Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_H04
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-1|CAB03158.1|  667|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z92829-1|CAB07339.1|  161|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical pr...    27   6.4  
AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical ...    27   6.4  

>Z81095-1|CAB03158.1|  667|Caenorhabditis elegans Hypothetical
           protein F59F4.1 protein.
          Length = 667

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 297 CKGPNLFLVLIKREETSHRLKEI 229
           CKGP+ F+V ++ E+T + LK I
Sbjct: 209 CKGPHPFIVQLRDEDTHYPLKGI 231


>Z92829-1|CAB07339.1|  161|Caenorhabditis elegans Hypothetical
           protein F10A3.1 protein.
          Length = 161

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 409 LLISFF-IFDQILIWFYRSSCHFLGFYCTCYPWYVLINVCVYV 534
           ++ +FF +F Q  I  Y  S   + FY T   WY L +  +Y+
Sbjct: 17  IVCNFFGVFSQAWITDYGGSIGIVPFYSTEVGWYALASWMMYI 59


>Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical
           protein F22D6.6 protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 394 CGNS*LLISFFIFDQILIWFYRSSCHFLGFYCTCYPWYVL 513
           C N+ LL  FFI D ++ W        L  +   YPW  +
Sbjct: 118 CRNNELLKVFFIDDAVIAWVQPECLGELDQHYMYYPWQAI 157


>AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical
           protein ZC190.2 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 412 LISFFIFDQILIWFYRSSCHFLGFYCTCYPWYVLI 516
           L  FF  D    +FY  +  F+  YC  YPW +++
Sbjct: 238 LAGFFGGDMDSGFFYMMNL-FINLYCLVYPWTIML 271


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,967,938
Number of Sequences: 27780
Number of extensions: 179520
Number of successful extensions: 383
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)