Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H07
(562 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22166| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_46615| Best HMM Match : RMMBL (HMM E-Value=2.5e-15) 38 2e-07
SB_56244| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_59520| Best HMM Match : RMMBL (HMM E-Value=6.4e-18) 39 0.003
SB_59796| Best HMM Match : RMMBL (HMM E-Value=0.18) 35 0.052
SB_58448| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_26200| Best HMM Match : v110 (HMM E-Value=8.1) 29 2.0
SB_48800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_1634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
>SB_22166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 7 IRVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTIRDSKRCRERDFLKK 183
++ G + ++Y DYN +RHL A ++ RP LLIT+S A I+ +R R+ + +
Sbjct: 163 VKDGEEDIIYAVDYNHKKERHLNGAVLETLSRPSLLITDSFNALNIQTRRRERDTQLMGE 222
Query: 184 VHECVEKGGKVLIPVFALGRAQELCILLETYWERMNLKYPVY 309
+ + + + G V+I + GR EL LL+ W ++ Y
Sbjct: 223 ILKTMRRHGNVMIAIDTAGRVLELSQLLDQLWRNLDSGLSAY 264
>SB_46615| Best HMM Match : RMMBL (HMM E-Value=2.5e-15)
Length = 304
Score = 37.5 bits (83), Expect(2) = 2e-07
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 427 KPFDKSYIDNPGAMVVFATPGMLHAG 504
KPFD+SYIDNPG MVV PG AG
Sbjct: 19 KPFDRSYIDNPGPMVVI--PGYCVAG 42
Score = 34.7 bits (76), Expect(2) = 2e-07
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 280 ERMNLKYPVYFALGLTEK 333
ERMNLK P+YF+ GLTEK
Sbjct: 2 ERMNLKAPIYFSTGLTEK 19
>SB_56244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/95 (28%), Positives = 46/95 (48%)
Frame = +1
Query: 19 SQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECV 198
++ +V++GD L A + R D+L+ ESTY + +++ R+ + +
Sbjct: 4 TRRIVFSGDLGAPHSPFLPAP-VSPERVDVLVLESTYGDRLHENRLNRQERLEVAIDRAL 62
Query: 199 EKGGKVLIPVFALGRAQELCILLETYWERMNLKYP 303
G +LIP F++GR QEL +E R L P
Sbjct: 63 ADHGTLLIPAFSMGRTQELLYEIEDILHRKALLGP 97
>SB_59520| Best HMM Match : RMMBL (HMM E-Value=6.4e-18)
Length = 415
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 451 DNPGAMVVFATPGMLHAGLSLNIFKKWAPHEQNMVIM 561
D+ G VV A+PGM+ +GLS +F++W +N VI+
Sbjct: 137 DDIGPSVVMASPGMMQSGLSRELFEQWCTDRRNGVII 173
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 1 FWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI 114
F + + ++YTGD++ DRHL AA I PD+LI
Sbjct: 93 FMLEIAGVKILYTGDFSRQEDRHLMAAEIPSISPDVLI 130
>SB_59796| Best HMM Match : RMMBL (HMM E-Value=0.18)
Length = 76
Score = 34.7 bits (76), Expect = 0.052
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 280 ERMNLKYPVYFALGLTEK 333
ERMNLK P+YF+ GLTEK
Sbjct: 2 ERMNLKAPIYFSTGLTEK 19
>SB_58448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 33.9 bits (74), Expect = 0.091
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 226 VFALGRAQELCILLETYWERMNLKYPVYFALGLTEKANNYYKM---FITWTNQKIRKTFV 396
V+A ++C L WE + L VYF + K+ F W I++TF+
Sbjct: 31 VYASHWKSQICNRLNA-WESLFLLEVVYFLSLRSRKSEPLQARSQDFERWVRLPIKRTFL 89
Query: 397 QRNMFDFKHIKP 432
N F +KH KP
Sbjct: 90 NENTFSWKHQKP 101
>SB_26200| Best HMM Match : v110 (HMM E-Value=8.1)
Length = 260
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 373 QKIRKTFVQRNMFDFKHIKPFDKSYI 450
+K KT+ FDF+ KPFDK YI
Sbjct: 29 KKDNKTYTHLVKFDFQPQKPFDKCYI 54
>SB_48800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 259 YTTPELYPMQIQVLVLYHLFPHTRELF*GNLFPY 158
+ +PE YP I+VL L+PHTR +PY
Sbjct: 14 FNSPEQYPY-IRVLNSSELYPHTRVFNSSEQYPY 46
>SB_1634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -2
Query: 561 HYDHVLFMRCPLFKYV*G*SSMQHSRCCKNNHSPRIIYIRLIKWFNMFKIKHVSLHKSLS 382
H+ L RC L + S +HS CC N+ + I ++ K N+ IK LH+ +
Sbjct: 432 HHTRFLCCRC-LNSFRCKQSLEKHSECCGNHEAVGIEMPKIDKDGNLPHIKFKKLHRKMR 490
Query: 381 YLLISPC 361
L C
Sbjct: 491 VPLCCLC 497
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,585,827
Number of Sequences: 59808
Number of extensions: 346727
Number of successful extensions: 748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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