNLVAL 349
>UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 751
Score = 231 bits (564), Expect = 1e-59
Identities = 105/187 (56%), Positives = 135/187 (72%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F ++V +S+VYTGD+NM DRHLG A I K P LLI+ESTYAT IR S+R ER F +
Sbjct: 185 FHVQVSDESIVYTGDFNMVRDRHLGPALIPKLLPSLLISESTYATYIRPSRRSTERTFCE 244
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
V+ C+++GGKVLIPVFA+GRAQELCILLE YW RM +++P++F +TEKAN+YY++F
Sbjct: 245 MVYSCLKRGGKVLIPVFAIGRAQELCILLEIYWRRMQIRFPIFFGGSMTEKANSYYQLFT 304
Query: 361 TWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
WTN T + N+F F H+ P+DKS + G V+FATPGMLH GLSL FK WAP
Sbjct: 305 NWTN-----TPLADNIFTFPHVLPYDKSILTLSGPAVLFATPGMLHTGLSLQAFKMWAPD 359
Query: 541 EQNMVIM 561
N+ I+
Sbjct: 360 SNNLTII 366
>UniRef50_A0CN06 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 484
Score = 224 bits (548), Expect = 1e-57
Identities = 99/172 (57%), Positives = 135/172 (78%)
Frame = +1
Query: 46 YNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIP 225
YN DRHLG A+ID+ +PDL+I+ESTYAT IRDSKR RER+FL V E +++GGKVLIP
Sbjct: 166 YNSIADRHLGGAYIDQLQPDLVISESTYATIIRDSKRTRERNFLMHVQEVLDRGGKVLIP 225
Query: 226 VFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRN 405
VFALGRAQEL +LLE+YW+R K +Y+A GL EKAN YYK+F W ++KI+++F+ N
Sbjct: 226 VFALGRAQELSVLLESYWQRTKCKAGLYYAAGLIEKANQYYKIFTGWESEKIQQSFLDDN 285
Query: 406 MFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
+F+FK+I+PFD++ I +P +MV+ ATPGMLH GLS+ +FK+W N +++
Sbjct: 286 IFNFKYIQPFDRNLIKSPLSMVLLATPGMLHGGLSMQVFKEWCGCANNSLVI 337
>UniRef50_O77371 Cluster: Cleavage and polyadenylation specificity
factor protein, putative; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor protein, putative
- Plasmodium falciparum (isolate 3D7)
Length = 1017
Score = 223 bits (546), Expect = 2e-57
Identities = 99/185 (53%), Positives = 131/185 (70%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
I V + SV+YTGDYN PD+HLG+A I P++ I+ESTYAT +R +K+ E + V
Sbjct: 302 IEVRNFSVIYTGDYNTIPDKHLGSANIPSLNPEIFISESTYATYVRPTKKASELELCNLV 361
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITW 366
HECV KGGKVLIPVFA+GRAQEL ILL+ YW++M + YP+YF GLTE AN YYK++ +W
Sbjct: 362 HECVHKGGKVLIPVFAIGRAQELSILLDDYWKKMKIHYPIYFGCGLTENANKYYKIYSSW 421
Query: 367 TNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQ 546
N + N+FDF +I PF +Y++ MV+FATPGMLH GLSL FK WA + Q
Sbjct: 422 INSSCMSN-EKENLFDFANISPFLNNYLNEKRPMVLFATPGMLHTGLSLKAFKAWAGNPQ 480
Query: 547 NMVIM 561
N++++
Sbjct: 481 NLIVL 485
>UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase
domain containing protein; n=1; Plasmodium vivax|Rep:
RNA-metabolising metallo-beta-lactamase domain
containing protein - Plasmodium vivax
Length = 911
Score = 223 bits (545), Expect = 2e-57
Identities = 98/187 (52%), Positives = 132/187 (70%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I V + SV+YTGDYN PD+HLG+ I P++ I+ESTYAT +R +++ E D
Sbjct: 240 FKIEVNNFSVIYTGDYNTVPDKHLGSTKIPSLTPEIFISESTYATYVRPTRKASELDLCN 299
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
VHECV KGGKVLIPVFA+GRAQEL ILL++YW++M + YP+YF GLTE AN YY+++
Sbjct: 300 LVHECVHKGGKVLIPVFAIGRAQELSILLDSYWKKMKINYPIYFGCGLTENANKYYRIYS 359
Query: 361 TWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
+W N T ++N+FDF +I PF SY+ MV+FATPGMLH GLSL FK W+
Sbjct: 360 SWVNSSCVST-DKKNLFDFANISPFVNSYLGENRPMVLFATPGMLHTGLSLKAFKAWSGC 418
Query: 541 EQNMVIM 561
+N++++
Sbjct: 419 SKNLIVL 425
>UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase
and metallo-beta-lactamase superfamily domain containing
protein; n=1; Babesia bovis|Rep: RNA-metabolising
metallo-beta-lactamase and metallo-beta-lactamase
superfamily domain containing protein - Babesia bovis
Length = 760
Score = 206 bits (502), Expect = 4e-52
Identities = 89/187 (47%), Positives = 131/187 (70%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + SV+YTGD+NMTPD+HLG A + PD++I ESTYA+ IR ++R E +
Sbjct: 256 FLVECDGISVLYTGDFNMTPDKHLGPARVPSLNPDIMICESTYASIIRQARRSTEMELCT 315
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
VH+C+ GGKVLIPVFA+GRAQEL I+L+TYW ++ L++P+YF GL+E+A +YYK+
Sbjct: 316 VVHDCLLAGGKVLIPVFAVGRAQELAIILDTYWSKLQLRFPIYFGGGLSERATSYYKLHS 375
Query: 361 TWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
WT+ + + N F +H+ PF+ S++ MV+FATPGM+H+GLSL K WAP+
Sbjct: 376 LWTDSR-NIPNMGDNCFSLEHMLPFENSFLTEDRPMVLFATPGMVHSGLSLKACKLWAPN 434
Query: 541 EQNMVIM 561
+N++++
Sbjct: 435 PKNLIVV 441
>UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 678
Score = 195 bits (475), Expect = 7e-49
Identities = 86/178 (48%), Positives = 123/178 (69%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKG 207
V+YTGD+N PD+HLG A + PD+LI ESTYAT +R SKR E + VH+ + G
Sbjct: 266 VLYTGDFNTIPDKHLGPAKVPTLEPDVLICESTYATFVRQSKRATEMELCTTVHDTLING 325
Query: 208 GKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRK 387
GKVLIPVFA+GRAQEL I+L YW +++ +P+YF GL+EKA NYYK+ +WTN
Sbjct: 326 GKVLIPVFAVGRAQELAIILNNYWNNLSISFPIYFGGGLSEKATNYYKLHSSWTNNN-SI 384
Query: 388 TFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
T ++ N F +++ FD+S++++ MV+FATPGM+H GLSL K W+ + N++++
Sbjct: 385 TNLRENPFSLRNLLQFDQSFLNDNRPMVLFATPGMVHTGLSLKACKLWSQNPNNLILI 442
>UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=4; Eutheria|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 401
Score = 187 bits (456), Expect = 1e-46
Identities = 81/102 (79%), Positives = 93/102 (91%)
Frame = +1
Query: 256 CILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPF 435
CILLET+WERMNLK P+YF+ GLTEKAN+YYK+FI WTNQKIRKTFVQRNMF+FKHIK F
Sbjct: 141 CILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAF 200
Query: 436 DKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
D+++ DNPG MVVFATPGMLHAG SL IF+KWA +E+NMVIM
Sbjct: 201 DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 242
>UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 513
Score = 186 bits (453), Expect = 3e-46
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = +1
Query: 13 VGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 192
VGS+SVVYTGDYNMTPDRHLGAAWIDKCRP+LLITESTYATTIRDSKRCRERDFLKKVHE
Sbjct: 188 VGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHE 247
Query: 193 CVEKGGKVLIPVFALGRAQELCILLETYW 279
VE+GGKVLIPVFALGRAQELCILLET+W
Sbjct: 248 TVERGGKVLIPVFALGRAQELCILLETFW 276
>UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16;
Theria|Rep: Uncharacterized protein CPSF3L - Homo
sapiens (Human)
Length = 277
Score = 170 bits (414), Expect = 2e-41
Identities = 78/83 (93%), Positives = 82/83 (98%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
I+VGS+SVVYTGDYNMTPDRHLGAAWIDKCRP+LLITESTYATTIRDSKRCRERDFLKKV
Sbjct: 144 IKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKV 203
Query: 187 HECVEKGGKVLIPVFALGRAQEL 255
HE VE+GGKVLIPVFALGRAQEL
Sbjct: 204 HETVERGGKVLIPVFALGRAQEL 226
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 270 NILGENEPKIPSLLCSWPNRKS*QLLQNVYHMD*SKDKKDFCAKKHV 410
++LG +EP+ LL +R+ LLQ V+ +D +D +DF A++HV
Sbjct: 231 DLLGAHEPEGAHLLLHGADREGQPLLQAVHPLDQPEDPQDFRAEEHV 277
>UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificity
factor subunit 3; n=53; Eumetazoa|Rep: Cleavage and
polyadenylation specificity factor subunit 3 - Homo
sapiens (Human)
Length = 684
Score = 159 bits (385), Expect = 5e-38
Identities = 80/190 (42%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + ++YTGD++ DRHL AA I +PD+LI ESTY T I + + RE F
Sbjct: 165 FMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCN 224
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKY--PVYFALGLTEKANNYYKM 354
VH+ V +GG+ LIPVFALGRAQEL ++L+ YW+ + P+Y+A L +K Y+
Sbjct: 225 TVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQT 284
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
++ N KIRK N F FKHI + D+ G VV A+PGM+ +GLS +F+ W
Sbjct: 285 YVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESW 344
Query: 532 APHEQNMVIM 561
++N VI+
Sbjct: 345 CTDKRNGVII 354
>UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 588
Score = 158 bits (384), Expect = 7e-38
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F+++V S +YTGD++ D HL + + PDLLITESTY +RDS RER F++
Sbjct: 163 FFVQVRGLSFIYTGDFSAIADHHLSGHAVPRLFPDLLITESTYGNQVRDSIAKRERSFVQ 222
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
VH+ V +GGKVLIPVFA+GR QE+C++LE YW RM P+Y+ L E YK +
Sbjct: 223 MVHQVVGEGGKVLIPVFAVGRLQEICLMLEDYWNRMGYTEPIYYTTNLGENCMKVYKQCV 282
Query: 361 TWTNQKIRKTFVQR--NMFDFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGL-SLNIF- 522
W N ++ F F + + F+ KS ID +V+ AT GML+ G + N F
Sbjct: 283 NWMNPTVQTNLFDNGSTAFKFTYSRNFNPKKSKIDESRGLVMLATSGMLNPGTPAFNFFV 342
Query: 523 -KKWAPHEQNMVI 558
+KW +NMVI
Sbjct: 343 NEKWYDDPRNMVI 355
>UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 707
Score = 157 bits (380), Expect = 2e-37
Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + V+YTGD++ DRHL AA I P +LITESTY T + + RE+ F +
Sbjct: 166 FMIEIAGVRVLYTGDFSCLEDRHLCAAEIPPITPQVLITESTYGTQTHEDRAVREKRFTQ 225
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKY--PVYFALGLTEKANNYYKM 354
VH+ V +GG+ LIP FA+G AQEL ++L+ YWE + PVY+A L +K + Y+
Sbjct: 226 MVHDIVTRGGRCLIPAFAIGPAQELMLILDEYWESHQELHDIPVYYASSLAKKCMSVYQT 285
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
F+ N +I+K +N F FKH+ ++ G VV ATPGML +G S +F+ W
Sbjct: 286 FVNGMNSRIQKQIAVKNPFIFKHVSTLRGMDQFEDAGPCVVLATPGMLQSGFSRELFESW 345
Query: 532 APHEQNMVIM 561
P +N I+
Sbjct: 346 CPDTKNGCII 355
>UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2;
Ascomycota|Rep: Endoribonuclease ysh1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 775
Score = 153 bits (371), Expect = 3e-36
Identities = 71/190 (37%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
+++ + ++++TGDY+ DRHL A + RPD+LITESTY T + +E L
Sbjct: 190 YFVEMAGVNILFTGDYSREEDRHLHVAEVPPKRPDVLITESTYGTASHQPRLEKEARLLN 249
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNLK-YPVYFALGLTEKANNYYKM 354
+H + GG+VL+PVFALGRAQEL ++L+ YW ++L+ P+Y+A L K ++
Sbjct: 250 IIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRSVPIYYASSLARKCMAIFQT 309
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
++ N IRK F +RN F F+ +K + D+ G V+ A+PGML G+S + ++W
Sbjct: 310 YVNMMNDNIRKIFAERNPFIFRFVKSLRNLEKFDDIGPSVILASPGMLQNGVSRTLLERW 369
Query: 532 APHEQNMVIM 561
AP +N +++
Sbjct: 370 APDPRNTLLL 379
>UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleavage
and polyadenylation specificity factor, 73 kDa subunit;
n=2; Dictyostelium discoideum|Rep: Similar to Homo
sapiens (Human). Cleavage and polyadenylation
specificity factor, 73 kDa subunit - Dictyostelium
discoideum (Slime mold)
Length = 774
Score = 152 bits (369), Expect = 5e-36
Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + ++YTGD++ DRHL A + D+LI ESTY + + + RE+ F
Sbjct: 192 FMIEIAGVKILYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTS 251
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNLKY-PVYFALGLTEKANNYYKM 354
VH+ VE+ GK LIPVFALGRAQEL ++L+ YW L + P+Y+A L +K Y+
Sbjct: 252 SVHQVVERNGKCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRT 311
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPFDK-SYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
+I N ++R F N F+FKHIK D+ G V A+PGML +GLS +F++W
Sbjct: 312 YINMMNDRVRAQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPGMLQSGLSRQLFERW 371
Query: 532 APHEQNMVIM 561
++N +++
Sbjct: 372 CSDKRNGIVI 381
>UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr12
scaffold_78, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 662
Score = 150 bits (364), Expect = 2e-35
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + V+YTGDY+ DRHL AA I + PD+ I ESTY + + RE+ F
Sbjct: 145 FMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTD 204
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKY--PVYFALGLTEKANNYYKM 354
+H + +GG+VLIP FALGRAQEL ++L+ YW + P+Y+A L ++ Y+
Sbjct: 205 VIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQT 264
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPFDK-SYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
+I N++IR F N FDFKHI P ++ G VV A+P L +GLS +F W
Sbjct: 265 YINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMW 324
Query: 532 APHEQNMVIM 561
++N ++
Sbjct: 325 CSDKKNACVI 334
>UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=7; Trypanosomatidae|Rep: Cleavage
and polyadenylation specificity factor, putative -
Leishmania major
Length = 756
Score = 148 bits (358), Expect = 1e-34
Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 5/192 (2%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + +YTGD++ PDRHL A + PD+LI EST +S+ RE F
Sbjct: 177 FMVDIAGMRALYTGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIRELESREEREHLFTS 236
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWE--RMNLKYPVYFALGLTEKANNYYKM 354
VH+ V +GG+ L+PVFALGRAQEL ++LE +W+ + P+Y+A L ++ Y+
Sbjct: 237 SVHDVVRRGGRCLVPVFALGRAQELLLILEEFWDAHKELQNIPIYYASSLAQRCMKLYQT 296
Query: 355 FITWTNQKIRKTFV-QRNMFDFKHIKPF--DKSYIDNPGAMVVFATPGMLHAGLSLNIFK 525
F++ N ++++ N F FK+I+ KS+ DN G VV A+PGML +G+SL +F+
Sbjct: 297 FVSAMNDRVKQQHANHHNPFVFKYIRSLMDTKSFEDN-GPCVVLASPGMLQSGISLELFE 355
Query: 526 KWAPHEQNMVIM 561
+W +N +IM
Sbjct: 356 RWCGDRRNGIIM 367
>UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein
ECU10_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU10_0900 - Encephalitozoon
cuniculi
Length = 730
Score = 148 bits (358), Expect = 1e-34
Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + ++YTGD++ DRHL AA C+ D LITESTY + RE F
Sbjct: 247 FLVEIEKSKILYTGDFSREEDRHLKAAESPGCKIDALITESTYGVQCHLPRAEREGRFTS 306
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNL-KYPVYFALGLTEKANNYYKM 354
V V++GG+ L+PVFALGRAQEL ++LE +W +L K P+Y+A L ++ Y+
Sbjct: 307 IVQNVVQRGGRCLLPVFALGRAQELLLILEEHWGSNTSLQKIPIYYASALAKRCMGVYQT 366
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPFDK-SYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
+I N++I+K + RN F FK++K D+ G V+ A+PGML +GLS ++F++W
Sbjct: 367 YIGMMNERIQKLSLVRNPFAFKYVKNLKGIDSFDDEGPCVIMASPGMLQSGLSRDLFERW 426
Query: 532 APHEQNMVIM 561
+N VI+
Sbjct: 427 CSDSKNAVII 436
>UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 767
Score = 145 bits (352), Expect = 5e-34
Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 3/190 (1%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + +G V+YTGDY+ DRHL AA + P ++I ESTY + + RE F +
Sbjct: 166 FNVDIGGLRVLYTGDYSRIADRHLPAADVPAIPPHVVIVESTYGVSPHSPREEREIRFTE 225
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNL-KYPVYFALGLTEKANNYYKM 354
KV + +GG+VL+PV ALGRAQEL ++LE +W + +L + P+Y A L KA Y+
Sbjct: 226 KVQTILRRGGRVLLPVVALGRAQELLLILEDFWAQNPDLQRVPIYQASALARKAMTIYQT 285
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPFDK-SYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
+I N ++ F + N F F H+K K S +D+ G VV ATP ML +GLS +F+ W
Sbjct: 286 YINVLNSDMKAAFEEANPFVFNHVKHVSKSSELDDVGPCVVLATPSMLQSGLSRELFESW 345
Query: 532 APHEQNMVIM 561
+N VI+
Sbjct: 346 CEDPKNGVII 355
>UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Ustilago maydis (Smut
fungus)
Length = 880
Score = 144 bits (348), Expect = 2e-33
Identities = 73/191 (38%), Positives = 113/191 (59%), Gaps = 4/191 (2%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + ++YTGD++ DRHL A I +PD+LI ESTY T + + +E F
Sbjct: 181 FLIEIAGLRILYTGDFSREEDRHLVQAEIPPVKPDVLICESTYGTQTHEPRLDKEHRFTS 240
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNL-KYPVYFALGLTEKANNYYKM 354
++H +++GG+VL+PVF LGRAQEL +LL+ YW L P+Y+A L +K + Y+
Sbjct: 241 QIHHIIKRGGRVLLPVFVLGRAQELLLLLDEYWAAHPELHSVPIYYASALAKKCISVYQT 300
Query: 355 FITWTNQKIRKTFVQR-NMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSLNIFKK 528
+I N IR F +R N F FKHI ++ G V+ A+PG + +G+S + ++
Sbjct: 301 YIHTMNDHIRTRFNRRDNPFVFKHISNLRSLEKFEDRGPCVMMASPGFMQSGVSRELLER 360
Query: 529 WAPHEQNMVIM 561
WAP ++N +I+
Sbjct: 361 WAPDKRNGLIV 371
>UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 779
Score = 138 bits (333), Expect = 1e-31
Identities = 70/195 (35%), Positives = 115/195 (58%), Gaps = 8/195 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + V++TGDY+ DRHL +A + ++LI EST+ T + + RER +
Sbjct: 170 FQIEIAGLRVLFTGDYSREVDRHLNSAEVPPLSSNVLIVESTFGTATHEPRLNRERKLTQ 229
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-----ERMNLKYPVYFALGLTEKANNY 345
+H V +GG+VL+PVFALGRAQE+ ++L+ YW E + P+++A L +K +
Sbjct: 230 LIHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELGGGQVPIFYASNLAKKCMSV 289
Query: 346 YKMFITWTNQKIRKTF--VQRNMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSLN 516
++ ++ N IRK F Q N F FK+I + + G V+ A+PGML +GLS +
Sbjct: 290 FQTYVNMMNDDIRKKFRDSQTNPFIFKNISYLRNLEDFQDFGPSVMLASPGMLQSGLSRD 349
Query: 517 IFKKWAPHEQNMVIM 561
+ ++W P ++N+V++
Sbjct: 350 LLERWCPEDKNLVLI 364
>UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2;
Saccharomycetaceae|Rep: Endoribonuclease YSH1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 815
Score = 137 bits (331), Expect = 2e-31
Identities = 74/196 (37%), Positives = 109/196 (55%), Gaps = 9/196 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
++I +G V++TGDY+ DRHL A + +PD+LITEST+ T + + +E
Sbjct: 183 YFIEIGGLKVLFTGDYSSEEDRHLQVAEVPPIKPDILITESTFGTATHEPRLEKETRMTN 242
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYYKM 354
+H + KGG++L+PVFALGRAQEL ++LE YW + +Y+A L K Y+
Sbjct: 243 IIHSTLLKGGRILMPVFALGRAQELLLILEEYWSLNDDLQNINIYYASSLARKCMAVYQT 302
Query: 355 FITWTNQKIRKT------FVQRNMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSL 513
+ N IR T ++N F FK IK + + G VV A+PGML G+S
Sbjct: 303 YTNIMNDSIRLTTSATNSSKKQNPFQFKFIKSIKNLDKFQDFGPCVVVASPGMLQNGVSR 362
Query: 514 NIFKKWAPHEQNMVIM 561
+ ++WAP +N VIM
Sbjct: 363 ELLERWAPDPKNAVIM 378
>UniRef50_A5BWZ3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 344
Score = 135 bits (327), Expect = 6e-31
Identities = 65/99 (65%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F+ +VG ++VYTGDYNMTPDRHLGAA ID+ + DLLITESTYATT+RDSK RER+FLK
Sbjct: 226 FYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYAREREFLK 285
Query: 181 KVHECVEKGGKVLIPVFALGRAQE----LCILLETYWER 285
VH+CV GGKVLIP FALGRAQ L+ W R
Sbjct: 286 AVHKCVADGGKVLIPTFALGRAQNQRYLTAFLISLVWXR 324
>UniRef50_UPI000049831F Cluster: cleavage and polyadenylation
specificity factor 73 kDa subunit, putative; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: cleavage and
polyadenylation specificity factor 73 kDa subunit,
putative - Entamoeba histolytica HM-1:IMSS
Length = 755
Score = 134 bits (325), Expect = 1e-30
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 5/192 (2%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + ++YTGD++ DRHL AA + + D+++ ESTY ++S+ RE F++
Sbjct: 172 FCIEINGVKILYTGDFSGETDRHLQAAEVPPFQIDVMMCESTYGIIEQESRIDRENAFIR 231
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYYKM 354
++ E +++GGK LIPVF+LGRAQE ++LE YW+ ++F + +K Y++
Sbjct: 232 QIIEILKRGGKCLIPVFSLGRAQEFELILEEYWQNHKDLWSVSIFFFSSIAKKCTTYFEK 291
Query: 355 FITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNP---GAMVVFATPGMLHAGLSLNIFK 525
F ++ NQ++RK + FDFK I+ S D VV A+PGML G+S IF+
Sbjct: 292 FTSFMNQELRKK--TKQAFDFKFIREGSSSVDDGAIDYKPCVVMASPGMLQDGISRKIFE 349
Query: 526 KWAPHEQNMVIM 561
+W ++N VI+
Sbjct: 350 RWCTDKKNGVII 361
>UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity
factor protein, CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: Cleavage and polyadenylation
specifity factor protein, CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 780
Score = 132 bits (318), Expect = 7e-30
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 8/195 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + +G ++YTGDY+ DRH+ A I +LI ESTY T I + + RE+ FL
Sbjct: 188 FLVEIGGVRILYTGDYSREDDRHVPRAEIPPIDVHVLICESTYGTRIHEPRIDREKRFLG 247
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYYKM 354
V + + GK L+PVFA+GRAQEL ++LE +W R P+ +A ++ K ++
Sbjct: 248 GVQSIITRKGKCLLPVFAIGRAQELLLILEEHWSRTPSIQNVPIIYASPMSIKCMRVFET 307
Query: 355 FITWTNQKIRK-TFVQRNMFDFKHIKPFD-----KSYIDNPGAMVVFATPGMLHAGLSLN 516
+I +R+ + N F F +IK + K I NPG VV A PGML G S +
Sbjct: 308 YINQCGDSVRRQADLGINPFQFNYIKTVNSLNEIKDIIYNPGPCVVMAAPGMLQNGTSRD 367
Query: 517 IFKKWAPHEQNMVIM 561
IF+ WAP ++N +I+
Sbjct: 368 IFEIWAPDKRNGIIL 382
>UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular
organisms|Rep: Endoribonuclease YSH1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 773
Score = 127 bits (307), Expect = 2e-28
Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 5/192 (2%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F I + ++YTGDY+ DRHL A I +PD++I EST+ ++ +E F
Sbjct: 188 FLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKEKEEQFTT 247
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNLK-YPVYFALGLTEKANNYYKM 354
V V +GG+ L+P+ + G QEL +LL+ YW + L+ PVYFA L ++ YK
Sbjct: 248 LVANIVRRGGRCLMPIPSFGNGQELALLLDEYWNDHPELQNIPVYFASSLFQRGMRVYKT 307
Query: 355 FITWTNQKIRKTFVQR-NMFDFKHIK--PFDKSYIDNPGAMVVFATPGMLHAGLSLNIFK 525
++ N IR F +R N FDF+ +K + +N G V+ ++P + GLS ++ +
Sbjct: 308 YVHTMNANIRSRFARRDNPFDFRFVKWLKDPQKLRENKGPCVIMSSPQFMSFGLSRDLLE 367
Query: 526 KWAPHEQNMVIM 561
+WAP +N VI+
Sbjct: 368 EWAPDSKNGVIV 379
>UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 925
Score = 125 bits (301), Expect = 8e-28
Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 18/205 (8%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDK-CRPDLLITESTYATTIRDSKRCRERDFL 177
F I + ++++TGDY+ DRHL +A K + D+LITEST+ + + RE +
Sbjct: 182 FLISIAGLNILFTGDYSREEDRHLISAEAPKGVKVDVLITESTFGVSSNPPRLEREAALI 241
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYYK 351
K + + +GG+VL+PVFALGRAQEL ++L+ YW R K P+Y+ + + Y+
Sbjct: 242 KSITSILNRGGRVLMPVFALGRAQELLLILDEYWSRHPELQKIPIYYIGNIARRCMVVYQ 301
Query: 352 MFITWTNQKIRKTFVQR--------------NMFDFKHIKPFDK-SYIDNPGAMVVFATP 486
+I N+ I++ F QR +DF+ ++ D+ G V+ A+P
Sbjct: 302 TYIGAMNENIKRLFRQRMAEAEASGDKSISAGPWDFRFVRSVRSIERFDDVGGCVMLASP 361
Query: 487 GMLHAGLSLNIFKKWAPHEQNMVIM 561
GML G S + ++WAP+E+N VIM
Sbjct: 362 GMLQTGTSRELLERWAPNERNGVIM 386
>UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15;
Pezizomycotina|Rep: Endoribonuclease ysh1 - Emericella
nidulans (Aspergillus nidulans)
Length = 884
Score = 124 bits (300), Expect = 1e-27
Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDK-CRPDLLITESTYATTIRDSKRCRERDFL 177
F I + ++++TGDY+ DRHL A + + + D+LITEST+ + + RE +
Sbjct: 181 FLISIAGLNILFTGDYSREEDRHLIPATVPRGVKIDVLITESTFGISSNPPRLEREAALM 240
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYYK 351
K + + +GG+VL+PVFALGRAQEL ++LE YWE K P+Y+ + Y+
Sbjct: 241 KSITGVLNRGGRVLMPVFALGRAQELLLILEEYWETHPELQKIPIYYIGNTARRCMVVYQ 300
Query: 352 MFITWTNQKIRKTFVQR--------------NMFDFKHIKPF-DKSYIDNPGAMVVFATP 486
+I N I++ F QR +DFK+++ D+ G V+ A+P
Sbjct: 301 TYIGAMNDNIKRLFRQRMAEAEASGDKSVSAGPWDFKYVRSLRSLERFDDVGGCVMLASP 360
Query: 487 GMLHAGLSLNIFKKWAPHEQNMVIM 561
GML G S + ++WAP+E+N V+M
Sbjct: 361 GMLQTGTSRELLERWAPNERNGVVM 385
>UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty
factor, subunit, putative; n=4; Piroplasmida|Rep:
Cleavage and polyadenylation specificty factor, subunit,
putative - Theileria annulata
Length = 1282
Score = 123 bits (297), Expect = 2e-27
Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 8/195 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + ++YTGDY++ D+HL +A I LLI+ESTY + + + RE FL
Sbjct: 174 FLVEIDGVRILYTGDYSVEKDKHLPSAEIPSTNVHLLISESTYGIRVHEERSQREMRFLH 233
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWE--RMNLKYPVYFALGLTEKANNYYKM 354
V + + + GK L+PVFALGR+QE+ ++L+ YWE R P+++ L K+ Y+
Sbjct: 234 VVMDIIMREGKCLLPVFALGRSQEILLILDNYWENNRQLHNVPIFYISPLASKSLRVYET 293
Query: 355 FITWTNQKIRKTFVQR-NMFDFKHIK-----PFDKSYIDNPGAMVVFATPGMLHAGLSLN 516
F+ I+++ N FDFK +K ++Y+ G ++ +PGML G SL
Sbjct: 294 FVGQCGDYIKQSVYNGFNPFDFKFVKYARSIKQIRNYLLRDGPCIIMTSPGMLQGGPSLE 353
Query: 517 IFKKWAPHEQNMVIM 561
+F+ P +N V++
Sbjct: 354 VFELICPDNRNGVVL 368
>UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7053, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 810
Score = 122 bits (293), Expect = 8e-27
Identities = 64/154 (41%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Frame = +1
Query: 109 LITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERM 288
L ESTY T I + + RE F VH+ V + G+ LIPVFALGRAQEL ++L+ YW+
Sbjct: 257 LSQESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRAQELLLILDEYWQNH 316
Query: 289 NLKY--PVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPF-DKSYIDNP 459
+ P+Y+A L K Y+ +I N KIRK N F FKHI + D+
Sbjct: 317 PELHDIPIYYASSLARKCMAVYQTYINAMNDKIRKAININNPFVFKHISNLKSMDHFDDI 376
Query: 460 GAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
G VV A+PGM+ +GLS +F+ W ++N VI+
Sbjct: 377 GPSVVMASPGMMQSGLSRELFESWCTDKRNGVII 410
>UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity
factor protein, putative; n=2; Plasmodium vivax|Rep:
Cleavage and polyadenylation specifity factor protein,
putative - Plasmodium vivax
Length = 858
Score = 120 bits (289), Expect = 2e-26
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + + +YTGDY+ DRH+ A I +LI E TY + D ++ RE FL
Sbjct: 218 FLVEINNIRFLYTGDYSREVDRHIPIAEIPAIDVHVLICEGTYGIKVHDDRKKREVRFLN 277
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWER--MNLKYPVYFALGLTEKANNYYKM 354
+ + GKVL+PVFALGRAQEL +++E +WER K P+++ + K+ Y+
Sbjct: 278 MITSILNNKGKVLLPVFALGRAQELLLIMEEHWERNPQLQKIPIFYISSMATKSLCIYET 337
Query: 355 FITWTNQKIRKTFVQ-RNMFDFKHIKPFDKS--------YIDNPGAMVVFATPGMLHAGL 507
FI +R + +N F+FK +K + KS Y DN VV A+PGML G+
Sbjct: 338 FINLCGDFVRHVLNEGKNPFNFKFVK-YAKSLDSILNYLYQDN-NPCVVMASPGMLQNGI 395
Query: 508 SLNIFKKWAPHEQNMVIM 561
S NIF AP +++ VI+
Sbjct: 396 SKNIFNIIAPDKKSGVIL 413
>UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 690
Score = 119 bits (287), Expect = 4e-26
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + V+YTGDY+ +RHL A + + +LI E+TY T +++ RE +FLK
Sbjct: 164 FMVEIDGVRVLYTGDYSTEKERHLRPAQLPLEKIHVLIVEATYGDTQHETRTKREENFLK 223
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWER--MNLKYPVYFALGLTEKANNYYKM 354
++ + GG VL+PVFA GR EL I+L+ YW + ++P+Y L K + ++
Sbjct: 224 EIVSTLNGGGNVLLPVFATGRCHELLIILDEYWSKNPQVQQFPIYSTCTLAIKCTHIFQK 283
Query: 355 FITWTNQKIRKTFVQRNMFDFKHI--KPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKK 528
K K N+F F HI K + ++N VV A+PG+L +G S I++
Sbjct: 284 HFNKLGNKYHK---GENLFKFNHINTKKHLQDILNNQKPKVVMASPGLLQSGHSKQIYEY 340
Query: 529 WAPHEQNMVIM 561
W E+N VI+
Sbjct: 341 WCKDEKNQVII 351
>UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificity
factor, 73 kDa subunit; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor, 73 kDa subunit -
Plasmodium yoelii yoelii
Length = 942
Score = 118 bits (283), Expect = 1e-25
Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 11/198 (5%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + + ++YTGDY+ DRH+ A I +LI E TY + D++R RE FL
Sbjct: 211 FLVEINNIRLLYTGDYSREIDRHIPIAEIPNIDVHVLICEGTYGIKVHDNRRKREAIFLN 270
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWER-MNL-KYPVYFALGLTEKANNYYKM 354
+ + GKVL+PVFALGRAQE+ ++LE +W+R NL K P+++ + K+ Y+
Sbjct: 271 MLTNILNSKGKVLLPVFALGRAQEILLILEEHWDRNPNLQKIPIFYISSMATKSLCIYET 330
Query: 355 FITWTNQKIRKTFVQ-RNMFDFKHIKPFDKS--------YIDNPGAMVVFATPGMLHAGL 507
+I + I+K + +N F+FK++K + KS Y DN V+ A+PGML +G+
Sbjct: 331 YINLCSDFIKKIVNEGKNPFNFKYVK-YAKSLDSILNYLYQDN-YPCVIMASPGMLQSGI 388
Query: 508 SLNIFKKWAPHEQNMVIM 561
S +IF A +++ VI+
Sbjct: 389 SKSIFNIIASDKKSGVII 406
>UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 679
Score = 115 bits (277), Expect = 7e-25
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC------RPDLLITESTYATTIRDSKRCRER 168
+ + V+YTGD+++ +RHL A I K RPD+LI EST+ +S+ RE
Sbjct: 167 VEIDGVKVLYTGDFSLENERHLQGAEIPKSLSGEIIRPDVLIMESTHGLARIESRVDREY 226
Query: 169 DFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKY---PVYFALGLTEKAN 339
F+ V + +++GG+ LIP+FALGRAQEL I+L+ YWE + +Y P+Y+ L ++A
Sbjct: 227 RFIDNVTKIIKRGGRCLIPIFALGRAQELLIILDEYWE-SHPEYNGVPIYYGSNLAKQAI 285
Query: 340 NYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNI 519
Y F N ++ + F+F ++K D+ VV +P ML G+S I
Sbjct: 286 AAYNAFYQDHNSRV---VTAKGKFEFSYVKYIRDYDFDDSLPCVVLCSPAMLQNGMSRKI 342
Query: 520 FKKWAPHEQNMVIM 561
F+ W + N +I+
Sbjct: 343 FEAWCSNSVNGLII 356
>UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=8; Magnoliophyta|Rep: Cleavage and
polyadenylation specificity factor subunit 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 739
Score = 115 bits (277), Expect = 7e-25
Identities = 62/186 (33%), Positives = 105/186 (56%), Gaps = 7/186 (3%)
Frame = +1
Query: 22 QSVVYTGDYNMTPDRHLGAAWIDK-CRPDLLITESTYAT-TIRDSKRCRERDFLKKVHEC 195
+ V+Y DYN +RHL + RP +LIT++ +A T + +++ R+++FL + +
Sbjct: 167 EDVIYAVDYNHRKERHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKH 226
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQ 375
+E GG VL+PV GR EL ++LE +W + +P+YF ++ +Y K F+ W +
Sbjct: 227 LEVGGNVLLPVDTAGRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSD 286
Query: 376 KIRKTF--VQRNMFDFKHIK-PFDKSYIDN--PGAMVVFATPGMLHAGLSLNIFKKWAPH 540
I K+F + N F +H+ +K+ +DN PG VV A+ L AG + IF +WA
Sbjct: 287 SISKSFETSRDNAFLLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWAND 346
Query: 541 EQNMVI 558
+N+V+
Sbjct: 347 PRNLVL 352
>UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0162 -
Methanococcus jannaschii
Length = 421
Score = 106 bits (254), Expect = 4e-22
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT--IRDSKRCRERDFL 177
++ V + ++YTGD N R L A D D+LI ESTY + I+ +++ ER +
Sbjct: 140 YLEVDGKKILYTGDINEGVSRTLLPADTDIDEIDVLIIESTYGSPLDIKPARKTLERQLI 199
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMF 357
+++ E +E GGKV+IPVFA+GRAQE+ +++ Y L+ + G A Y +
Sbjct: 200 EEISETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLRDVPIYTDGSLIHATAVYMSY 259
Query: 358 ITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFK 525
I W N KI K V+ + F IK D+S + N ++ +T GM+ G L K
Sbjct: 260 INWLNPKI-KNMVENRINPFGEIKKADESLVFNKEPCIIVSTSGMVQGGPVLKYLK 314
>UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6;
Thermoprotei|Rep: MRNA 3'-end polyadenylation factor -
Sulfolobus solfataricus
Length = 639
Score = 100 bits (239), Expect = 3e-20
Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G ++VYTGD+ + L A + R D LI E+TY + ++ E + L+ +++
Sbjct: 347 GKHNIVYTGDFKYAKTKLLDKANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINKT 406
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVYFALGLTEKANNYYKMFITWTN 372
+ KGGKVLIPV A+GR QE+ +++ + ++ + + PVY GL ++ + + W
Sbjct: 407 LNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWLG 465
Query: 373 QKIRKTFVQR--NMFDFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
+++R+ + + N F +H K + K I ++ AT GML+ G ++ FK AP
Sbjct: 466 REVREEILYKDENPFTSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAVEFFKTMAPD 525
Query: 541 EQNMVI 558
+N +I
Sbjct: 526 PKNAII 531
>UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_393_23867_26140 - Giardia lamblia
ATCC 50803
Length = 757
Score = 99.5 bits (237), Expect = 5e-20
Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTP-DRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFL 177
F I + + +YTGD++ P DRHL A + + DLLI ESTY T + + RERDF+
Sbjct: 200 FHISIDNFHALYTGDFSCEPEDRHLQPATFPQVKLDLLIIESTYGTIRQKERMTRERDFI 259
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYW---ERMNLKYPVYFALGLTEKANNYY 348
+ V+K G VL+PVF++GR QEL +L+ YW E+ + +Y+ + + A Y
Sbjct: 260 DLIVSTVKKDGCVLLPVFSIGRVQELLCILQEYWREHEQEMARVTIYYVSAIADNARQLY 319
Query: 349 ---KMFITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNP-GAMVVFATPGMLHAGLSLN 516
K F+ + + + +Q + I + K+ NP V+F TPGML +G+S
Sbjct: 320 SKDKGFLRHGDTGL--SDIQTGKRKDRII--YTKTRPKNPKKPYVMFCTPGMLQSGVSKE 375
Query: 517 IFKKWAPHEQNMVIM 561
++ + N++++
Sbjct: 376 MYNELCGSPDNLLLV 390
>UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Tetrahymena thermophila SB210
Length = 750
Score = 97.5 bits (232), Expect = 2e-19
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 6/193 (3%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLK 180
F + + V+YTGDY+ D + A I + D+LI E TY +S+ RE+ +
Sbjct: 155 FLVEIDGVRVLYTGDYSTEKDILIPPAQIPNEKVDVLIVEGTYGKCNHESRSEREQQLTQ 214
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLK---YPVYFALGLTEKANNYYK 351
+V V+ G+ L+PVFALGRAQE+ ++LE +W++ + + ++F L++KAN ++
Sbjct: 215 EVMRIVKNKGQCLLPVFALGRAQEIVLILEEFWKQNSSELADIKIHFTQNLSKKANQIFQ 274
Query: 352 MFITWTNQKIRKTFVQRNMFDFKHIKPFD---KSYIDNPGAMVVFATPGMLHAGLSLNIF 522
+ + IRK Q N F+ H P + ID V+ ++P L +G+S I
Sbjct: 275 YYKSMMADPIRKN--QLNPFNL-HYAPNNITKHDEIDENKPCVILSSPFNLQSGISRTII 331
Query: 523 KKWAPHEQNMVIM 561
++ QN VI+
Sbjct: 332 ERICSKPQNGVIL 344
>UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=7; Coelomata|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Drosophila melanogaster (Fruit fly)
Length = 756
Score = 91.9 bits (218), Expect = 9e-18
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKK 183
++VG + +VY D+N +RHL +D+ RP LLIT++ A + +R R+ +
Sbjct: 163 VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTN 222
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMN---LKYPVYFALGLTEKANNYYKM 354
+ + V G VLI V GR EL +L+ W+ + Y + ++ + K
Sbjct: 223 ILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKS 282
Query: 355 FITWTNQKIRKTF--VQRNMFDFKHIK---PFDKSYIDNPGAMVVFATPGMLHAGLSLNI 519
I W + K+ K F + N F FKHI+ Y G VV A+ L +G + ++
Sbjct: 283 QIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDL 342
Query: 520 FKKWAPHEQNMVIM 561
F +WA + N +I+
Sbjct: 343 FVQWASNANNSIIL 356
>UniRef50_O74740 Cluster: Cleavage factor two Cft2/polyadenylation
factor CPSF-73; n=1; Schizosaccharomyces pombe|Rep:
Cleavage factor two Cft2/polyadenylation factor CPSF-73
- Schizosaccharomyces pombe (Fission yeast)
Length = 797
Score = 90.6 bits (215), Expect = 2e-17
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHL-GAAWIDKC-------RPDLLITESTYATTIRDSKRCRERDF 174
S+SV+Y D+N + D+HL GAA RP+ LIT++ + S++ R+ F
Sbjct: 152 SESVLYAVDWNHSKDKHLNGAALYSNGHILEALNRPNTLITDANNSLVSIPSRKKRDEAF 211
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYY 348
++ V + KGG VL+PV A R ELC +L+ +W L +P+ F + K +Y
Sbjct: 212 IESVMSSLLKGGTVLLPVDAASRVLELCCILDNHWSASQPPLPFPILFLSPTSTKTIDYA 271
Query: 349 KMFITWTNQKIRKTF-VQRNMFDFKHIKPF-DKSYIDN--PGAMVVFATPGMLHAGLSLN 516
K I W I + F + N+ +F++I D S I + PG V+ AT L G S
Sbjct: 272 KSMIEWMGDNIVRDFGINENLLEFRNINTITDFSQISHIGPGPKVILATALTLECGFSQR 331
Query: 517 IFKKWAPHEQNMVIM 561
I N +I+
Sbjct: 332 ILLDLMSENSNDLIL 346
>UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Beta-lactamase domain protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 821
Score = 89.4 bits (212), Expect = 5e-17
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK 183
+I+ SV+YTGD++ + A I K RPD++I ESTY + ++ E
Sbjct: 154 FIQTQEGSVLYTGDFSTDKQLTVDKASIPKIRPDVVICESTYGDRLHTNRNYEEERLFNS 213
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFIT 363
++E + KGGKVLIP FA+GRAQE+ ++L Y ++ +++ V F G+ + YK T
Sbjct: 214 IYEFISKGGKVLIPAFAIGRAQEIILILRNYMKKKKVEFNV-FIDGMVREVIRVYKNNPT 272
Query: 364 WTNQKIRKTFVQ------RNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFK 525
+ + + K ++ + D K + + + V+ ++ GML G S+ +
Sbjct: 273 FLSSRYYKKVLKGEEIFLSDNIDIITDKKQREEIMSSSDPCVIISSSGMLTGGPSVFYAE 332
Query: 526 KWAPHEQNMV 555
K ++ ++
Sbjct: 333 KLVENQNALI 342
>UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 715
Score = 89.4 bits (212), Expect = 5e-17
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
++ VVY DYN+ +RHL D RP LLIT+++ +K R+ + +
Sbjct: 149 AEDVVYAVDYNVRKERHLNGTSFDAIHRPALLITDASSVDREVPNKTTRDAKLIDSILSS 208
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVYFALGLTEKANNYYKMFITWTN 372
+ G VLIP+ GR EL +LLE W + L Y + + ++ K + W
Sbjct: 209 LRMNGNVLIPIDPAGRVLELILLLEEKWAQRQLGSYQIVLLTNVAYNTLDFAKSHLEWMG 268
Query: 373 QKIRKTFVQR--NMFDFKHI---KPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAP 537
+ F +R N F+ K + ++ PG VV A+ G L AG S ++F +WA
Sbjct: 269 DHVTNAFERRRENPFNTKFLTLCHSMEELQALPPGPKVVLASFGSLEAGPSRHLFAEWAE 328
Query: 538 HEQNMVIM 561
+ N+VI+
Sbjct: 329 DKSNLVIL 336
>UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Methanopyrus kandleri|Rep: Predicted
metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Methanopyrus kandleri
Length = 652
Score = 89.0 bits (211), Expect = 7e-17
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Frame = +1
Query: 31 VYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGG 210
VYTGD N TP R L A R D ++ E+TY + S+R E F K V + ++KGG
Sbjct: 364 VYTGDINPTPSRLLEGADNRFKRVDSMVVEATYGDSRHGSRRKEENRFRKIVRDTLKKGG 423
Query: 211 KVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKT 390
KVLIP FA+GRAQE+ ++LE + L+ PVY G+ +A + + + N++++
Sbjct: 424 KVLIPSFAVGRAQEVMLVLEDMHRKDELEGPVYLD-GMIYEATAIHTAYPEYLNRRLQHR 482
Query: 391 FVQR--NMFDFKHIKPFD-----KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQN 549
+ + F + +P + ++ +++ V+ +T GML G L ++ + +N
Sbjct: 483 ILHEDDDPFTSEVFEPVEGSDHRQAIMEDDEPAVILSTSGMLEGGPILEYLRELSDDPKN 542
Query: 550 MVI 558
+I
Sbjct: 543 TLI 545
>UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16;
Euryarchaeota|Rep: Uncharacterized protein MJ1236 -
Methanococcus jannaschii
Length = 634
Score = 88.2 bits (209), Expect = 1e-16
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYAT--TIRDSKRCRERDFLKKVH 189
G ++ YTGD R L A R + LI ESTY + + ER+ L+ V
Sbjct: 341 GLYNLAYTGDIKFETSRLLEPAVCQFPRLETLIIESTYGAYDDVLPEREEAERELLRVVS 400
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWT 369
E ++GGKVLIPVF +GRAQEL ++LE + + PVY G+ +A + + +
Sbjct: 401 ETTDRGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLD-GMIWEATAIHTAYPEYL 459
Query: 370 NQKIRKTFVQR--NMF---DFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIFKK 528
++++R+ N F FK + + + ID+ V+ AT GML G S+ K
Sbjct: 460 SKEMRQKIFHEGDNPFLSEVFKRVGSTNERRKVIDSDEPCVILATSGMLTGGPSVEYLKH 519
Query: 529 WAPHEQNMVI 558
AP E+N +I
Sbjct: 520 LAPDEKNAII 529
>UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity
factor 100 kDa subunit; n=1; Ostreococcus tauri|Rep:
Polyadenylation cleavage/specificity factor 100 kDa
subunit - Ostreococcus tauri
Length = 807
Score = 87.8 bits (208), Expect = 2e-16
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITE-STYATTIRDSKRCRERDFLKKVHE 192
++ ++Y DYN+ +RHL A D RP LLIT+ S+ + S R+ + +
Sbjct: 194 AEDIIYAVDYNVRKERHLNGATFDSIHRPALLITDASSVEREVPKSTVPRDTKLVDTILS 253
Query: 193 CVEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVYFALGLTEKANNYYKMFITWT 369
+ G VLIP+ GR EL +LLE W++ L Y + + ++ K + W
Sbjct: 254 SLRMNGNVLIPIDPAGRVLELILLLEEKWQQRQLGSYQIVLLTNVAYNTLDFAKSHLEWM 313
Query: 370 NQKIRKTFVQR--NMFDFKHIK---PFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWA 534
+ F +R N F+ K I D+ PG VV A+ G L AG + ++F +WA
Sbjct: 314 GDLVTSAFERRRENPFNTKFITICHTMDELKALPPGPKVVLASFGSLEAGPARHLFAEWA 373
Query: 535 PHEQNMVIM 561
+ N+V++
Sbjct: 374 GDKSNLVVL 382
>UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 832
Score = 85.8 bits (203), Expect = 6e-16
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Frame = +1
Query: 25 SVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEK 204
S+ Y+GD+++ + + + + RPD+ I E+TY + ++ E + ++EC K
Sbjct: 167 SLFYSGDFSVFSQKTVEGLKVPRLRPDVAIFEATYGDRLHSNREVEEERLIDIINECKRK 226
Query: 205 GGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIR 384
GK+LIP FALGR+QE+ + ++ + LK + G+ N YK+ + +
Sbjct: 227 KGKMLIPAFALGRSQEVLLTIKKALNKNILKDIKVYVDGMIRDINRTYKLNPLYLKNSLG 286
Query: 385 KTFVQR-NMFDFKHIKPFD-----KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQ 546
K ++ F +I P D K +++ ++++ ++ GML G S +K AP E
Sbjct: 287 KKILKGIEPFYDDNIIPIDDNKLRKKILEDDESLIIISSSGMLTGGYSQYYAEKIAPMEN 346
Query: 547 NMVIM 561
++M
Sbjct: 347 GYIVM 351
>UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 737
Score = 85.8 bits (203), Expect = 6e-16
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKK 183
++ G + ++Y DYN +RHL A ++ RP LLIT+S A I+ +R R+ + +
Sbjct: 163 VKDGEEDIIYAVDYNHKKERHLNGAVLETLSRPSLLITDSFNALNIQTRRRERDTQLMGE 222
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANN---YYKM 354
+ + + + G V+I + GR EL LL+ W ++ Y L + N + K
Sbjct: 223 ILKTMRRHGNVMIAIDTAGRVLELSQLLDQLWRNLDSGLSAYSLAMLNNVSYNVIEFAKS 282
Query: 355 FITWTNQKIRKTF-VQRN---MFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIF 522
+ W + KI K F + RN F + H+ P VV A+ L AG S ++F
Sbjct: 283 QVEWMSDKIMKAFEIGRNNPYQFRYCHLCHSLADLARVPEPKVVLASMMDLTAGFSRDLF 342
Query: 523 KKWAPHEQNMVI 558
+WA + +N VI
Sbjct: 343 VEWADNPKNTVI 354
>UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:
NEQ076 - Nanoarchaeum equitans
Length = 635
Score = 83.8 bits (198), Expect = 2e-15
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G +V+YTGDY + P A I + + ++ ITESTY T + E++FL V E
Sbjct: 352 GYSNVLYTGDYKVKPTFLFDGAQIPQAKVNIAITESTYGDTYHKPREEVEKEFLSFVKEV 411
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVYFALGLTEKANNYYKMFITWTN 372
+++ GK+LIPV +GRAQE+ LL L + P+Y G+ + + + +
Sbjct: 412 IKRKGKLLIPVLGVGRAQEILYLLVKSIRANKLDEVPIYLD-GVVWEITAIHTAYPEYLK 470
Query: 373 QKIR-KTFVQRNMF--DFKHIKPFDK-SYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
++IR K +N F F H P ++ + + ++ AT GML G S+ K A
Sbjct: 471 EEIRNKILAGKNPFIDKFVHRAPRNREEIVYSTEPSIILATSGMLVGGPSVQYLKLMAED 530
Query: 541 EQNMV 555
+N +
Sbjct: 531 PKNAI 535
>UniRef50_Q980D0 Cluster: MRNA 3'-end processing factor, putative;
n=4; Sulfolobaceae|Rep: MRNA 3'-end processing factor,
putative - Sulfolobus solfataricus
Length = 492
Score = 82.6 bits (195), Expect = 6e-15
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 3/188 (1%)
Frame = +1
Query: 7 IRVGSQS--VVYTGDYNMTPDRHLGAAWIDKCRP-DLLITESTYATTIRDSKRCRERDFL 177
I+V S+ + +TGD N+T + + A I+ ++L+ ESTY +++ E DF
Sbjct: 220 IKVSSEKGVIAFTGDINLTETKLMKPAEIENIGDANVLVMESTYGKFNHPNRKDVENDFY 279
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMF 357
KV E VE GG VL+P F+L R+QE+ +L ER N YPVY+ G++ + F
Sbjct: 280 DKVMEVVESGGTVLVPAFSLARSQEVLSVLA---ER-NFPYPVYYD-GMSREITEIMLGF 334
Query: 358 ITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAP 537
+ N R +++ +F ++K ++ + V+ A+ GML G ++ FKK +
Sbjct: 335 KEFLN---RPDLLKKAYDNFNYVKGWEDRHRAWKEKGVIVASAGMLKGGPAVYYFKKLSE 391
Query: 538 HEQNMVIM 561
+ +N V +
Sbjct: 392 NSKNAVFL 399
>UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence;
n=5; Eutheria|Rep: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence
- Mus musculus (Mouse)
Length = 412
Score = 82.2 bits (194), Expect = 8e-15
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKK 183
++ G + +VY D+N + HL ++ RP LLIT+S AT ++ ++ R+ L
Sbjct: 163 VKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTN 222
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANN---YYKM 354
V E + G VLI V GR EL LL+ W + VY L + N + K
Sbjct: 223 VLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKS 282
Query: 355 FITWTNQKIRKTFVQR--NMFDFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIF 522
+ W + K+ + F + N F F+H+ P VV A+ L G S ++F
Sbjct: 283 QVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLF 342
Query: 523 KKWAPHEQNMVIM 561
+W +N +I+
Sbjct: 343 IQWCQDPKNSIIL 355
>UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=26; Coelomata|Rep: Cleavage and
polyadenylation specificity factor subunit 2 - Homo
sapiens (Human)
Length = 782
Score = 82.2 bits (194), Expect = 8e-15
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKK 183
++ G + +VY D+N + HL ++ RP LLIT+S AT ++ ++ R+ L
Sbjct: 163 VKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTN 222
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANN---YYKM 354
V E + G VLI V GR EL LL+ W + VY L + N + K
Sbjct: 223 VLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKS 282
Query: 355 FITWTNQKIRKTFVQR--NMFDFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIF 522
+ W + K+ + F + N F F+H+ P VV A+ L G S ++F
Sbjct: 283 QVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLF 342
Query: 523 KKWAPHEQNMVIM 561
+W +N +I+
Sbjct: 343 IQWCQDPKNSIIL 355
>UniRef50_A1RXC5 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 428
Score = 81.0 bits (191), Expect = 2e-14
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDK-CRPDLLITESTYATTIRDSKRCRERDFLKK 183
I S +V+YTGDY++ L A I + + D++I ESTYA + ER+F+K
Sbjct: 155 IETPSLNVLYTGDYSLHDTCLLRGAGISEFSKADVVIMESTYAEYDHPPREEVEREFVKT 214
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFIT 363
V E VE GG IP FA+GRAQE+ +L Y +L+ P+Y G+ AN+ I
Sbjct: 215 VLEVVEDGGIAFIPAFAVGRAQEILCVLAKY----DLQVPIYVD-GMARTAND----LIA 265
Query: 364 WTNQKIRKTFVQRNMFDFK-HIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWA 534
+ +R+ + + + +K +D K + PG V+ + GML G S +K
Sbjct: 266 EDSHLLREPSLFKKAVEMSTKVKDWDHRKKILSKPG--VIISPAGMLQGGPSEYYMEKIM 323
Query: 535 PHEQNMVI 558
+E+N VI
Sbjct: 324 ENEKNAVI 331
>UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificity
factor/metal-dependent RNase; n=1; Cenarchaeum
symbiosum|Rep: Cleavage and polyadenylation specificity
factor/metal-dependent RNase - Cenarchaeum symbiosum
Length = 645
Score = 80.2 bits (189), Expect = 3e-14
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT--IRDSKRCRERDF 174
F I G + VY+GD AA + R + L+ ESTY I+ +++ E F
Sbjct: 346 FHIGSGDHNFVYSGDIKFGKSILFEAASWNFPRVETLLIESTYGAKEDIQPTRQEVESAF 405
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKM 354
+ V+ + GGKVLIP+ A+GRAQE+ ++++ Y + + F G+ +A+ ++
Sbjct: 406 INAVNGALADGGKVLIPIPAVGRAQEIMMVIDHYMKSGEMAEAPVFTEGMISEASAIHEA 465
Query: 355 FITWTNQKIRKTFVQR--NMFD---FKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSL 513
+ +++++ ++ N FD F +++ D + + ++ AT GML G L
Sbjct: 466 HPEYLARELKQKILETDDNPFDSEYFTNVEHADGRDEALRDGSPCIILATSGMLEGGPVL 525
Query: 514 NIFKKWAPHEQNMVI 558
FK APH+QN ++
Sbjct: 526 EYFKSIAPHKQNKIL 540
>UniRef50_Q8ZTD5 Cluster: MRNA 3'-end processing factor,
conjectural; n=5; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 430
Score = 79.8 bits (188), Expect = 4e-14
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC--RPDLLITESTYATTIRDSKRCRERDFLK 180
I V VV+TGD+N L A + PD++I E+TYA+T + ER+F++
Sbjct: 150 IEVEGYVVVFTGDFNTVDSNLLRGADLYNIPKNPDVVIMEATYASTDHPPRERLEREFVQ 209
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
V E +E GG VLIP FALGRAQE+ + L Y YP+Y GL + N +
Sbjct: 210 SVKEVLEGGGSVLIPSFALGRAQEILLTLVKYGID---AYPIYVD-GLARQINQIVGRY- 264
Query: 361 TWTNQKIRKTFVQRNMFDFKHIKP---FDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKW 531
++ + + + P K ++ P V+ GML G +L FKK
Sbjct: 265 ---PHLLKDPDLYKKALEISIEVPNAYVRKGAVEEPS--VIITPAGMLKGGAALFYFKKM 319
Query: 532 APHEQNMVIM 561
A +++N + +
Sbjct: 320 AQNKKNGIFL 329
>UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 652
Score = 79.0 bits (186), Expect = 7e-14
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G ++VYTGD+ R L A R + +I ESTY T + ER + +++
Sbjct: 343 GLFNLVYTGDFKYGYTRLLDKANTQFPRVEAVIMESTYGTQDLPPRELAERLLIDIINKT 402
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFAL-----GLTEKANNYYKMFI 360
+EKGG VLIPV A+GRAQE+ +LL + +K P A+ G+ +A + +
Sbjct: 403 IEKGGFVLIPVLAVGRAQEILLLLVDAVQNKLIKSPEGGAVPIYLDGMVYEATAIHAAYP 462
Query: 361 TWTNQKIRKTFVQ-RNMF--DFKH------IK-PFDKSYIDNPGAMVVFATPGMLHAGLS 510
W + +++ ++ N F DF H I+ + + V+ AT GML G S
Sbjct: 463 EWLAKSVKERIIKGENPFLADFVHKVESVSIEGGISREEVLESEPGVILATSGMLTGGPS 522
Query: 511 LNIFKKWAPHEQNMVI 558
L F+K AP +N ++
Sbjct: 523 LEYFRKLAPDPKNSIV 538
>UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 646
Score = 75.4 bits (177), Expect = 9e-13
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT--IRDSKRCRERDF 174
F I G + VY+GD AA + R + L+ ESTY I+ S++ E F
Sbjct: 347 FHIGNGDHNFVYSGDIKFGKSILFEAASWNFPRVETLLIESTYGLKEDIQPSRQEVESAF 406
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKM 354
+ V+ + GGKVLIP+ A+GRAQE+ ++++ Y + + F G+ +A+ ++
Sbjct: 407 INAVNNTLADGGKVLIPIPAVGRAQEIMMVIDHYMKSGEMIEAPVFTEGMISEASAIHES 466
Query: 355 FITWTNQKIRKTFVQR--NMFD---FKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSL 513
+ + +++++ ++ N FD F +I+ D + + ++ AT GML G L
Sbjct: 467 YPEYLARELKQKILETDDNPFDSEYFTNIEHADAREEPMREDSPCIILATSGMLEGGPVL 526
Query: 514 NIFKKWAPHEQNMVI 558
FK AP +++ V+
Sbjct: 527 EYFKNIAPDKKSKVL 541
>UniRef50_Q9YFR8 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 420
Score = 73.3 bits (172), Expect = 3e-12
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
+ V + ++YT D N+ + +G A ++ + D++I ESTY + + E F V
Sbjct: 150 VEVDGRRILYTSDVNVIETKLVGPARLEGAKADVVIVESTYGDSDHPPRSVSEERFYNAV 209
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITW 366
+ V +GG VL+P F++ R QE+ ++L ER +YPV+ G+ + Y +
Sbjct: 210 MDVVSQGGTVLVPAFSVSRGQEIAMILA---ER-GFEYPVWLD-GMIRQVAEIYAANPRF 264
Query: 367 TNQKIRKTFVQRNMFDFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
+ + + M +F+ + + + PG V+ A+ GML G SL +K A +
Sbjct: 265 I---LNPGLLMKVMSEFRIVSGWQDRRRAFKKPG--VIIASAGMLKGGPSLYYARKMATN 319
Query: 541 EQNMVIM 561
++N + M
Sbjct: 320 KKNGIFM 326
>UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0047 -
Methanococcus jannaschii
Length = 428
Score = 72.5 bits (170), Expect = 6e-12
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKCRPDL--LITESTYATTIRDSKRCRERDFLKKVHE 192
+++++YTGD + R A + + D+ LI ESTY +I ++ E F++K+ E
Sbjct: 157 NKTILYTGDVKLRDTRLTKGADLSYTKDDIDILIIESTYGNSIHPDRKAVELSFIEKIKE 216
Query: 193 CVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVY---FALGLTEKANNYYKMFIT 363
+ +GG LIPVFA+ RAQE+ ++L Y N+ P+Y A+ +T+ NY M
Sbjct: 217 ILFRGGVALIPVFAVDRAQEILLILNDY----NIDAPIYLDGMAVEVTKLMLNYKHMLNE 272
Query: 364 WTN-QKIRKT--FVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWA 534
+ +K K ++++ K I+ K N G +V T GML G L K +
Sbjct: 273 SSQLEKALKNVKIIEKSEDRIKAIENLSK----NGG--IVVTTAGMLDGGPILYYLKLFM 326
Query: 535 PHEQNMVIM 561
+ +N +++
Sbjct: 327 HNPKNALLL 335
>UniRef50_Q7QRM8 Cluster: GLP_171_24040_22178; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_171_24040_22178 - Giardia lamblia
ATCC 50803
Length = 620
Score = 70.9 bits (166), Expect = 2e-11
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCR--PDLLITESTYATTIRDSKRCRERDFLKKVH 189
G +VYTGDYN T L A + C D+LITE+TY R R+ L V
Sbjct: 196 GCAKIVYTGDYNTTARTTLPGATLPNCAIGADILITETTYCNISRRPSLYRDSLQLADVA 255
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVYFALGLTEKANNYYKMFITW 366
E + + G+VL+P A+G Q++ + + ++WER L K ++ A G+ ++ + ++ +
Sbjct: 256 ETLRQNGRVLLPTSAMGLCQDIIVKVWSFWERFRLNKNKLFLATGMIKQMTDAQRILGNY 315
Query: 367 TNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGA 465
+ T ++ + ++ FD+ YI G+
Sbjct: 316 SLDTTPFT----SLPIYHRMREFDRRYIIPAGS 344
>UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation
factor; n=1; Oikopleura dioica|Rep: Similar to cleavage
and polyadenylation factor - Oikopleura dioica
(Tunicate)
Length = 765
Score = 68.9 bits (161), Expect = 7e-11
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Frame = +1
Query: 22 QSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITE-STYATTIRDSKRCRERDFLKKVHEC 195
+ VY D N + HL +D +P L+IT+ STY ++ + R ++++
Sbjct: 167 EEYVYCVDVNHKRETHLNGIQLDAFDKPTLMITDCSTYGYQ-QERRAKRTERLVQRIQNT 225
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYW--ERMNL-KYPVYFALGLTEKANNYYKMFITW 366
KGG VLI GR+ E+ ++LE W ER L + + + K I W
Sbjct: 226 TSKGGNVLITTDTAGRSLEMALMLEGIWNDERYGLGRVNLVMVSNVATSTIEAAKGMIEW 285
Query: 367 TNQKIRKTFVQR--NMFDFKHIK--PFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWA 534
++KI F + N+FD +K + P V+ ATP + G S +F A
Sbjct: 286 MSEKIISKFTHKRENIFDLTKMKLRSSIQEIARIPEPKVILATPMDMDTGFSRELFVMMA 345
Query: 535 PHEQNMVIM 561
H +N VIM
Sbjct: 346 AHPKNAVIM 354
>UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 784
Score = 68.5 bits (160), Expect = 1e-10
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWI--DKCRPDLLITESTYATTIRDSKRC--RERDF 174
I G+ S+VY DYN + HL + + D +P LLIT+S K+ R++
Sbjct: 164 ITKGTYSIVYAIDYNHRNEGHLDSLQLTSDILKPSLLITDSKGVDKTLAFKKTITRDQSL 223
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMN--LKYPVYFALGLTEKANNYY 348
++++ + GG VLIPV GR EL + +E YW + Y V F + +
Sbjct: 224 FEQINRNLRDGGNVLIPVDTAGRVLELLLCIENYWSKNKSLALYSVVFLGRFSFSVCQFA 283
Query: 349 KMFITWTNQKIRKTFVQ--RNMFDFKHIKPFD--KSYIDNPGAMVVFATPGM-LHAGLSL 513
+ + + + F Q N F FKHIK + + P V T L G S
Sbjct: 284 RSQLEFMSSTASVKFEQNIENPFSFKHIKILSSLEELQELPDTNKVILTSSQDLETGFSR 343
Query: 514 NIFKKWAPHEQNMVI 558
+F +W + +++
Sbjct: 344 ELFIQWCSDPKTLIL 358
>UniRef50_A3DMW0 Cluster: Beta-lactamase domain protein; n=1;
Staphylothermus marinus F1|Rep: Beta-lactamase domain
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 427
Score = 68.1 bits (159), Expect = 1e-10
Identities = 50/178 (28%), Positives = 84/178 (47%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKG 207
++YTGD N L A + + D LI ESTY +T + E+ + + E + G
Sbjct: 158 ILYTGDVNTIQTWTLSRAELWPLKIDTLIIESTYGSTKHPPRHYTEKRLVDAIEEVTDSG 217
Query: 208 GKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRK 387
G VLIP F++GR+QE+ L++ ++ VY G++ + N Y ++
Sbjct: 218 GTVLIPAFSVGRSQEVMCLVQAELPHLD----VYLD-GMSREITNIYLRHKSFLRDPSLF 272
Query: 388 TFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
+N F + + K++ PG V+ ++ GML G S+ KK A +N V +
Sbjct: 273 EKAVQNTFFIRGWQDRRKAW-KKPG--VIISSAGMLKGGPSVYYLKKIANEPKNAVFL 327
>UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificity
factor, 100 kDa subunit; n=2; Thermus thermophilus|Rep:
Cleavage and polyadenylation specificity factor, 100 kDa
subunit - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 431
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
DL++ E TY R R+FL+ + + + +GGKVLIP FA+ RAQE+ +L T+
Sbjct: 181 DLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGH 240
Query: 283 RMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ-RNMF---DFKHIKPFDKSYI 450
R+ + P+Y + + Y + + +++++ F+Q +N F + ++ + S
Sbjct: 241 RLP-RAPIYLDSPMAGRVLALYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKA 299
Query: 451 DN--PGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
N PG MVV A GML G L+ K +N ++
Sbjct: 300 LNRAPGPMVVLAGSGMLAGGRILHHLKHGLSDPRNALV 337
>UniRef50_O29718 Cluster: MRNA 3'-end processing factor, putative;
n=1; Archaeoglobus fulgidus|Rep: MRNA 3'-end processing
factor, putative - Archaeoglobus fulgidus
Length = 407
Score = 66.9 bits (156), Expect = 3e-10
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G +++Y+GD + R L A D D+LI ESTY T ++ ER F++ V +
Sbjct: 142 GDVNILYSGDIRLEETRLLEGANTDYPETDILIVESTYFGTEHPDRKELERAFVESVIDT 201
Query: 196 VEKGGKVLIPVFALGRAQELCILLETY 276
++ GG +IP FA+GR QE+ ++LE Y
Sbjct: 202 LDMGGHAIIPAFAVGRTQEVLMILERY 228
>UniRef50_Q0W8H2 Cluster: MRNA 3-end processing factor; n=5;
Euryarchaeota|Rep: MRNA 3-end processing factor -
Uncultured methanogenic archaeon RC-I
Length = 432
Score = 66.9 bits (156), Expect = 3e-10
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK 183
++ G QS++YTGD T R L + I D L+ ESTY ++ E F++
Sbjct: 163 YVENGKQSLLYTGDIKNTDTRLLRGSKIHYPEADALMIESTYFGKDHPDRQKLEEKFIES 222
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFIT 363
+ ++ GG V+IP FA+GR QE+ ++L+ + + P Y G+ + + +
Sbjct: 223 IRYTLDIGGNVVIPSFAIGRTQEILLILKEH------RIPSYVD-GMGREVTDIFLK--- 272
Query: 364 WTNQKIRKTFVQRNMFDFK-HIK-PFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAP 537
+ +R R+ + + +K KS +D P VV T GML+ G L KK
Sbjct: 273 -EPEYLRDPGRLRSAYGYSTTVKGSMRKSLMDEP--CVVVTTAGMLNGGPVLTYLKKIYD 329
Query: 538 HEQNMVIM 561
+ +N VI+
Sbjct: 330 NPKNKVIL 337
>UniRef50_O17403 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=2; Caenorhabditis|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Caenorhabditis elegans
Length = 843
Score = 66.5 bits (155), Expect = 4e-10
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 9/193 (4%)
Frame = +1
Query: 10 RVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKKV 186
RV + +VY D+N +RHL D RP LLIT + + + + ++ R+ + K+
Sbjct: 163 RVTGEDIVYCVDFNHKKERHLNGCSFDNFNRPHLLITGAHHISLPQMRRKDRDEQLVTKI 222
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANN---YYKMF 357
V + G +I + GR EL LL+ W + Y + ++ A++ + K
Sbjct: 223 LRTVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQ 282
Query: 358 ITWTNQKIRK---TFVQRNMFDFKHIK--PFDKSYIDNPGAMVVFATPGMLHAGLSLNIF 522
+ W N+K+ K + + N F KH+ + + VV + + +G S +F
Sbjct: 283 LEWMNEKLFKYDSSSARYNPFTLKHVTLCHSHQELMRVRSPKVVLCSSQDMESGFSRELF 342
Query: 523 KKWAPHEQNMVIM 561
W +N VI+
Sbjct: 343 LDWCSDPRNGVIL 355
>UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificity
factor; n=9; Euryarchaeota|Rep: Cleavage and
polyadenylation specificity factor - Thermoplasma
volcanium
Length = 639
Score = 66.1 bits (154), Expect = 5e-10
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRER---DFLKKV 186
G +VV +GD A R + +TESTY D RE + +
Sbjct: 346 GLYNVVLSGDVKFEKTWLFNPANNKFPRAETFMTESTYGGR-DDYSFTREEATETLVDVI 404
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITW 366
+ ++GG VLIPVFA+GR+QE+ I+LE + + G+ +A + + +
Sbjct: 405 NRTHDRGGSVLIPVFAVGRSQEVMIVLEDAMRNGRIPQMNVYLDGMIMEATAIHAAYPEY 464
Query: 367 TNQKIRKTFVQR--NMF---DFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIFK 525
N+++R+ + R N F FK ++ + + ++P + VV AT GM++ G + FK
Sbjct: 465 LNKELREAIMVRKENPFLSQIFKKVETREQREDIAEDPESKVVLATSGMMNGGPVMEYFK 524
Query: 526 KWAPHEQNMVI 558
WA + ++ ++
Sbjct: 525 AWAGNPKHTLV 535
>UniRef50_A7D2T2 Cluster: Beta-lactamase domain protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Beta-lactamase
domain protein - Halorubrum lacusprofundi ATCC 49239
Length = 414
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/85 (36%), Positives = 53/85 (62%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G+ ++YTGD++ T D+ L + D+ D++I ESTYA + +R E ++++V
Sbjct: 152 GNTRLLYTGDFH-TDDQRLVSGTTDRPDADVVICESTYADVTHEDRRVVEDRWVERVRTT 210
Query: 196 VEKGGKVLIPVFALGRAQELCILLE 270
+ +GG V+ P FA+GR QEL ++ E
Sbjct: 211 LWEGGTVVAPAFAIGRTQELMLVAE 235
>UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 639
Score = 62.5 bits (145), Expect = 7e-09
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 6/187 (3%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT--IRDSKRCRERDFLKKVH 189
G ++VYTGD L A+ R ++LI ESTY + + S+ + + K V
Sbjct: 341 GLINIVYTGDMKYARTMLLDPAYNKFPRAEVLIIESTYGSKSDVLPSEDDAKLELAKIVL 400
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWT 369
E +E+ G VLIPV A+GRAQE+ + L ++ + F G+ ++ + + F +
Sbjct: 401 ETIERKGVVLIPVLAVGRAQEVLLALLDLMKKGAVPRVPIFIEGMIDEVSAVHMTFPEYL 460
Query: 370 NQKIRK-TFVQRNMFDFKH---IKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAP 537
+ IR+ + N F ++ I+ + I ++ AT GML G L+ + A
Sbjct: 461 SATIREMIYRDENPFTSENIHVIRGEAREDITEKKPSIILATSGMLTGGPVLDYLRILAD 520
Query: 538 HEQNMVI 558
E + ++
Sbjct: 521 DENSSLV 527
>UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1;
Pyrobaculum islandicum DSM 4184|Rep: Beta-lactamase
domain protein - Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189)
Length = 640
Score = 62.5 bits (145), Expect = 7e-09
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYA--TTIRDSKRCRERDFLKKVH 189
G +++YTGD+ R L A R ++LI ESTY ++ + E K V
Sbjct: 339 GRYNILYTGDFKYGKTRLLNRAVSKFKRVEMLIMESTYGGRDDVQPPRVEAENALAKHVA 398
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYWE-RMNLKYPVYFALGLTEKANNYYKMFITW 366
E V +GGKVLIP F+ GR QE+ +L E + + PVY G+ + N Y M+ +
Sbjct: 399 EAVSRGGKVLIPAFSTGRGQEILYILNKMIEGGLIPRVPVYVD-GMIVETLNAYLMYPHY 457
Query: 367 TNQKI 381
N ++
Sbjct: 458 LNPEV 462
>UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor,
conjectural; n=4; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 634
Score = 62.1 bits (144), Expect = 9e-09
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYA--TTIRDSKRCRERDFLKKVH 189
G +++YTGD+ R L A R ++LI ESTY ++ + E K V
Sbjct: 333 GRYNILYTGDFKYGKTRLLNRAANKFKRVEMLIMESTYGGRDDVQPPRVEAENALAKHVS 392
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYWE-RMNLKYPVYFALGLTEKANNYYKMFITW 366
+ V +GGKVLIP F+ GR QE+ +L E + + PVY G+ + N Y M+ +
Sbjct: 393 DAVTRGGKVLIPAFSTGRGQEILYILNKMMEGGLIPRVPVYVD-GMIVETLNVYLMYPHY 451
Query: 367 TNQKI 381
N ++
Sbjct: 452 LNPEV 456
>UniRef50_UPI00015BB212 Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 428
Score = 60.5 bits (140), Expect = 3e-08
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKG 207
++YTGD ++ + LG A + D+LI E+TY + + E F+ V E ++ G
Sbjct: 162 LLYTGDVRLSETQLLGGADVSGLEADVLIIEATYGKSDHPPRENVEALFVSDVREVLQGG 221
Query: 208 GKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRK 387
G VL+P F +GR QE+ +L + ++ VY L N ++ I N+K K
Sbjct: 222 GTVLVPAFGVGRGQEILAVLADH----EVEGDVY----LDGMVRNVTELLIQGENKKFLK 273
Query: 388 T--FVQRNMFDFKHIKPF-DKSYIDNPGAMVVFATPGMLHAGLSLNIFKK 528
+++ + K ++ + D+ + V+ A+ GML G SL +K
Sbjct: 274 NPDMLEKAYEEAKVVRGWQDRRRVWKRNG-VIIASAGMLRGGPSLYYARK 322
>UniRef50_Q5QU60 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=2; Alteromonadales|Rep: Predicted
exonuclease of the beta-lactamase fold - Idiomarina
loihiensis
Length = 452
Score = 60.5 bits (140), Expect = 3e-08
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
DLL+ ESTY + E + V+E + GG +LIP F++GRAQ L LL +
Sbjct: 200 DLLLLESTYGNRLHAKTENAEEQLEEVVNETAQSGGVLLIPSFSVGRAQLLQYLLVKLMD 259
Query: 283 RMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFD--KSYID 453
+ K P+Y + + Y+ F + K+ + R ++ + D K+
Sbjct: 260 EGRVPKQPIYLDSPMAINVSGLYQRF--HSLHKLTDSDCSRTFARVEYTRSVDESKAIAS 317
Query: 454 NPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
G ++ A GM G L+ FK+W + V+
Sbjct: 318 QSGPHIIIAGSGMATGGRILHHFKRWLSDHRATVL 352
>UniRef50_Q9HS54 Cluster: MRNA 3'-end processing factor homolog;
n=10; Euryarchaeota|Rep: MRNA 3'-end processing factor
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 641
Score = 60.5 bits (140), Expect = 3e-08
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYA--TTIRDSKRCRERDF 174
F I G +V ++GD + R A D R + L+ ESTY + + ER
Sbjct: 340 FHIGDGLYNVAFSGDIHYDDTRLFNGAVNDFPRVETLVMESTYGGRNDYQTDQEDSERKL 399
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVYFALGLTEKANNYYK 351
+ ++E E GGKVLIP FA+GR+QE+ ++LE + + P++ G+ +A +
Sbjct: 400 KRVINETYEDGGKVLIPAFAVGRSQEMMLVLEEAMREGEIPEMPIHLD-GMIWEATAIHT 458
Query: 352 MFITWTNQKIRKTFV--QRNMF---DFKHIK--PFDKSYIDNPGAMVVFATPGMLHAGLS 510
+ + +R N F F HI ++ + + ++ +T GM+ G
Sbjct: 459 TYPEYLRDDLRDRIFHSDSNPFLAPQFNHIDGGEEERQAVADDDQCIILSTSGMVSGGPI 518
Query: 511 LNIFKKWAP 537
++ + AP
Sbjct: 519 MSWLEHIAP 527
>UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4;
Halobacteriaceae|Rep: MRNA 3'-end processing factor -
Haloarcula marismortui (Halobacterium marismortui)
Length = 411
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G ++YTGD++ T D+ L A + D +I ESTY+ D + E F++ V
Sbjct: 148 GDTRLLYTGDFH-TDDQRLVAGTTARPDADAVICESTYSDVDHDPRETVEGRFVESVETT 206
Query: 196 VEKGGKVLIPVFALGRAQELCILLETY 276
+ +GG V++P FA+GR QE+ ++ E +
Sbjct: 207 LWEGGTVVVPAFAIGRTQEMLLVCEAH 233
>UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 671
Score = 59.7 bits (138), Expect = 5e-08
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Frame = +1
Query: 16 GSQSVVYTGD---YNMTPDRH---LGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFL 177
G +++YT D Y + DR L A R + LI E+TY + + E + +
Sbjct: 354 GLYNILYTADFKFYRIKNDRSTRLLPPAEYSFQRVEALIMEATYGSKETQPRAEAEEELI 413
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVY---FALGLTEKANNY 345
V++ ++GGK+LIPV A+GR QE+ ++L + + P+Y +T NY
Sbjct: 414 NLVNKVYKRGGKLLIPVMAVGRGQEILVVLNEALRSGKIPEIPIYVDGMVYEVTAVYTNY 473
Query: 346 YKMFITWTNQKIRKTFVQ-----RNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLS 510
++ + +I K ++ H K + Y D P ++ +T GM++ G
Sbjct: 474 PELLVKPIRDRILKQGENPFEGPTTVYVTDHYKRDEAMYSDKPA--IILSTSGMMNGGPI 531
Query: 511 LNIFKKWAPHEQN 549
+ FK A +N
Sbjct: 532 VEYFKYLADDPRN 544
>UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 786
Score = 58.8 bits (136), Expect = 8e-08
Identities = 27/85 (31%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 25 SVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKKVHECVE 201
S+++TGD ++ R + ++ + D++I E TY S++ +E++ + + + +
Sbjct: 172 SILHTGDISVGHHRTITGVDLNTLPQVDMMICEGTYGNRSHKSRKDQEQNVVATIQQVIG 231
Query: 202 KGGKVLIPVFALGRAQELCILLETY 276
GG+VLIP FA+GRAQEL ++L+ +
Sbjct: 232 HGGRVLIPAFAVGRAQELILILKAF 256
>UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation
specificity factor subunit, putative; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: cleavage and polyadenylation
specificity factor subunit, putative - Entamoeba
histolytica HM-1:IMSS
Length = 452
Score = 57.2 bits (132), Expect = 2e-07
Identities = 48/185 (25%), Positives = 80/185 (43%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
I + + +VY+GD++++P L A I D LITEST + +R + +
Sbjct: 149 ILLDGKRIVYSGDFDVSPSFLLRGAEITSHAIDYLITESTCINE-QHKRRYELYHYADCL 207
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITW 366
GG V I V +GR QE+ ++ + R +L P+ + G+ K N YK + W
Sbjct: 208 LSAARSGGSVQIVVNGIGRGQEVMGIVLSIVRRCHLTMPLCCSGGMLTKIANEYKKWKNW 267
Query: 367 TNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQ 546
+ + + F + +YI TP L G SL +F+K +
Sbjct: 268 LRDDVHELV---DNFSKYQMLSAQTNYI-------AITTPATLTKGHSLEVFEKIKTDPK 317
Query: 547 NMVIM 561
+ VI+
Sbjct: 318 SFVIL 322
>UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=1;
uncultured gamma proteobacterium|Rep: Predicted
exonuclease of the beta-lactamase fold involved in RNA
processing - uncultured gamma proteobacterium
Length = 426
Score = 56.4 bits (130), Expect = 4e-07
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D LI ESTY D + K + E GGK++IP FA+GR QEL +L ++
Sbjct: 167 DALIIESTYGNRSHDPISDAGEEMAKTIREVAAAGGKIIIPAFAIGRTQELIYMLHKLYD 226
Query: 283 RMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFV-QRN-MFDFKHIK 429
+ + + PV+ L A + ++ + + +++ + F+ Q N F F+ +K
Sbjct: 227 QNRIPEIPVFIDSPLAVHATDVFRKYAAYYDREAFRIFLAQHNDPFAFQMLK 278
>UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the
beta-lactamase family; n=2; Proteobacteria|Rep:
Predicted exonuclease of the beta-lactamase family -
Bdellovibrio bacteriovorus
Length = 452
Score = 55.6 bits (128), Expect = 7e-07
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK-VHE 192
G +S+ ++GD D + A + D L+ ESTY RD ++ LK+ + E
Sbjct: 172 GEKSIHFSGDLGRYNDPLMPAPE-PPAKADYLVMESTYGD--RDHSPKTSKEVLKECILE 228
Query: 193 CVEKGGKVLIPVFALGRAQELCILLETYWE--RMNLKYPVYFALGLTEKANNYYKMFITW 366
V+ G +LIP FA+GRAQ L + + + PVYF + + Y+ + +
Sbjct: 229 IVKSRGVLLIPSFAVGRAQNLLFEITELKRDGEVPAQIPVYFNSPMGHEVALLYEKYHPF 288
Query: 367 TNQKIRKTFVQRNMFDFKHIKPFDKSYI---DNPGAMVVFATPGMLHAGLSLNIFKKWAP 537
++ M + IK ++S D G ++ A GML G L+ K + P
Sbjct: 289 --HRLGSGQFAEVMSEVHTIKTAEESRALNDDKSGPKIIIAASGMLTGGRVLHHLKAFGP 346
Query: 538 HEQNMVIM 561
+N+V++
Sbjct: 347 DSRNIVLL 354
>UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein -
Arthrobacter sp. (strain FB24)
Length = 461
Score = 55.2 bits (127), Expect = 1e-06
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMT------PDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRER 168
+ VG SV +TGD T P R LGAA D+L+TESTY + S E
Sbjct: 176 LAVGQHSVHFTGDLGRTDDPLMFPPRGLGAA-------DILVTESTYGNR-KHSSLDPEL 227
Query: 169 DFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLK-YPVYFALGLTEKANNY 345
+ + +K G ++I FA+GRA+ L + L + + PVY + A+
Sbjct: 228 QLGEIITRVAKKNGVIMIAAFAVGRAETLMLHLSRLRSKNAIPDIPVYLNSPMAIDASGM 287
Query: 346 YKMFITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDN--PGAMVVFATPGMLHAGLSLNI 519
Y+ ++++ + K + D S + N G MV+ + GML G L+
Sbjct: 288 YQRHPD--EHRLKQPEYEDMYKVAKMTRTVDDSKLLNLRGGPMVIISASGMLTGGRILHH 345
Query: 520 FKKWAPHEQNMVIM 561
++ P +N +I+
Sbjct: 346 IAEYGPDPKNAIIL 359
>UniRef50_A2BK26 Cluster: Putative exoribonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Putative
exoribonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 427
Score = 54.8 bits (126), Expect = 1e-06
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D+L+TE+TY +++ + E+ L + E +++ G VLIP F++ R QE+ ++L +
Sbjct: 188 DILVTEATYGSSLHPPRANAEKRLLSIIEETIDRKGTVLIPAFSIARGQEIMMILAEH-- 245
Query: 283 RMNLKYPVYFALGLTEKANNYYKMFITWTN--QKIRKTFVQRNMFDFKHIKPFDKSYIDN 456
+ PVY G+ + + + N +RK + + N+ + + +K++ +
Sbjct: 246 --DPGVPVYVD-GMIRQITEIFLENPEYINNVNLLRKAYEEFNI--VRGWRDRNKAWRE- 299
Query: 457 PGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
V+ A+ GML G SL K+ + +N +I+
Sbjct: 300 --PAVIIASAGMLKGGPSLYYLKRLGSNPRNAIIL 332
>UniRef50_Q2Q0D8 Cluster: Putative mRNA processing factor; n=1;
uncultured organism HF10_3D09|Rep: Putative mRNA
processing factor - uncultured organism HF10_3D09
Length = 437
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/96 (30%), Positives = 49/96 (51%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
+ ++ V+++GD++ T D L + D+L E TY K F+++V
Sbjct: 169 VETPNKKVLFSGDFD-TRDSQLTIG-AKPVKSDVLFVEGTYGGRDHPPKEEENERFIERV 226
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNL 294
E V +GG L+P FA GR Q++ +LL Y +N+
Sbjct: 227 IEVVNRGGTALVPAFANGRTQDVVMLLHKYLPELNV 262
>UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14;
Proteobacteria|Rep: Beta-lactamase-like - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 453
Score = 53.6 bits (123), Expect = 3e-06
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGA-AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV-H 189
GS+S++++GD D L A + +D D L+ ESTY + K L +V +
Sbjct: 173 GSRSLLFSGDIGRPNDLVLKAPSQMDGA--DYLVVESTYGDRLH--KYSDPLTVLGEVIN 228
Query: 190 ECVEKGGKVLIPVFALGRAQEL--CILLETYWERMNLKYPVYFALGLTEKANNYYKMFIT 363
+GG V+IP FA+GRAQ L CI L ++ PVY + A N ++F+
Sbjct: 229 RTAARGGVVVIPAFAVGRAQSLMYCIHLLKAQGVIHDNLPVYLN---SPMAANATQVFLK 285
Query: 364 WTNQKIRKTFVQ-RNMFDFKHI--KPFDKSYID-NPGAMVVFATPGMLHAGLSLNIFKKW 531
++ +R T Q + M HI P + ++ G MV+ A GM G ++ K +
Sbjct: 286 HKSE-LRLTAAQCKAMTHTAHIVGTPEESRLLNTRKGPMVIIAASGMATGGRVVHHLKAF 344
Query: 532 APHEQNMVI 558
AP +N ++
Sbjct: 345 APDPRNTIL 353
>UniRef50_A1ID10 Cluster: Metallo-beta-lactamase family protein;
n=2; Desulfobacterales|Rep: Metallo-beta-lactamase
family protein - Candidatus Desulfococcus oleovorans
Hxd3
Length = 525
Score = 53.6 bits (123), Expect = 3e-06
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Frame = +1
Query: 10 RVGSQSVVYTGDYN-----MTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDF 174
R G + + YTGD + D L A D+ DLLI ESTY + R
Sbjct: 221 RDGVKRICYTGDLGRFDKAIIRDPTLDFAPEDR-NIDLLIIESTYGDREHEPVADLTRRL 279
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILL-ETYWERMNLKYPVYFALGLTEKANNYYK 351
++E ++KGG VLIP FA GR QE+ + E Y + PVY L +
Sbjct: 280 GVALNETLDKGGSVLIPAFAYGRTQEILYSIHELYISGQVPRVPVYVDSPLASNLTRVFS 339
Query: 352 MFITWTNQKIRKTFVQR--NMFDFKHIKPFDKSYIDNPGAM------VVFATPGMLHAGL 507
+++ KTF+++ N F F+ + F +S ++ M +V GM G
Sbjct: 340 EHPEAYDREAHKTFLEKGYNPFVFQDVL-FTESVEESIEIMKDQRPHIVVTASGMCEFGR 398
Query: 508 SLNIFKKWAPHEQNMVIM 561
L+ + +E+N +++
Sbjct: 399 ILHHLRYKIHNEKNAILI 416
>UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 421
Score = 53.6 bits (123), Expect = 3e-06
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECV 198
++ + YTGD R L +D DLLITESTYA T + ++ E + ++ +E +
Sbjct: 154 NKRLFYTGDIKTNGSRMLREMDLDIGEIDLLITESTYAMTEQKPRKESEAELIEFANEVM 213
Query: 199 EKGGKVLIPVFALGRAQEL-CIL 264
++ G + IP F++ R+QE+ CIL
Sbjct: 214 DRKGILFIPSFSVERSQEIACIL 236
>UniRef50_Q07ZA5 Cluster: Beta-lactamase domain protein; n=3;
Alteromonadales|Rep: Beta-lactamase domain protein -
Shewanella frigidimarina (strain NCIMB 400)
Length = 521
Score = 53.2 bits (122), Expect = 4e-06
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 16/190 (8%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHEC 195
G+ VV++GD T L A+ R D L+ ESTY ++ R + +
Sbjct: 230 GNHRVVFSGDLGATYAPLL-ASPKSPYRADTLVIESTYGDKNHQGRKERSKQLKNIIESA 288
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGL---TEKANNY---YKMF 357
V+ G VLIP F++GR QEL E R N PV+ + + + A N+ Y+ F
Sbjct: 289 VKDNGVVLIPAFSIGRTQELLYEFEHIIHR-NKHNPVWENIDIIVDSPMAANFTQKYRQF 347
Query: 358 IT-WTNQKIRKTFVQRNMFDFKHIKPFDK--------SYIDNP-GAMVVFATPGMLHAGL 507
T W N+ K R+ F + D +Y+D+ ++ A GM G
Sbjct: 348 KTLWDNEAKGKLAQGRHPLYFNQLITIDSHQDHLSVINYLDSTHKPAIIIAASGMCTGGR 407
Query: 508 SLNIFKKWAP 537
N ++ P
Sbjct: 408 ITNYLARFLP 417
>UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Planctomyces maris DSM
8797|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Planctomyces maris DSM 8797
Length = 464
Score = 52.8 bits (121), Expect = 5e-06
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
++LI+ESTY + + + + + + E G+V+IP F+LGR Q++ L +
Sbjct: 205 EVLISESTYGNRVHEKASDVKEELFQILDEAYRLEGRVIIPAFSLGRTQQIIYYLNDLYN 264
Query: 283 RMNLKY-PVYFALGLTEKANNYYKMFITWTNQKIRKTF-VQRNMFDFK---HIKPFDKSY 447
L + P++ L+ + + ++ + + +R+ R+ F F ++ ++S
Sbjct: 265 EKRLPHIPIFVDSPLSTRLVSVFRAHLQDMDDNVREVISTDRDPFGFSLLDYVSSREESI 324
Query: 448 IDN--PGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
N GA VV A GM G + K + +N V++
Sbjct: 325 ALNKRKGAFVVIAGSGMCENGRVRHHLKNGISNVENTVVL 364
>UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;
n=1; Cenarchaeum symbiosum|Rep: Exonuclease of the
beta-lactamase fold - Cenarchaeum symbiosum
Length = 417
Score = 52.8 bits (121), Expect = 5e-06
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 22 QSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVE 201
+ + YTGD ++ R L A +D D+LITESTY+ T + ++ E + ++ +E ++
Sbjct: 151 RKLFYTGDIHVRGSRMLREADLDVGEIDMLITESTYSQTNQMPRQESEGNLIEFANEVMD 210
Query: 202 KGGKVLIPVFALGRAQEL-CIL 264
+ G + IP F++ R+QE+ C+L
Sbjct: 211 RKGTLFIPSFSVERSQEVACVL 232
>UniRef50_Q896M4 Cluster: Cleavage and polyadenylation specificity
factor; n=3; Clostridiaceae|Rep: Cleavage and
polyadenylation specificity factor - Clostridium tetani
Length = 506
Score = 51.6 bits (118), Expect = 1e-05
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D LI E+TY + ++ R+ + + ++GG V+IP FA+GR QE+ L Y E
Sbjct: 205 DYLILETTYGDRLHENLDTDLRELVDIIKMTFQRGGNVVIPSFAVGRTQEVVYALNKYVE 264
Query: 283 RMNLK-YPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ-RNMFDFKHIK----PFDKS 444
LK VY L ++ ++ F + +++ + N DF+ +K P +
Sbjct: 265 NNLLKDIKVYVDSPLAYESTEVFRKFTKYYDKEACNLLISGDNPLDFEGLKFTKSPEESV 324
Query: 445 YID--NPGAMVVFATPGMLHAG 504
I+ GA+++ A+ GM AG
Sbjct: 325 QINKIKNGAIIISAS-GMCEAG 345
>UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1;
Shewanella sediminis HAW-EB3|Rep: Beta-lactamase domain
protein - Shewanella sediminis HAW-EB3
Length = 526
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/86 (37%), Positives = 42/86 (48%)
Frame = +1
Query: 13 VGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 192
V VV++GD T L A+ R D LI ESTY ++ R + K + +
Sbjct: 197 VNKHRVVFSGDLGATYTPLL-ASPKSPYRADTLIIESTYGDRNHQGRKTRTQSLRKVIEK 255
Query: 193 CVEKGGKVLIPVFALGRAQELCILLE 270
V G VLIP F++GR QEL LE
Sbjct: 256 AVSDNGVVLIPAFSIGRTQELLYELE 281
>UniRef50_Q55470 Cluster: Uncharacterized protein sll0514; n=1;
Synechocystis sp. PCC 6803|Rep: Uncharacterized protein
sll0514 - Synechocystis sp. (strain PCC 6803)
Length = 554
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCR---PDLLITESTYATTIRDSKRCRERDFLKKVHECV 198
V+YTGDY ++ + + + R PD+LI E Y +R +E+ F++ + +
Sbjct: 155 VIYTGDYCLSHLQLVDGLALTPLRGLKPDVLILEGHYGNRRLPHRRQQEKQFIQAIETVL 214
Query: 199 EKGGKVLIPVFALGRAQELCILLETY 276
KG +L+PV LG AQE+ LL T+
Sbjct: 215 AKGRNILLPVPPLGLAQEILKLLRTH 240
>UniRef50_Q8DE34 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=6;
Vibrionales|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing - Vibrio
vulnificus
Length = 446
Score = 51.2 bits (117), Expect = 2e-05
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLE-- 270
R D L ESTY + +S R ++ ++ GG +LIP F++GR QEL +E
Sbjct: 199 RADYLYIESTYGDKLHESVEERGERLKSIINRSLQDGGTILIPAFSVGRTQELLFDIEQL 258
Query: 271 TYWERMNLKYPVYFALGLTEKANNYYKMF-ITWTNQKIRKTFVQRNMFDFKHIKPFD--- 438
+ + P+ L ++ Y+ F W + R+ V R+ F+ D
Sbjct: 259 IFEHNIGTDIPIILDSPLAKRVTQSYRRFKKLWGKEAKRRLEVHRHPLAFEQCITIDDYR 318
Query: 439 --KSYIDNPGA----MVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
K+ ++ + +V A GM G ++ + P E+ V+
Sbjct: 319 QHKALVNRLASTGEPAIVVAASGMCQGGRIMDYLQALLPDERTDVL 364
>UniRef50_A3WMD7 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=1; Idiomarina baltica OS145|Rep:
Predicted exonuclease of the beta-lactamase fold -
Idiomarina baltica OS145
Length = 460
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
R DLL+ ESTY + R + + V GG +LIP F++GR QEL E
Sbjct: 193 RADLLVLESTYGDRSHGDRSQRTQQLESIIKRAVVDGGAILIPAFSIGRTQELLYEFEQI 252
Query: 277 WER----MNLKYP-VYFALGLTEKANNYYKMF-ITWTNQKIRKTFVQRNMFDFKHIKPFD 438
W + + +P + + K + Y+ W + R+ DF H P D
Sbjct: 253 WHQHACSKDTDFPEIVIDSPMANKVTDIYQHHEALWDATSRSRQAHGRHPLDFSHAHPVD 312
Query: 439 K 441
+
Sbjct: 313 E 313
>UniRef50_Q2S180 Cluster: Ysh1p: subunit of polyadenylation factor
I, putative; n=1; Salinibacter ruber DSM 13855|Rep:
Ysh1p: subunit of polyadenylation factor I, putative -
Salinibacter ruber (strain DSM 13855)
Length = 464
Score = 50.4 bits (115), Expect = 3e-05
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHL-GAAWIDKCRPDLLITESTYATT--IRDSKRCRERD-FLKKVHEC 195
V YT D NM + G + D D+LI EST + R ERD F K + +
Sbjct: 181 VFYTSDTNMQAQTIIPGGEYPDST--DVLILESTQGAEPEAAATSRPEERDRFRKTLSQV 238
Query: 196 VEKGGKVLIPVFALGRAQELCILLETYWER--MNLKYPVYFALGLTEKANNYYKMFITWT 369
+ +GG LIPVF +GRAQE+ +LL + P+Y A + A Y T
Sbjct: 239 LARGGTALIPVFVMGRAQEILVLLGQLKREGAIPADVPIYTAGSMRAIAGVYDDTRNTTP 298
Query: 370 NQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQN 549
+ + + ++ PG MVV ++ M+ LS + ++ +E +
Sbjct: 299 RVDASDEVYAVDQERVPYESEAKREILEGPGIMVV-SSGMMIEPTLSNVLARRMVENEDD 357
Query: 550 MVIM 561
V++
Sbjct: 358 AVLL 361
>UniRef50_A6EB60 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Pedobacter sp. BAL39|Rep:
Metallo-beta-lactamase superfamily protein - Pedobacter
sp. BAL39
Length = 376
Score = 50.0 bits (114), Expect = 4e-05
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHE-CVEKGGKVLIPVFALGRAQELCILLETYW 279
D +I ESTY ++ E + +H+ C+ + GKV+IP F++GR QEL L
Sbjct: 117 DYIIMESTYGDSLHKDLEPIEEALREIIHQTCILRKGKVIIPAFSVGRTQELLFALNAME 176
Query: 280 ERMNLKYPVYF-----ALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFD-- 438
R L Y+ AL TE ++ +++ + ++K ++F FK +K +
Sbjct: 177 LRNILPDVQYYVDSPLALQATEVLRDHPEVYNNGVKEIMKK---DDDIFGFKGLKFIESV 233
Query: 439 ---KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
K+ +P V+ ++ GM G + + + +N ++M
Sbjct: 234 AESKALNSDPRPCVIISSSGMAEGGRVKHHIRNNIGNAKNTILM 277
>UniRef50_Q6CAZ0 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 799
Score = 50.0 bits (114), Expect = 4e-05
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Frame = +1
Query: 25 SVVYTGDYNMTPDRHL-GAAWIDKCRP--DLLITESTYATTIRDSKRCRERDFL--KKVH 189
+VVY D+N D HL GAA++ K L + + R + RD L +
Sbjct: 181 NVVYAVDWNHAKDSHLSGAAFLQKGGQIVSALHRPTVMVCGSQTGLRLKRRDILLWSSIQ 240
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYW-ERMNLKYPVYFAL--GLTEKANNYYKMFI 360
+ +++GG VL+P R E+ +L+ W N + V L L + Y +
Sbjct: 241 KALKRGGSVLLPTSVGSRVLEVIHMLDDLWTNNQNSQQGVTLVLLTHLGARLLEYASSML 300
Query: 361 TWTNQKIRKTFVQRNMFDFK--------HIKPFDKSYIDNPGAMVVFATPGMLHAGLSLN 516
W + I + ++N F+ + FDK G VV + L +G S
Sbjct: 301 EWMSPSIIAEWEKKNESPFQTRNFKIVHSMDQFDKVVKGGNGQFVVVSVGEDLESGFSRL 360
Query: 517 IFKKWAPHEQNMVI 558
+F + A E+N V+
Sbjct: 361 LFNRLASDERNSVL 374
>UniRef50_Q6BSP2 Cluster: Similar to CA3384|IPF8362 Candida albicans
IPF8362; n=1; Debaryomyces hansenii|Rep: Similar to
CA3384|IPF8362 Candida albicans IPF8362 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 959
Score = 50.0 bits (114), Expect = 4e-05
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
RP +LIT + +T+ KR + FL V + GG VL+P GR EL L++ +
Sbjct: 203 RPTVLITNTDLGSTMSHKKRTEK--FLNLVDATLANGGAVLLPTSLSGRFLELLHLIDQH 260
Query: 277 WERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ----RNMFDFKHIKPFDKS 444
+ + PVYF K +Y + W + ++ K + + N K+ PFD S
Sbjct: 261 LQ--SAPIPVYFLSYSGTKVLSYASNLLEWMSSQLVKEWEEASSVNNNSSNKNNFPFDPS 318
Query: 445 YID---NPGAMVVFATPGMLH-AGLSL 513
+D +P +V + P ++ +G+ L
Sbjct: 319 KVDLLLDPSELVQLSGPKIVFCSGIDL 345
>UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase;
n=2; Sulfurovum sp. NBC37-1|Rep: RNA-metabolising
metallo-beta-lactamase - Sulfurovum sp. (strain NBC37-1)
Length = 467
Score = 49.6 bits (113), Expect = 5e-05
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCRP-DLLITESTYATTIRDSKRCRERDFLKKVHECVEK 204
+V++GD D + + C+ D L ESTY E +F + + +E
Sbjct: 185 IVFSGDIGN--DNDMVIPNLVPCKAADFLYVESTYGDRNHKGALESEEEFRSVITKTLEN 242
Query: 205 GGKVLIPVFALGRAQE-LCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKI 381
G V+IP FA+ R QE LCIL E + + + ++ + +A YK F
Sbjct: 243 WGNVIIPSFAIERTQELLCILKEMHDKGELPECKIFLDSPMATRATAVYKEFAEELLSTE 302
Query: 382 RKTFVQRN--MFDFKHIK-----PFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
+T +R+ +FDF + K+ D ++ A GM + G L+ FK +
Sbjct: 303 CQTIKKRDGTVFDFDGLNYTLTVDESKAINDVDERAIIIAGSGMCNGGRILHHFKNRLWN 362
Query: 541 EQNMVI 558
+N VI
Sbjct: 363 PKNAVI 368
>UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4;
Legionella pneumophila|Rep: Metallo-beta lactamase
family - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 453
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGA-AWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK 183
I+ S+V+TGD D + A A+I + D L+ ESTY + D+ + +
Sbjct: 170 IKTQKGSIVFTGDIGRPYDPVMKAPAFIQET--DYLVMESTYGDRLHDATDPLPQ-MAQV 226
Query: 184 VHECVEKGGKVLIPVFALGRAQEL 255
+++ V++GG V+IP FA+GRAQ L
Sbjct: 227 INQTVKRGGSVIIPAFAVGRAQSL 250
>UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 468
Score = 48.8 bits (111), Expect = 9e-05
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Frame = +1
Query: 109 LITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERM 288
L+TESTY + + ++ +KGGK++IP FAL RAQE+ L+ ++
Sbjct: 211 LLTESTYGDRLHAPIELTIEALAEVINRTGKKGGKIVIPSFALERAQEIIYALKKLHDQK 270
Query: 289 NL-KYPVYFALGLTEKANNYYKMF-ITWTNQKIRKTFVQRNMFDF---KHIKPFD--KSY 447
+ PVY LT K + +K+ + + + + F+F K+I + K
Sbjct: 271 RIPSIPVYIDSPLTVKLTDVFKLHPECYDTEAFALLHSENSPFEFPGLKYISSVEDSKKI 330
Query: 448 IDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
+ +V + GM G L+ +N VI+
Sbjct: 331 SSSTEPSIVISASGMCEGGRILHHLAATIGDARNTVII 368
>UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Metallo-beta-lactamase superfamily protein - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 451
Score = 48.4 bits (110), Expect = 1e-04
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHE-CVEKGGKVLIPVFALGRAQELCILLETYW 279
D ++ E+TY + E + V E CV+K G+++IP F+LGR Q L L
Sbjct: 192 DYVLCETTYGNRVHKETEPAEEIVKRIVTEACVDKPGRLIIPAFSLGRTQSLLYTLNKLA 251
Query: 280 ERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ-RNMFDFK---HIKPFDKS 444
+ L V+ L + N Y + + N + Q ++FDF+ H+K F +S
Sbjct: 252 LKNELPPIKVFTDSALAAEGTNIYSKYSSLMNGEALAIKAQDESLFDFENLDHVKTFKES 311
Query: 445 -YIDN-PGAMVVFATPGMLHAG 504
I N ++ ++ GM+ G
Sbjct: 312 KNISNYLKPCIILSSSGMITGG 333
>UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Betaproteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Polynucleobacter sp.
QLW-P1DMWA-1
Length = 471
Score = 48.4 bits (110), Expect = 1e-04
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D+++ ESTY + S E + ++ + + G ++IP FA+GR QE+ LL
Sbjct: 213 DVVLIESTYGDRLHRSLSETEEELVEVISSTMAAKGNIVIPAFAVGRTQEILFLLIDLVR 272
Query: 283 RMNLKY-PVYFALGLTEKANNYYKMFITWTNQKIRKTFV----QRNMFDFKHIKPFDKSY 447
+ L + ++ + A + F + + + + TF D + I ++S
Sbjct: 273 KEKLPHLAIWVDSPMATAATHLTHHFFSQLDAQSQATFQWFQNHPEALDLRFIADVEESK 332
Query: 448 IDN--PGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
N G ++ + GM AG ++ P QN VI+
Sbjct: 333 ALNKIKGGAIIISASGMCDAGRIVHHLANNLPRSQNAVII 372
>UniRef50_Q6L0H4 Cluster: MRNA 3'-end processing factor; n=4;
Thermoplasmatales|Rep: MRNA 3'-end processing factor -
Picrophilus torridus
Length = 405
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK 183
W S S + TGD T D +L + D+LI ESTYA + + +
Sbjct: 141 WRFEDSFSFMITGDL-YTRDTNL-LKGARPVKTDVLIMESTYAGRDHEDRDEVIKRLKDS 198
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILL 267
+ E ++ GGKV++P FA+GR QE+ ++L
Sbjct: 199 IKETIDNGGKVILPTFAIGRTQEMIMIL 226
>UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Beta-lactamase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 813
Score = 48.0 bits (109), Expect = 1e-04
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRP-DLLITESTYATTIRDSKRCRERDFLKK 183
+R S V +TGD M + A + + DLLI E+T A + ++
Sbjct: 538 LRSSSAMVFHTGDICMEDHFSIPPARLPEVSGIDLLIMEATLADQRPQPFNESIKKMVRV 597
Query: 184 VHEC-VEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALG---------LTEK 333
++E +E+GG VLIP +ALG+AQE+ + L+ + + L+ V+ + L +
Sbjct: 598 INETTLERGGTVLIPTYALGQAQEIILGLKYFGKEHGLERDVFIYVDGSVVTTSERLYAE 657
Query: 334 ANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVFATPGMLHAGLSL 513
Y K ++ T+ R+ F N+ + + + NP A++ A+P + G S
Sbjct: 658 QLRYMKPYLQHTDP--RELFFSENIRAVANDDRARERILANPCAII--ASPVTMEGGASA 713
Query: 514 NIFKKWAPHEQNMVIM 561
++ E+N VI+
Sbjct: 714 FYRRRLEGSERNAVIL 729
>UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Nitratiruptor sp. (strain
SB155-2)
Length = 462
Score = 48.0 bits (109), Expect = 1e-04
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 7/186 (3%)
Frame = +1
Query: 22 QSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVE 201
+ V+++GD HL D L ESTY + + ++F + + ++
Sbjct: 183 KKVIFSGDLG-NRQVHLNPPPTDPTSARHLFIESTYGDRLHKNYEESVKEFKEAIMMTLK 241
Query: 202 KGGKVLIPVFALGRAQE-LCILLETYWER-MNLKYPVYFALGLTEKANNYYKMFITWTNQ 375
+GG VLIP FA+ R Q+ LCIL E R + VY + K + Y+ + +
Sbjct: 242 RGGNVLIPSFAIERTQQILCILKEMSDHRELPPHTEVYLDSPMAIKTTHVYQKYRHLLSD 301
Query: 376 KIRKTFVQRNMFDFKHIK-----PFDKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPH 540
+ Q FDF H++ K ++ A GM + G L+ FK
Sbjct: 302 YCKH---QPAPFDFPHLRFATSTNASKRINAKKSGNIIIAGSGMCNGGRILHHFKHRIWD 358
Query: 541 EQNMVI 558
+N VI
Sbjct: 359 PKNSVI 364
>UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Microscilla marina ATCC
23134|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Microscilla marina ATCC
23134
Length = 476
Score = 48.0 bits (109), Expect = 1e-04
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHE-CVEKGGKVLIPVFALGRAQELCILLETYW 279
D LI ESTY S+ E L + CV+K G++LIP F++GR Q L L
Sbjct: 217 DYLICESTYGNRYHQSEGSPEEIVLDVIKRACVDKPGRLLIPAFSVGRTQALLFTLNKLC 276
Query: 280 ERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTF-VQRNMFDFKHI 426
L +Y L + + Y+ ++ N++ ++ +++FDF+++
Sbjct: 277 SEGKLPPIKIYTDSPLAKASTQVYQKHLSLLNKEAQEFHKSNQSLFDFENL 327
>UniRef50_A0Q181 Cluster: Metallo-beta-lactamase family protein,
putative; n=5; Clostridium|Rep: Metallo-beta-lactamase
family protein, putative - Clostridium novyi (strain NT)
Length = 512
Score = 48.0 bits (109), Expect = 1e-04
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHL-GAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEK 204
+VYTGD T + ++I D +I E+TY + ++ + + + E+
Sbjct: 182 IVYTGDLGNTNKPIIRDPSYITYA--DYIIMETTYGDRVHGDMDWSFKELVNIITDTFER 239
Query: 205 GGKVLIPVFALGRAQELCILLETYWERMNLK-YPVYFALGLTEKANNYYKMFITWTNQKI 381
GG V+IP F++GR QE+ L Y + LK ++ L + Y+ + + ++
Sbjct: 240 GGNVIIPSFSVGRTQEVLYALSKYVKNNILKDVTIFVDSPLAANTSKIYEECSDYHDSEM 299
Query: 382 RKTFVQR--NMFDFKHIK----PFDKSYIDN-PGAMVVFATPGMLHAG 504
K+ V+ N +FK +K P + I+ G ++ + GM AG
Sbjct: 300 -KSLVRTGLNPLNFKGVKYTNTPQESIQINKFKGNAIIISASGMCEAG 346
>UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 979
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
RPDLLITE + ++ R+ + VH ++ G +L PV A R EL +LL+ +
Sbjct: 295 RPDLLITEIERGLVVNTRRKDRDAALIDLVHTTIQAGNSLLFPVDASARLLELMVLLDQH 354
Query: 277 W 279
W
Sbjct: 355 W 355
>UniRef50_A4XTF4 Cluster: Beta-lactamase domain protein; n=12;
Gammaproteobacteria|Rep: Beta-lactamase domain protein -
Pseudomonas mendocina ymp
Length = 488
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKG 207
+V++GD P + A + D+L+ ESTY + + + R K + +
Sbjct: 180 IVFSGDLG-APHAPILPATKAPYKADILVIESTYGDRLHEDRHSRRARLEKVLEHALSNQ 238
Query: 208 GKVLIPVFALGRAQELCILLE 270
G VLIP F++GR QEL LE
Sbjct: 239 GTVLIPAFSIGRTQELLYELE 259
>UniRef50_A3GHD1 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 934
Score = 47.6 bits (108), Expect = 2e-04
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Frame = +1
Query: 1 FW-IRVGSQSVVYTGDYNMTPDRHL-GAAWIDKC---------RPDLLITESTYATTIRD 147
FW I S V+Y +N + D L GA+++ RP IT + + +
Sbjct: 160 FWLITKRSDRVIYAPAWNHSKDSFLNGASFLSSSSGNPLSQLLRPTAFITSTDMGSVMSH 219
Query: 148 SKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLT 327
KR + FL+ V + GG +IP GR EL L++ + + PVYF
Sbjct: 220 KKRTEK--FLQLVDATLANGGAAVIPTSLSGRFLELFHLIDEHLQ--GAPIPVYFLSYSG 275
Query: 328 EKANNYYKMFITWTNQKIRKTFVQ-RNMFDFKHIKPFDKSYID 453
K +Y I W + ++ + + + ++K++ PFD S +D
Sbjct: 276 TKVLSYASNLIDWMSSSVQSQWEEAESSTNYKNL-PFDPSKVD 317
>UniRef50_Q8YS71 Cluster: All3220 protein; n=10; Cyanobacteria|Rep:
All3220 protein - Anabaena sp. (strain PCC 7120)
Length = 555
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKCRP---DLLITESTYATTIRDSKRCRERDFLKKVH 189
S ++YTGD+ ++ R + +++ R ++LI E TY T+ +R +E ++++
Sbjct: 169 SYKLLYTGDFFLSNSRLVEGLRLEELRGIDLNVLIIEGTYGTSRHPHRRNQENQLAERIN 228
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETY 276
+ V++P ALG QEL +LL ++
Sbjct: 229 RAISDRYSVVLPTPALGLGQELLMLLRSH 257
>UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Deltaproteobacteria|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - delta proteobacterium MLMS-1
Length = 469
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D+LI ESTY E++ ++ V+E + G +LIP FA+GR Q+L L +
Sbjct: 209 DVLIMESTYGDRQHPPYPDSEKELVRIVNETHTRRGCLLIPAFAVGRTQQLIYALHKLYL 268
Query: 283 RMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRN 405
+ + P+Y L +A + +++ +++IR +Q N
Sbjct: 269 AGEIPELPIYVDSPLATRATDIFRLHPEAYDREIRDFILQGN 310
>UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2;
Thermoanaerobacter ethanolicus|Rep: Beta-lactamase-like
- Thermoanaerobacter ethanolicus X514
Length = 616
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTP-DRHLGAAWIDKCRPDLLITESTYATTIR---DSKRCRERD 171
++ + + YTGD+ + + + G ++ + D+LITE+TY +K +++
Sbjct: 354 YLEIDGIKIFYTGDFTLKDVESNKGLRFLPDLKVDILITEATYGYGNNFGVQNKYLQDKL 413
Query: 172 FLKKVHECVEKGGKVLIPVFALGRAQELCI 261
LK + + ++ ++L+PV+A+G+ Q+L +
Sbjct: 414 ILKSIEKLLKDEERILLPVYAIGKGQDLLL 443
>UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein;
n=1; Algoriphagus sp. PR1|Rep: Metallo-beta-lactamase
family protein - Algoriphagus sp. PR1
Length = 482
Score = 46.8 bits (106), Expect = 3e-04
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
+ D+L ESTY + + E + + + + ++ G V+IP FALGR Q + L
Sbjct: 221 KADILWIESTYGDRVSPPVKAEE-ELGRAIRDTFDRDGLVIIPAFALGRTQLVMYYLYQL 279
Query: 277 WERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ---RNMFDFKHIKPFDK- 441
E+ + K P++ + A N K+++ + N ++ ++FD + F K
Sbjct: 280 MEKGKIPKVPIFLD---SPMAINATKLYLDYKNDHQLTACLEEEDHHLFDHPQLHYFRKQ 336
Query: 442 ----SYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
S + G ++ + GM G L+ P+E+N VI
Sbjct: 337 EESRSLNEYRGNAIIISASGMATGGRVLHHLFHHLPNEKNSVI 379
>UniRef50_Q0UZX3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 934
Score = 46.8 bits (106), Expect = 3e-04
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHL-GAAWIDKC-----------RPDLLITESTYATTIRDS 150
I+ G +SVVY D+N + L GAAW+ RP +I S + ++ +
Sbjct: 204 IQHGMESVVYAVDWNQAREHVLSGAAWLGTGTGGSEVLEQLRRPTAMICSSKNSGLVKVA 263
Query: 151 KRCRERD--FLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
K +RD L + + V KGG VLIP + R E+ LLE W
Sbjct: 264 KAPSKRDEELLSMIRDTVAKGGSVLIPCDSSARILEIAYLLEKSW 308
>UniRef50_A6VTF2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=14; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Marinomonas sp. MWYL1
Length = 477
Score = 46.4 bits (105), Expect = 5e-04
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +1
Query: 28 VVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKG 207
V+++GD P L A R D L+ ESTY +++ R + + + +
Sbjct: 181 VLFSGDLG-APYSPLLPAPQSPYRADQLVLESTYGNRNHENRAIRRKHLQQSLEHALSDS 239
Query: 208 GKVLIPVFALGRAQELCILLE 270
G VLIP F++GR QEL LE
Sbjct: 240 GTVLIPAFSIGRTQELLYELE 260
>UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=4;
Clostridia|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing -
Thermoanaerobacter tengcongensis
Length = 541
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D ++ ESTY I + R + ++ + +++GG V+IP FA+GR QE IL E + E
Sbjct: 206 DYVLCESTYGNRIHEEVSDRAKRLMEIITRTIKRGGNVIIPSFAVGRTQE--ILYELHRE 263
Query: 283 RMNLKYPVYF 312
R K + F
Sbjct: 264 RDLYKDEIEF 273
>UniRef50_Q5CXL4 Cluster: Inactive CPSFs Cft2p
metallobeta-lactamase; n=2; Cryptosporidium|Rep:
Inactive CPSFs Cft2p metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 1196
Score = 46.0 bits (104), Expect = 6e-04
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Frame = +1
Query: 145 DSKRCRER-----DFLKKVHECVEKG--GKVLIPVFALGRAQELCILLETYWERMNLKYP 303
D K+C R F+ + +C++K G +LIP+ E+ L+ W + + YP
Sbjct: 257 DFKKCNNRLISIKKFVNTILDCIKKNKTGTILIPMQLDSLLLEILCYLDAIWNKGKILYP 316
Query: 304 VYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFD-KSYIDNPGA----- 465
++ L + K I W + +IR F F +K ++ + N +
Sbjct: 317 IFVTSPLIKSFLLSVKTLIEWMSLEIRSEFCDSRFNPFHDLKNIILETNLKNIRSENLSK 376
Query: 466 --MVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
V+FA P + G S +F + A +E N ++
Sbjct: 377 VPKVIFAFPESMDYGYSRELFTELATNENNTIM 409
>UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Beta-lactamase domain
protein - Solibacter usitatus (strain Ellin6076)
Length = 469
Score = 45.6 bits (103), Expect = 8e-04
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILL-ETYW 279
D LI ESTY + V ++GG++++P FA+GR Q+L +LL + +
Sbjct: 211 DYLIMESTYGGRLHKQSGHVINKLADVVTRTAKRGGRIIVPAFAVGRTQQLVLLLHQLFN 270
Query: 280 ERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ-RNMFDFKHIKPF-----DK 441
E+ P++ L ++ ++ R+ + F F+ ++ K
Sbjct: 271 EKRIPNIPIFVDSPLALNVTAVHRAHPECFDEDTRRYLTDGEDPFGFRRLQYIREASESK 330
Query: 442 SYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
D G VV ++ GM AG L+ + +N +++
Sbjct: 331 KLNDLHGPFVVVSSSGMCEAGRILHHLRNNIEDPRNTILI 370
>UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity
factor-related protein; n=1; Pirellula sp.|Rep: Cleavage
and polyadenylation specifity factor-related protein -
Rhodopirellula baltica
Length = 488
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
R DLL+ ESTY + K R+ + + ++ G ++P F+LGR Q L L
Sbjct: 229 RADLLVLESTYGDRLHPPKADRQAELEAVIRRTLDDSGVTIVPAFSLGRTQALLYELNAI 288
Query: 277 WERM 288
+ER+
Sbjct: 289 FERI 292
>UniRef50_A3ZTP5 Cluster: Metallo-beta-lactamase family protein;
n=1; Blastopirellula marina DSM 3645|Rep:
Metallo-beta-lactamase family protein - Blastopirellula
marina DSM 3645
Length = 462
Score = 45.2 bits (102), Expect = 0.001
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFL-KKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
D LI ESTY RD + D L ++V++ ++GG +L FA+GR+Q+L LL+
Sbjct: 206 DYLICESTYGD--RDHPQEDILDILAERVNKAFQRGGVMLFAAFAVGRSQQLIYLLQVLM 263
Query: 280 ERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFD---FKHIKPFDKSY 447
+ ++P++ + A ++ F + + ++ D + ++ ++S
Sbjct: 264 HAGRIPRFPIFLDSPMAVDATKIFRTFSQDHDLSEGQLSPPSSVLDGPNVELVRDHERSK 323
Query: 448 IDN--PGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
N G V+ ++ GM+ G L K+ P +N V++
Sbjct: 324 QLNRVTGPAVIISSSGMMTGGRILFHLKRRLPDPKNTVLL 363
>UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: WbfZ
protein - Vibrio cholerae
Length = 446
Score = 44.8 bits (101), Expect = 0.001
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Frame = +1
Query: 10 RVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVH 189
R + VV++GD + L + R D L E+TY + + R + +
Sbjct: 165 RPNGEVVVFSGDLGPSHTPLLPDPQSPE-RADYLFIETTYGDKQHEDVQSRGQRLRAMIE 223
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLE--TYWERMNLKYPVYFALGLTEKANNYYKMF-I 360
+ GG +LIP F++GR QEL +E + ++++ P+ + ++ Y+ F
Sbjct: 224 RSLTDGGAILIPAFSVGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFKQ 283
Query: 361 TWTNQKIRKTFVQRNMFDFKHIKPFDK--------SYIDNPG-AMVVFATPGMLHAGLSL 513
W + + + R+ F+ + + + + G A +V A GM G +
Sbjct: 284 LWGREAKARLQMHRHPLAFEQCITVEDHRTHERLVNRLASTGEAAIVVAASGMCQGGRIM 343
Query: 514 NIFKKWAPHEQNMVIM 561
+ K P ++ +I+
Sbjct: 344 DYLKALLPDKRTDLIL 359
>UniRef50_A5DXK9 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1067
Score = 44.8 bits (101), Expect = 0.001
Identities = 33/127 (25%), Positives = 54/127 (42%)
Frame = +1
Query: 73 GAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQE 252
G + RP +T + + + KRC + FL+ V + GG +IP GR E
Sbjct: 195 GMPHVGLLRPTAFVTGADLGSNLSHKKRCEK--FLQLVDATLNNGGAAIIPTSISGRFLE 252
Query: 253 LCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKP 432
L L++ + + PVYF K +Y + W + K + N+ D + P
Sbjct: 253 LFHLVDQHLK--GAPIPVYFFSYSGTKILSYASGLMDWMSSSFNKAWNIENLRDDQ--LP 308
Query: 433 FDKSYID 453
F+ S +D
Sbjct: 309 FNPSKVD 315
>UniRef50_Q1GQ91 Cluster: Beta-lactamase-like protein; n=43;
Bacteria|Rep: Beta-lactamase-like protein - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 473
Score = 44.4 bits (100), Expect = 0.002
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D LI ESTY ++ + CV +GG V+IP FA+GRAQ + L
Sbjct: 222 DYLIVESTYGNRSHEALDAVAA-LGDAIERCVRRGGTVVIPAFAVGRAQSILYHLSRLRA 280
Query: 283 RMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFD--KSYID 453
+ PVY + A+ + + ++ + ++++ + K+
Sbjct: 281 AGRISNVPVYLDSPMAIDASGIFCRHA--GDHRLTEAECDAACKVARYVRDVEESKALTM 338
Query: 454 NPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
+P V+ + GM G L+ K++AP +N+++
Sbjct: 339 SPVPKVIISASGMATGGRVLHHLKRYAPDGRNLIL 373
>UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Pedobacter sp. BAL39|Rep:
Metallo-beta-lactamase superfamily protein - Pedobacter
sp. BAL39
Length = 460
Score = 44.4 bits (100), Expect = 0.002
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHE-CVEKGGKVLIPVFALGRAQELCILLETYW 279
D L+ ESTY E+ ++ ++E CV+ G+++IP F++GR Q L L +
Sbjct: 203 DFLVCESTYGGKFHSKLETLEQKLVQTINEACVKFPGRLIIPAFSIGRTQALVYALNQIF 262
Query: 280 ERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQR-NMFDFKHI-----KPFD 438
+ L ++ L E A + Y+ N+ + + + + FDF + K
Sbjct: 263 SKGLLPPVKIFVDSPLAEFATDVYRRHHDLLNEDAKAFYRSKGDEFDFDELSYVQDKKES 322
Query: 439 KSYIDNPGAMVVFATPGMLHAG 504
S + ++ ++ GML G
Sbjct: 323 MSVSNYHEPCIIISSAGMLEGG 344
>UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12;
Rhizobiales|Rep: Beta-lactamase-like - Rhodopseudomonas
palustris
Length = 542
Score = 44.0 bits (99), Expect = 0.002
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Frame = +1
Query: 103 DLLITESTYATTIRD--SKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
D +I ESTY +R+ S + R +V+ G ++IP FA+ R QEL + L
Sbjct: 211 DYVICESTYGDRVREPTSPKLRHERLAAEVNAAAAARGALVIPAFAVERTQELIVDLIDL 270
Query: 277 WERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIR-KTFVQRNMFDFKHIKPFDKSYI 450
E+ + P++ L +A ++ ++ + + + F K+
Sbjct: 271 MEKGTIPSAPIFLDSPLAIRATEVFRRHAADLDEDVDVERLLASPHLRFTETVEESKAIA 330
Query: 451 DNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
G ++ A GM AG + K+W V++
Sbjct: 331 KLNGFHIIIAASGMCDAGRIRHHLKRWLCRSTGTVLL 367
>UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1;
Opitutaceae bacterium TAV2|Rep: Beta-lactamase domain
protein - Opitutaceae bacterium TAV2
Length = 452
Score = 44.0 bits (99), Expect = 0.002
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
IR + + TGD R L A D +I E+T +T R + R + + V
Sbjct: 165 IRHKHRHIFITGDVLFDDQRTLKGAHFPAGHFDTVIMETTRGSTERAPGKERVHEVARLV 224
Query: 187 ---HECVEKGGKVLIPVFALGRAQE-LCILLETYWERMNLKYPVYFALGLTEKANNYY 348
++ +++GG LIP FALGR QE L IL + ++ P+ FA GL +Y+
Sbjct: 225 DCINDTIQRGGSFLIPAFALGRMQEILSILCDARKFGRLVECPI-FASGLGLDLADYF 281
>UniRef50_A4J2E1 Cluster: Beta-lactamase domain protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Beta-lactamase
domain protein - Desulfotomaculum reducens MI-1
Length = 525
Score = 43.6 bits (98), Expect = 0.003
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILL-ETYW 279
D +I ESTY + + + + + +GGK++IP FA GR Q++ + + +
Sbjct: 206 DYVIMESTYGNRVHQDSDNKLELLQRAIKDTYHRGGKLIIPAFAAGRTQDILYSINKLHV 265
Query: 280 ERMNLKYPVY----FALGLTEKANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPFDKSY 447
+R + P+Y A+ TE N +++ T + I + M + K ++S
Sbjct: 266 QRAIPEMPIYIDSPMAIRATEIFRNNSQLYDRETRELIAQGHNPLEMPNIKTSLTVEESR 325
Query: 448 IDN--PGAMVVFATPGMLHAG 504
N G ++ + GM AG
Sbjct: 326 ELNFFKGRAIIISASGMCDAG 346
>UniRef50_Q74C32 Cluster: Metallo-beta-lactamase family protein;
n=2; Desulfuromonadales|Rep: Metallo-beta-lactamase
family protein - Geobacter sulfurreducens
Length = 475
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLE 270
R D+L+ ESTY + + R + + +E G +L+P F++GR QEL +E
Sbjct: 205 RADILVLESTYGDRQHEGREQRRERLCRVIVRALENRGALLVPAFSIGRTQELLYEIE 262
>UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein;
n=2; Carboxydothermus hydrogenoformans|Rep:
Metallo-beta-lactamase family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 504
Score = 43.2 bits (97), Expect = 0.004
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECV-EKGGKVLIPVFALGRAQELCILLETYW 279
D+L+ ESTY +R S+ + LK + E V + G ++IP FA+ R Q+L +L
Sbjct: 206 DILVLESTYGDRVR-SEEGDLKTLLKSLIEKVYRRNGNLIIPAFAMERTQDLIYILNDLV 264
Query: 280 ERMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRN---MFDFKH--IKPFDK 441
E + VY L + +K + + N++ ++ + + F H + D
Sbjct: 265 ENKEVPPIDVYIDSPLAVEITKLFKKYPMFFNEEYKEKLNRGDDPLAFPGLHFSVSQEDS 324
Query: 442 SYIDNPGAMVVFATPGMLHAGLSLNIFKK--WAPHEQNMVI 558
++N ++ + GM AG + K W P +++
Sbjct: 325 VKLNNISRAIIISASGMADAGRIRHHLKHNLWRPESAVLLV 365
>UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Chlorobium|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - Chlorobium phaeobacteroides BS1
Length = 462
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D +I ESTY + + ++ + + +GG +L+P F++GR+QEL L Y +
Sbjct: 206 DAVILESTYGDRLHRERAETLKEIAEVIRLADREGGNILVPAFSIGRSQELLYLFAIYHK 265
Query: 283 RMNL-KYPVYFALGLTEKANNYY 348
L ++ ++ + +A+ Y
Sbjct: 266 EWGLDRWQIFLDSPMAIEASRIY 288
>UniRef50_Q1IJR0 Cluster: Beta-lactamase-like; n=1; Acidobacteria
bacterium Ellin345|Rep: Beta-lactamase-like -
Acidobacteria bacterium (strain Ellin345)
Length = 476
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKCRP------DLLITESTYATTIRDSKRCRERDFLK 180
S+ V+++GD D + + + P D+++ ESTY K + K
Sbjct: 186 SKLVLFSGDIGRVRDTEVAPGKVVRSGPYEGESADIVVMESTYGNR-EHPKNDPRPEMAK 244
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNL-KYPVY 309
+ + V +GG V++P FA+ R Q+L +++ E + K PV+
Sbjct: 245 LIRDTVGRGGSVVVPAFAVERTQKLVFMVKQMMENNEIPKVPVH 288
>UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificity
factor subunit, putative; n=1; Filobasidiella
neoformans|Rep: Cleavage and polyadenylation specificity
factor subunit, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 899
Score = 43.2 bits (97), Expect = 0.004
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHL-GAAWIDK---------CRPDLLITESTYATTIRDSKRCRER 168
S +V+Y N T +RHL G + RPDLLI E + + ++ RE
Sbjct: 192 SGTVLYAVGINHTSERHLDGMVGVQNGPTGYADGVLRPDLLIVEGGRSMVVNPKRKEREA 251
Query: 169 DFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
+ + +E VL+PV R EL ILL+ +W
Sbjct: 252 ALIDTITSTLESNHSVLLPVDPSPRLLELMILLDQHW 288
>UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein;
n=1; Treponema denticola|Rep: Metallo-beta-lactamase
family protein - Treponema denticola
Length = 470
Score = 42.7 bits (96), Expect = 0.006
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D ++ ESTY + + +K E V+ GK++IP FA+ R QE+ +
Sbjct: 210 DYIVIESTYGNRRHEETDNALKLLAEKTQEIVQNKGKMIIPAFAVERTQEIVYYFHLLVD 269
Query: 283 -RMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFV--QRNMFDFKHIK----PFDK 441
R+ P+Y + A + +++ + + + F+ +N F F +K +
Sbjct: 270 KRIIPDIPIYVDSPMAVNATSIFQVHPECYDAQTHEAFLIHHKNPFGFNSLKFITSVAES 329
Query: 442 SYIDN-PGAMVVFATPGMLHAG 504
++N G MV+ + GM G
Sbjct: 330 KELNNIDGPMVIISADGMCEFG 351
>UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 534
Score = 42.7 bits (96), Expect = 0.006
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +1
Query: 19 SQSVVYTGDY-NMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRER-DFLKKVHE 192
++ +V++GD N+ ++ D D ++ ESTY I +++ +F + + E
Sbjct: 176 TKKIVFSGDIGNVDQPIIKDPSYTDSA--DYIVVESTYGNRIHTAEKPDYLGEFTRIIKE 233
Query: 193 CVEKGGKVLIPVFALGRAQELCILLETYWER 285
++GG V+IP FA+GR QE+ + E+
Sbjct: 234 TFDRGGNVVIPSFAVGRTQEMLYFIREIKEK 264
>UniRef50_Q7S0J8 Cluster: Putative uncharacterized protein
NCU06869.1; n=4; Sordariomycetes|Rep: Putative
uncharacterized protein NCU06869.1 - Neurospora crassa
Length = 1002
Score = 42.3 bits (95), Expect = 0.007
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDR-HLGAAW-------------IDKCRPDLLITESTYATTIR 144
I+ G +S+VY D+N + GAAW I++ R + S+
Sbjct: 195 IQHGLESIVYAVDWNQARENVFAGAAWLGGNHGGAGGTQVIEQLRKPTALVCSSRTPDAA 254
Query: 145 DSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWER 285
+ R+ ++ + C+ +GG VLIPV + R EL LLE W +
Sbjct: 255 LPRAKRDEQLMESIKLCIARGGTVLIPVDSSARVLELSYLLEHAWRK 301
>UniRef50_A7F0N0 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 936
Score = 42.3 bits (95), Expect = 0.007
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHL-GAAW-----------IDKCR-PDLLITESTYATTIR- 144
I+ G +S+VY D+N + L GAAW I++ R P LI S +
Sbjct: 169 IQHGLESIVYAVDWNQARENVLAGAAWLGGAGAGGAEVIEQLRKPTALICSSKGGERVAL 228
Query: 145 -DSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLK-------Y 300
+ R+ L + +++GG VLIP + R EL LLE W N +
Sbjct: 229 PGGRAKRDELLLDMIKSSIKRGGIVLIPTDSGARMMELAYLLEHAWRTGNQEEESAFRSA 288
Query: 301 PVYFALGLTEKANNYYKMFITWTNQKIRKTF 393
Y A+ +E Y + W ++ I + F
Sbjct: 289 KPYLAVSTSEMTMRYTRSMFEWMDEAIIREF 319
>UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Haloquadratum walsbyi DSM 16790|Rep:
Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Haloquadratum walsbyi (strain DSM 16790)
Length = 538
Score = 42.3 bits (95), Expect = 0.007
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +1
Query: 4 WIRV--GSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRER-DF 174
WI + + +V++GD HLG D D L ESTY T++ R +
Sbjct: 159 WIAIEYNDRCIVFSGDLGGR-SAHLGDI-DDPPEADELFLESTYGETLQHRSFTDARTEL 216
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQEL 255
++ + + G VLIP FA+GRAQE+
Sbjct: 217 YQQAKQAIASGIPVLIPTFAVGRAQEI 243
>UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 441
Score = 42.3 bits (95), Expect = 0.007
Identities = 31/108 (28%), Positives = 49/108 (45%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKV 186
+ VG S++Y D N A D++I ++Y + D+ ER V
Sbjct: 155 VSVGGWSMLYAADINRGSSVFRDPAPAPSSY-DVVIANASYGDRVVDAG-VGERRVAALV 212
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTE 330
E V++GG LIPV A+GR QE ++L E + P++ + E
Sbjct: 213 LETVKRGGTALIPVTAVGRGQETLMILLRSREILGSGAPIFVEKSIAE 260
>UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative
RNA-processing exonuclease - Leptospirillum sp. Group II
UBA
Length = 479
Score = 41.9 bits (94), Expect = 0.010
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQEL 255
D +I E+TY + S + + L + E +GGKVLIP FAL RAQ+L
Sbjct: 208 DYVIMETTYGDRLHRSFEESKEELLGVLTETYGRGGKVLIPTFALERAQDL 258
>UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 712
Score = 41.9 bits (94), Expect = 0.010
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITEST--YATTIRDSKRCRERDFLKKV 186
G + VVY D +++ R+ + PD+LI Y D + +
Sbjct: 266 GFERVVYISDSSLSLSRYPTPFQLSPIDNPDVLILSKINHYPNNPPDQMLS---ELCSNI 322
Query: 187 HECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKY-PVYFALGLTEKANNYYKMFIT 363
+++GG VLIP ++ G +L L Y ++ L Y P+YF +++ +Y ++
Sbjct: 323 GSTLQQGGTVLIPSYSCGIILDLFEHLADYLNKVGLPYVPIYFVSSVSKAVLSYADIYSE 382
Query: 364 WTNQ-KIRKTFVQRNMF 411
W N+ K + F+ F
Sbjct: 383 WLNKSKQERAFMPETPF 399
>UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificity
factor-related protein; n=2; Deinococcus|Rep: Cleavage
and polyadenylation specificity factor-related protein -
Deinococcus radiodurans
Length = 499
Score = 41.1 bits (92), Expect = 0.017
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D ++ E+TYA +F + + + V + GK+LIP FA+ RAQ + L+ +
Sbjct: 217 DAVVIETTYANRTHRGWVETRAEFAQALRDSVRQNGKILIPSFAIERAQTILHTLKEMMD 276
Query: 283 RMNL-KYPVYFALGLTEKANNYY 348
+ + PV+ + +A N Y
Sbjct: 277 SGEVPRIPVFLDSPMAARATNEY 299
>UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2;
Alphaproteobacteria|Rep: Beta-lactamase domain protein -
Parvibaculum lavamentivorans DS-1
Length = 472
Score = 40.7 bits (91), Expect = 0.023
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 4/185 (2%)
Frame = +1
Query: 16 GSQSVVYTGDYNMTPDRHL-GAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 192
G + ++++GD D + + K D ++ ESTY D+ E+ + +
Sbjct: 194 GGKKILFSGDLGRYGDPVMVDPETVSKA--DYVVVESTYGNRSHDTADPVEQ-LGAVIEK 250
Query: 193 CVEKGGKVLIPVFALGRAQELCILLETYWERMNLK-YPVYFALGLTEKANNYYKMFITWT 369
V +GG V+IP FA+GRAQ L + + ++ PVY + A+ +
Sbjct: 251 TVARGGTVVIPAFAVGRAQSLLYYIWALKQAGRIRDVPVYLDSPMAINASELLCAHL--D 308
Query: 370 NQKIRKTFVQRNMFDFKHIKPFD--KSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHE 543
+ ++ ++ +++ + K N ++ + GM G L+ K +AP
Sbjct: 309 DHRLSPPLCKQVCDIATYVREVEDSKEITANAHPKIIISASGMATGGRVLHHMKSFAPDR 368
Query: 544 QNMVI 558
++ ++
Sbjct: 369 KHTIL 373
>UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 458
Score = 40.7 bits (91), Expect = 0.023
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +1
Query: 13 VGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHE 192
V + V++GD T D L K R D+L ESTY + + K V+E
Sbjct: 177 VQDKRFVFSGDIGRTNDLLLYPPAKPK-RADVLFMESTYGGRFHPEETEALPEIEKLVNE 235
Query: 193 CVEKGGKVLIPVFALGRAQELCIL 264
V +GG + IP F++ RAQ + ++
Sbjct: 236 TVSRGGSLFIPSFSVERAQLMMLI 259
>UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Rep:
Beta-lactamase-like - Desulfitobacterium hafniense
(strain DCB-2)
Length = 570
Score = 39.9 bits (89), Expect = 0.040
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +1
Query: 22 QSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVE 201
+++V++GD + + I C D++I E+TY +++ R + + + E +
Sbjct: 180 KTLVFSGDVGNSEQPFIENPRII-CGGDIVIVETTYGDRQHENRANRIQHLAEIIREAHQ 238
Query: 202 KGGKVLIPVFALGRAQEL 255
GG ++IP FA+ R Q+L
Sbjct: 239 AGGNLVIPAFAIERTQDL 256
>UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6;
Proteobacteria|Rep: Beta-lactamase-like - Mesorhizobium
sp. (strain BNC1)
Length = 452
Score = 39.9 bits (89), Expect = 0.040
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHL-GAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK 183
I + + + ++GD D L A + + D ++ ESTY I D E +
Sbjct: 171 IELAGRRIAFSGDLGRYGDPMLPDPAPVPEA--DYIVVESTYGNRIHDPADTTEV-LGEI 227
Query: 184 VHECVEKGGKVLIPVFALGRAQEL 255
V V++GG V+IP FA+GRAQ +
Sbjct: 228 VERTVKRGGTVVIPAFAVGRAQSV 251
>UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n=1;
unknown|Rep: UPI00015BD54C UniRef100 entry - unknown
Length = 451
Score = 39.1 bits (87), Expect = 0.069
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
+ +++ ESTY + S + ++ LK++ + G VLIP +AL R Q++ +L +
Sbjct: 199 KANVVYMESTYGDRLHKSFD-QSKEELKEIIKNTITHGNVLIPSYALERTQDILYVLREF 257
Query: 277 WERMNL-KYPVYF----ALGLTEK--ANNYYKMFITWTNQKIRKTFVQRNMFDFKHIKPF 435
+E +L K ++ A+G+T+ N Y T+ + F + + ++
Sbjct: 258 YEEGSLPKCKIFLDSPLAIGVTKVFLRNPEYFRKETYDIMQKEDPFSLPYLTMVRDVEE- 316
Query: 436 DKSYIDNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVI 558
K D ++ A GML G L+ + A EQN ++
Sbjct: 317 SKQINDIQEGAIIIAGSGMLSGGRILHHIRHHAYKEQNAIV 357
>UniRef50_A0LI39 Cluster: Beta-lactamase domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Beta-lactamase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 535
Score = 39.1 bits (87), Expect = 0.069
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D+L ESTY S ++ L+ + KV+IP FA+ R QEL ++ ++
Sbjct: 205 DMLFVESTYGNRNHKSFDESRKELLEAIQFSYRHREKVIIPAFAVERTQELLYVIGDFFR 264
Query: 283 RMNL-KYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQRN-MFDFKHI---KPFDKSY 447
+ + P+Y L A + ++ + + + R N FDF + + +S
Sbjct: 265 KKLIPSMPLYVDSPLAIAATDIFRRMKDFYDIETRAILDSGNDPFDFPELVLSRSSQESM 324
Query: 448 IDN--PGAMVVFATPGMLHAG 504
N G +V A GM AG
Sbjct: 325 AINQAAGPAIVIAGNGMCTAG 345
>UniRef50_A6R733 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 977
Score = 38.3 bits (85), Expect = 0.12
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHL-GAAW-----------IDKCRPDLLITESTYAT---TI 141
I+ G +S++Y D+N + + GAAW +++ R ST ++
Sbjct: 207 IQHGMESIIYAVDWNQARENVIAGAAWFGGSGASGTEVVEQLRKPTAFVCSTRGGDKFSL 266
Query: 142 RDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
++ R+ + + C KGG VLIP RA EL +LE W
Sbjct: 267 SGGRKKRDDLLMDMIRNCFSKGGTVLIPSDTSARALELAYVLEHAW 312
>UniRef50_Q8ZT63 Cluster: Putative uncharacterized protein PAE3418;
n=4; Pyrobaculum|Rep: Putative uncharacterized protein
PAE3418 - Pyrobaculum aerophilum
Length = 314
Score = 38.3 bits (85), Expect = 0.12
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 13 VGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYA--TTIRDSKRCRERDFLKKV 186
V ++ TGD+N AA + RPD+L+ E+TY + + ++ +FL V
Sbjct: 107 VDGVQILVTGDFNTAGSILTDAAEPIE-RPDVLVMEATYGDPSYVFPNRAEVYEEFLDVV 165
Query: 187 HECVEKGGKVLIPVFALGRAQELCILL 267
+ +GG V I + LG+AQE+ LL
Sbjct: 166 ERGISEGG-VAISAYPLGKAQEIAKLL 191
>UniRef50_Q1NUX3 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase precursor; n=1; delta
proteobacterium MLMS-1|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase precursor - delta proteobacterium
MLMS-1
Length = 530
Score = 37.9 bits (84), Expect = 0.16
Identities = 23/78 (29%), Positives = 44/78 (56%)
Frame = +1
Query: 22 QSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVE 201
Q+++++GD + L A + + D L+ E+T+ +D R R F ++ +E
Sbjct: 240 QTLLFSGDVGSDGGKLLPANPVFQQPLDTLVLEATHTGGQQDIAALR-RQFRHRLAGWLE 298
Query: 202 KGGKVLIPVFALGRAQEL 255
+G +V+IP FAL R+Q++
Sbjct: 299 EGKRVVIPAFALDRSQQV 316
>UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily
protein; n=11; Gammaproteobacteria|Rep:
Metallo-beta-lactamase superfamily protein - Pseudomonas
stutzeri (strain A1501)
Length = 505
Score = 37.5 bits (83), Expect = 0.21
Identities = 25/98 (25%), Positives = 43/98 (43%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECV 198
++ +V++GD + A + K D+++ ESTY S + + +
Sbjct: 217 TRRLVFSGDLGNVCSPLMPAPTVLK-EADVVLMESTYGDRDHRSHEDTIEELAGILQQAH 275
Query: 199 EKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYF 312
GG VL+P FA+GR Q+L L ++ L F
Sbjct: 276 RDGGNVLMPSFAVGRTQDLIYYLGRFYREGRLPQQAVF 313
>UniRef50_A0CJA4 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_2, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2654
Score = 37.1 bits (82), Expect = 0.28
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 190 ECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFITWT 369
E ++ KV+I V G+ QEL +L + +++N+ Y F E +NN I +
Sbjct: 1099 ELIQNFEKVIIVVS--GKTQELSLLTKQIMKKLNILYQTEFYTMYKETSNNIRTSLIWYH 1156
Query: 370 NQKIRKTFVQRNMFDFKHI--KPFDKSYIDNP 459
+ + +K + +N+F K FDK NP
Sbjct: 1157 SNEHQKAGLMQNLFQLGLYLKKDFDKGRSLNP 1188
>UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein;
n=2; Caulobacter|Rep: Metallo-beta-lactamase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 530
Score = 36.7 bits (81), Expect = 0.37
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 103 DLLITESTYATTIRDS--KRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCI 261
D LI ESTY R R++ ++V GG +LIP FA+ R+QEL I
Sbjct: 208 DHLILESTYGDRDRTGIDSAARKQQLAEEVRAAHAAGGPLLIPAFAVERSQELLI 262
>UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily
protein; n=9; Bacteria|Rep: Metallo-beta-lactamase
superfamily protein - Chlorobium tepidum
Length = 469
Score = 36.7 bits (81), Expect = 0.37
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYWE 282
D+++ ESTY + + ++ + + G +LIP F++GR+QEL L ++
Sbjct: 202 DVVLVESTYGDRLHRNFDSTVKEIGEIIETSRRDCGNILIPAFSIGRSQELLYLFGEHYR 261
Query: 283 RMNL-KYPVYFALGLTEKANNYY 348
L ++ V+ + +A+ Y
Sbjct: 262 EWELEQWQVFLDSPMAIEASRIY 284
>UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase;
n=1; Pseudoalteromonas atlantica T6c|Rep:
RNA-metabolising metallo-beta-lactamase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 467
Score = 35.9 bits (79), Expect = 0.65
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 97 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILL 267
+ D+++ ESTY S + + + +GG ++IP FA+GR QE+ L
Sbjct: 206 KADIVLMESTYGDRNHKSIDNTVSELKTILKDTENRGGNIMIPAFAVGRTQEILFYL 262
>UniRef50_A3ZSF3 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 279
Score = 35.9 bits (79), Expect = 0.65
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +1
Query: 25 SVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTI-RDSKRCRE-RDFLKKVHECV 198
S++YTGDY + G A + D+L+ E T+ R R FL +V +
Sbjct: 67 SMLYTGDYRLGESYTAGQAELPHA--DVLVMECTFGDPFYRLPPRAETIAKFLDQVDQAF 124
Query: 199 EKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVY 309
G ++ + LG+AQE+ +L + R+ + V+
Sbjct: 125 RIGATPIVHAYVLGKAQEVTKILTHHGIRVQQQQDVF 161
>UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase;
n=5; Bacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Moorella thermoacetica (strain
ATCC 39073)
Length = 536
Score = 35.5 bits (78), Expect = 0.85
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 4 WIR--VGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFL 177
W++ G + ++GD P + + D L+ ESTY R + + + + L
Sbjct: 173 WVKDMAGEIKITFSGDLG-NPGQPIVNDPTPIASTDYLVIESTYGNR-RHNIQGDKIELL 230
Query: 178 KKVH-ECVEKGGKVLIPVFALGRAQELCILLETYWERMNLK 297
K+V ++KGG ++IP FA+ R Q+L L ++ +K
Sbjct: 231 KEVILATMKKGGNLIIPAFAVERTQDLLYALNVILQQGAVK 271
>UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase;
n=16; Shewanella|Rep: RNA-metabolizing
metallo-beta-lactamase - Shewanella sp. (strain MR-4)
Length = 480
Score = 35.5 bits (78), Expect = 0.85
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECV-EKGGKVLIPVFALGRAQELCILLETY 276
DL++ ESTY S + + V E G +L+P F++GRAQEL L Y
Sbjct: 208 DLVLMESTYGDRFHRSWTDTLAELKAIFAKAVTESRGNILLPAFSVGRAQELLYLFHLY 266
>UniRef50_A2R7F5 Cluster: Contig An16c0120, complete genome.
precursor; n=1; Aspergillus niger|Rep: Contig An16c0120,
complete genome. precursor - Aspergillus niger
Length = 865
Score = 35.5 bits (78), Expect = 0.85
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHL-GAAW-----------IDKCR-PDLLI--TESTYATTI 141
I+ G +S+VY D+N + + GAAW I++ R P L+ T +
Sbjct: 184 IQHGMESIVYAVDWNQARESVVAGAAWFGGSGASGTEVIEQLRKPTALVCSTRGGERFAL 243
Query: 142 RDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
++ R+ L + + KGG VLIP R EL LE W
Sbjct: 244 PGGRKKRDDLLLDMIRSTIAKGGTVLIPTDTSARVLELAYALEHAW 289
>UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 539
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQEL 255
D +I ESTY + + + ++GG V+IP FA+GR QE+
Sbjct: 203 DYVIMESTYGDRSHGERPDYIAMLTEVIQHTFDRGGSVVIPSFAVGRTQEM 253
>UniRef50_Q2UQF0 Cluster: MRNA cleavage and polyadenylation factor
II complex; n=7; Eurotiomycetidae|Rep: MRNA cleavage and
polyadenylation factor II complex - Aspergillus oryzae
Length = 1014
Score = 34.7 bits (76), Expect = 1.5
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHL-GAAW-----------IDKCR-PDLLI--TESTYATTI 141
I+ G +S+VY D+N + + GAAW I++ R P L+ T +
Sbjct: 216 IQHGMESIVYAVDWNQARESVMAGAAWFGGSGASGTEVIEQLRKPTALVCSTRGGDKFAL 275
Query: 142 RDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
++ R+ L + + KGG VLIP R EL LE W
Sbjct: 276 PGGRKKRDDLLLDMIRSTLAKGGTVLIPTDTSARVLELAYALEHAW 321
>UniRef50_Q5FK37 Cluster: Putative helicase; n=1; Lactobacillus
acidophilus|Rep: Putative helicase - Lactobacillus
acidophilus
Length = 1238
Score = 34.3 bits (75), Expect = 2.0
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 217 LIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFIT-WTNQKIRKTF 393
++P+ A + L ++ + WE+ K + L AN Y+++ W Q+
Sbjct: 739 IVPLDASSKNHNLRLVKDA-WEKGKFKVLLTTFASLDRGANLQYRIYSKFWQKQRDNYAV 797
Query: 394 VQRNMFDF-KHIKPFDKSYIDNPGAMVVFATPGML 495
+ + K +K D YI+ P + +ATPG L
Sbjct: 798 LDDRFINKEKPVKDLDGIYIEKPTHIFAYATPGQL 832
>UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein;
n=3; Dehalococcoides|Rep: Metallo-beta-lactamase family
protein - Dehalococcoides sp. (strain CBDB1)
Length = 468
Score = 34.3 bits (75), Expect = 2.0
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILL 267
D ++ ESTY + +++ V+ GG V+IP FAL R Q+L L
Sbjct: 210 DYIVIESTYGDRTHEDINEALLKLADIINQTVKLGGNVVIPSFALERTQDLLFFL 264
>UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6;
Deltaproteobacteria|Rep: Metallo-beta-lactamase protein
- Syntrophus aciditrophicus (strain SB)
Length = 541
Score = 34.3 bits (75), Expect = 2.0
Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQEL--CILLETY 276
D L ESTY +++ + + + E K++IP FA+ R QE+ C+ L +
Sbjct: 212 DYLFLESTYGNRNHKNEQDSLNELAEAIAYSYECRQKMVIPAFAVERTQEMMYCLYLLSK 271
Query: 277 WERMNLKYPVYFALGLTEKANNYYKMFITWTNQKIRKTFVQ-RNMFDFKHIK---PFDKS 444
++ P+Y L +A ++ T+ + + + ++ N ++ ++S
Sbjct: 272 KGQLPKDMPIYLDSPLAIQATEIFRRHATFLDDETQALILKGENPLRLPQLRCTQTTEES 331
Query: 445 YIDN--PGAMVVFATPGMLHAG 504
N G ++ + GM +AG
Sbjct: 332 IAINQTEGPAIIISASGMANAG 353
>UniRef50_A7R3F1 Cluster: Chromosome undetermined scaffold_517,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_517, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 439
Score = 34.3 bits (75), Expect = 2.0
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 85 IDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVF 231
I+K R +++ TYA DS+ C D L K+ EC K G++++P+F
Sbjct: 217 IEKSRSSIVVFSKTYA----DSRWCL--DELAKIMECSRKYGQIVLPIF 259
>UniRef50_A5BGD5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 665
Score = 34.3 bits (75), Expect = 2.0
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 181 KVHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKMFI 360
++ + V+ GG VLIP+ LG +L L+ E +LK P++ + E+ + +
Sbjct: 323 QLSDSVKAGGSVLIPIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIP 382
Query: 361 TW 366
W
Sbjct: 383 EW 384
>UniRef50_Q22R56 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2395
Score = 34.3 bits (75), Expect = 2.0
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 310 FALGLTEKANNYYKMFITWTNQKIRKTFVQR--NMFDFKHIKPFDKSYIDNPGAMVVFAT 483
FA KAN +Y++ IT+ NQ I +MF I Y NP ++
Sbjct: 123 FAFNANLKANVFYRIEITFVNQIINNLVFNDPISMFTMSQIGSNSIIYDSNPSLFYLYIA 182
Query: 484 PGMLHAGLSLNIFKKWAPHEQ 546
P + + L +NI P E+
Sbjct: 183 PNIPNETLIVNIQLNSKPQEE 203
>UniRef50_A1RXU5 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 317
Score = 34.3 bits (75), Expect = 2.0
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT--IRDSKRCRERDF 174
F I + + +V+TGD+N+ ++ L R D++I + TY + + + R
Sbjct: 103 FLIELEGKRIVFTGDFNL--EKRLVLKPASVVRADVVIIDGTYGSPEYVFPPRTELYRGL 160
Query: 175 LKKVHECVEKGGKVLIPVFALGRAQELCILL 267
++ V +E+G VL+ +G AQEL L+
Sbjct: 161 VEFVKSRMEEGTPVLLKGRRVGVAQELTALM 191
>UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep:
Beta-lactamase-like protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 535
Score = 33.5 bits (73), Expect = 3.4
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 103 DLLITESTYATTIRDSKRCRERDFL--KKVHECVEKGGKVLIPVFALGRAQELCI 261
D +I ESTY R+ ER L ++ +GG +++P FAL R QEL +
Sbjct: 204 DHVICESTYGDRKREKVTVEERRKLLEAEILAARARGGNLVVPSFALERTQELLL 258
>UniRef50_A6EGT4 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 313
Score = 33.5 bits (73), Expect = 3.4
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 31 VYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGG 210
+Y+GDY + PD I+ + D+ ITE+T+A E + LK
Sbjct: 111 LYSGDYKLQPDATCEP--IEFVQADVFITETTFADPATQHP-VAETEILK----LNSTQS 163
Query: 211 KVLIPVFALGRAQELCILLETY 276
+++ +ALG++Q L L+ Y
Sbjct: 164 NIMLGAYALGKSQRLIQLINAY 185
>UniRef50_A7CVE9 Cluster: Type II site-specific deoxyribonuclease;
n=1; Opitutaceae bacterium TAV2|Rep: Type II
site-specific deoxyribonuclease - Opitutaceae bacterium
TAV2
Length = 284
Score = 33.1 bits (72), Expect = 4.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 373 QKIRKTFVQRNMFDFKHIKPFDKSYIDNPGAMVVF 477
+KI K FV+ KH++P + I NPGA+ F
Sbjct: 74 EKIVKQFVEETFLHLKHLRPGSWNVITNPGAITQF 108
>UniRef50_A7QLV6 Cluster: Chromosome chr18 scaffold_122, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_122, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1562
Score = 33.1 bits (72), Expect = 4.6
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 67 HLGAAWIDKCRPDLL--ITESTYATTIRDSKRCRER---DFLKKVHECVEKGGKVLIPVF 231
HL AA +K LL I ES ++ I D L K+ ECVE+GG +PVF
Sbjct: 795 HLHAALCEKISAGLLQAIEESRFSIIIFSENYASSSWCLDELTKILECVEEGGHTALPVF 854
>UniRef50_Q6AMI2 Cluster: Related to transposase; n=4;
Deltaproteobacteria|Rep: Related to transposase -
Desulfotalea psychrophila
Length = 268
Score = 32.3 bits (70), Expect = 8.0
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 85 IDKCRPDLLITESTYATTIRD--SKRCRERDFLK-KVHEC-VEKGGKVLIPV 228
+ K LLI+ES Y +++ SKRCRE + LK ++ E VE GG V P+
Sbjct: 16 VKKMCQTLLISESGYYRWLQEPISKRCRENNILKNRIQELYVEHGGMVGSPM 67
>UniRef50_Q30ZE5 Cluster: Biopolymer transport protein (ExbB)-like;
n=1; Desulfovibrio desulfuricans G20|Rep: Biopolymer
transport protein (ExbB)-like - Desulfovibrio
desulfuricans (strain G20)
Length = 208
Score = 32.3 bits (70), Expect = 8.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 169 DFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
D+L++V GG ++P+ A A L ILL++YW
Sbjct: 5 DYLEQVLVYFNAGGPTMVPIMAFSFAIWLIILLKSYW 41
>UniRef50_Q0DK86 Cluster: Os05g0182900 protein; n=2; Oryza
sativa|Rep: Os05g0182900 protein - Oryza sativa subsp.
japonica (Rice)
Length = 346
Score = 32.3 bits (70), Expect = 8.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 192 LVNFFKEISFPTPFRISYSCCISRFSYKQVRSAFINPGCSQVSIWCHIVVS 40
L N KEI R+S C+ + ++ RS F+N G + W H +S
Sbjct: 289 LWNMLKEIPLTPADRLSVGICLCKPEFEVHRSFFMNMGREYLEAWAHKFLS 339
>UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 700
Score = 32.3 bits (70), Expect = 8.0
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +1
Query: 100 PDLLITESTYATTIRDSKRCRERDFLKKVHECVEKGGKVLIPVFALGRAQELCILLETYW 279
P L I ++ + RD K E +F +++ + G ++ P + + E+ L+ W
Sbjct: 193 PTLWILDARGPESHRDGK---EDEFWRQIFGKLNGGKTIIFPTDGVSGSLEVISRLKEQW 249
Query: 280 ERMNLKYPVYF 312
+++N K+ +YF
Sbjct: 250 KKVNWKWKIYF 260
>UniRef50_Q8U376 Cluster: Putative uncharacterized protein PF0596;
n=3; Thermococcaceae|Rep: Putative uncharacterized
protein PF0596 - Pyrococcus furiosus
Length = 314
Score = 32.3 bits (70), Expect = 8.0
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 4 WIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCR--ERDFL 177
W+ G+ + YTGD + R A I K D LI E+T+ + R E++ +
Sbjct: 121 WLDEGT--LYYTGDIKLERLRTAERAKIPKA--DFLIIEATFGVPMYSFPEPRKVEKEII 176
Query: 178 KKVHECVEKGGKVLIPVFALGRAQELCILLETY 276
V + +++G +I G+AQE+ +L +
Sbjct: 177 WYVEDQLDRGKIPIIQANPYGKAQEIIAILNAH 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,764,097
Number of Sequences: 1657284
Number of extensions: 10486821
Number of successful extensions: 24124
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 23446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24030
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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