Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H06
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens ... 48 3e-05
X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein. 35 0.30
U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein. 35 0.30
BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein. 35 0.30
AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein. 35 0.30
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe... 25 3.4
AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-depende... 25 3.4
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 25 3.4
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende... 25 3.4
AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channe... 25 3.4
X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 su... 25 3.4
U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive... 25 3.6
U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent... 25 3.6
AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q t... 25 3.6
U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent... 25 3.6
U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent... 25 3.6
>AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ16275 fis, clone NT2RI2027157, moderately
similar to Mouse SDR2 mRNA. ).
Length = 626
Score = 48.0 bits (109), Expect = 3e-05
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +2
Query: 344 SKATVKPGNSIQVIIKSMAPYVKMRNIYLQARQGDKI----VGKWTINSNDPVGQLADCG 511
S+ T +PG+ I+V + S P+ + L+AR + + +G +T+ ++ V QL C
Sbjct: 54 SQMTFRPGDQIEVTL-SGHPF---KGFLLEARNAEDLNGPPIGSFTLIDSE-VSQLLTCE 108
Query: 512 E-QGNTVTHKGHHPDLDSDTVAYLWTAPNDITGEVKFRASIIQSFVIFWVGIESP 673
+ QG+ V+H+ + + W AP+ +F ++++ + I+WV I P
Sbjct: 109 DIQGSAVSHRSASKKTE---IKVYWNAPSSAPNHTQFLVTVVEKYKIYWVKIPGP 160
>X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein.
Length = 754
Score = 34.7 bits (76), Expect = 0.30
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 331 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQ 462
H + E + +Y+ G R E+ PPG SR +DRR+
Sbjct: 580 HDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR 623
>U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein.
Length = 754
Score = 34.7 bits (76), Expect = 0.30
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 331 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQ 462
H + E + +Y+ G R E+ PPG SR +DRR+
Sbjct: 580 HDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR 623
>BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein.
Length = 739
Score = 34.7 bits (76), Expect = 0.30
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 331 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQ 462
H + E + +Y+ G R E+ PPG SR +DRR+
Sbjct: 565 HDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR 608
>AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein.
Length = 571
Score = 34.7 bits (76), Expect = 0.30
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 331 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQ 462
H + E + +Y+ G R E+ PPG SR +DRR+
Sbjct: 397 HDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR 440
>AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform A-1 protein.
Length = 2510
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 2208 PKDRKHRQHHHHH 2220
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 2217 HHHHHHHHHPPPPDK 2231
>AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2506
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 2202 PKDRKHRQHHHHH 2214
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 2211 HHHHHHHHHPPPPDK 2225
>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2505
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 2203 PKDRKHRQHHHHH 2215
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 2212 HHHHHHHHHPPPPDK 2226
>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2472
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 2203 PKDRKHRQHHHHH 2215
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 2212 HHHHHHHHHPPPPDK 2226
>AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform 1A-2 protein.
Length = 2266
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 2208 PKDRKHRQHHHHH 2220
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 2217 HHHHHHHHHPPPPDK 2231
>X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 subunit
protein.
Length = 2262
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 2204 PKDRKHRQHHHHH 2216
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 2213 HHHHHHHHHPPPPDK 2227
>U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive
calcium channel protein.
Length = 1194
Score = 25.4 bits (53), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 891 PKDRKHRQHHHHH 903
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 900 HHHHHHHHHPPPPDK 914
>U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 1182
Score = 25.4 bits (53), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 879 PKDRKHRQHHHHH 891
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 888 HHHHHHHHHPPPPDK 902
>AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q type
calcium channel alpha 1A subunit protein.
Length = 980
Score = 25.4 bits (53), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 677 PKDRKHRQHHHHH 689
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 686 HHHHHHHHHPPPPDK 700
>U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 25.4 bits (53), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 891 PKDRKHRQHHHHH 903
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 900 HHHHHHHHHPPPPDK 914
>U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 25.4 bits (53), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 291 PRIRLHRKPHHHH 329
P+ R HR+ HHHH
Sbjct: 891 PKDRKHRQHHHHH 903
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 306 HRKPHHHHTPSPQAK 350
H HHHH P P K
Sbjct: 900 HHHHHHHHHPPPPDK 914
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,879,517
Number of Sequences: 237096
Number of extensions: 2126374
Number of successful extensions: 9413
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9387
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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