Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H06
         (675 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g32090.1 68414.m03949 early-responsive to dehydration protein...    31   0.53 
At5g63720.1 68418.m07998 hypothetical protein                          29   2.8  
At3g56720.1 68416.m06309 expressed protein                             29   2.8  
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kina...    29   2.8  
At2g21480.1 68415.m02556 protein kinase family protein contains ...    28   5.0  

>At1g32090.1 68414.m03949 early-responsive to dehydration
           protein-related / ERD protein-related similar to ERD4
           protein (early-responsive to dehydration stress)
           [Arabidopsis thaliana] GI:15375406; contains Pfam
           profile PF02714: Domain of unknown function DUF221
          Length = 806

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +1

Query: 280 EHDTPASGSTASLTTTIHHH-------PKQSHSEAW*FNSSDYQEHGTVRKNEKH 423
           +H+T +S     L T+ HHH       P   ++ A+  +SS Y+ H    + E+H
Sbjct: 747 KHETQSSSPVTELGTSSHHHHVYNSTSPSSHYASAYEQSSSQYEYHYNTHQYEEH 801


>At5g63720.1 68418.m07998 hypothetical protein 
          Length = 492

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/70 (24%), Positives = 25/70 (35%)
 Frame = +1

Query: 331 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQVDHQFERPSGTTCRLR 510
           HHH  +    AW    S +      +  E+  P   S+G    +  HQ          L 
Sbjct: 378 HHHHDKEKPSAWNKLQSKFHHKHQEKSKERKRPMSESKGLTTHKQQHQGGHFHALVEGLV 437

Query: 511 RTRQHRDSQR 540
           R R+H   Q+
Sbjct: 438 RHRKHSKKQK 447


>At3g56720.1 68416.m06309 expressed protein 
          Length = 386

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 331 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQVDHQFER 483
           H H + S  + + +   +Y  HG   ++      G  R  DRR+V+ ++ R
Sbjct: 90  HRHDRYSRDDNYGYKRDEYNRHGRDARSTSRDSRG-GRHSDRRRVETEYSR 139


>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 382 DYQEHGTVRKNEKHLPPGSSRGQDRRQVDHQFERPSGTTCR 504
           D+  HG V K+ +    G S GQD+ ++ ++ E   G   R
Sbjct: 256 DFTCHGPVSKSARFSGSGQSEGQDKNRIVYEREYMQGVLIR 296


>At2g21480.1 68415.m02556 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 871

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 497 LADCGEQGNTVTHKGHHPDLDSDTVAYLWTAPNDI 601
           L DCG + +T T +G     DS+TV Y+  A +DI
Sbjct: 58  LIDCGSKSSTKTPEGRVFKSDSETVQYI-EAKDDI 91


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,431,885
Number of Sequences: 28952
Number of extensions: 307651
Number of successful extensions: 912
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)