BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_H02 (431 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 30 0.92 04_03_0305 - 14125193-14125421,14125666-14127104 29 1.2 10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 29 1.6 12_02_0674 - 21745321-21746223,21746229-21747608 28 2.8 12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 28 2.8 01_06_0146 + 26969011-26969995,26970878-26970930 28 3.7 01_01_0595 - 4430738-4430785,4430904-4432679 27 6.5 06_03_0209 + 17965828-17965888,17965913-17966329,17966501-17966523 27 8.6 04_01_0266 - 3563075-3563109,3563405-3564754,3564862-3564965,356... 27 8.6 03_02_0534 - 9267297-9267734,9268376-9268649,9268782-9268889,926... 27 8.6 01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873... 27 8.6 01_05_0691 + 24330491-24332269 27 8.6 01_01_0578 - 4296867-4296913,4296927-4297015,4297270-4297394,429... 27 8.6 >03_02_0981 + 12917195-12917572,12917661-12917818,12918732-12918765, 12918942-12919074,12919167-12919221,12919281-12920064, 12920440-12920769,12920788-12920895,12921259-12921678, 12921775-12921847,12922291-12922376,12922873-12922992, 12923086-12923156,12923350-12923449 Length = 949 Score = 29.9 bits (64), Expect = 0.92 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Frame = -2 Query: 109 CIQCRP---SLCCCESFAYSACPECIGRWYN 26 C QCR ++CC C CI RWY+ Sbjct: 151 CHQCRRVANTICCTSCDRRGYCTNCISRWYS 181 >04_03_0305 - 14125193-14125421,14125666-14127104 Length = 555 Score = 29.5 bits (63), Expect = 1.2 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = -3 Query: 201 DALAVGVPSMYTNNLPASTFVCQSIA--ANTEIVSNVAPVYAVVKVLHTLHVLNALVGGI 28 DA GVP +P + V + A EIV+ VA A K + LH+++A+ + Sbjct: 475 DAAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKSV 534 Query: 27 TG 22 +G Sbjct: 535 SG 536 >10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526, 5956971-5957592 Length = 357 Score = 29.1 bits (62), Expect = 1.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 224 QSPIKQIPTLWLLAFPACIPTTFQPRPSYASPSLPT 117 Q+ + Q P + P +PTT P P+ +P LPT Sbjct: 17 QAAMAQRPGMPPAVVPPSLPTTTPPAPTVVAPPLPT 52 >12_02_0674 - 21745321-21746223,21746229-21747608 Length = 760 Score = 28.3 bits (60), Expect = 2.8 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 9/84 (10%) Frame = -1 Query: 314 YSELITPSCTPCAMRDFVVD---NCFSGGRSSRQSPIKQIPTL-----WLLAFPACIPTT 159 Y + P+C P +D NC GGR +++ ++ P L + +P++ Sbjct: 349 YFSVEPPACVPAETAMVELDDKGNCLGGGRPEQKTSLECAPLLKRPIDCRTNTCSALPSS 408 Query: 158 FQPRPSYASPSLPTQKLYPM-SPQ 90 +P P +P+ PT P+ SP+ Sbjct: 409 SKPAPKKITPTPPTLAPPPLISPK 432 >12_02_0118 - 13869237-13869307,13869375-13869465,13870321-13870440, 13870668-13870795,13871159-13871270,13871719-13871817, 13871918-13871992,13872099-13872320,13873177-13874034 Length = 591 Score = 28.3 bits (60), Expect = 2.8 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Frame = -1 Query: 242 GGRSSRQSPIK--QIPTLWLLAFPACIPTTFQPRPSYASPSLPTQKLYP 102 GG S I+ Q P FP P QP P +A P+ P Q+ P Sbjct: 47 GGNGPVPSSIRAPQAPPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPP 95 >01_06_0146 + 26969011-26969995,26970878-26970930 Length = 345 Score = 27.9 bits (59), Expect = 3.7 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -1 Query: 185 AFPACIPTTFQPRPSYASPSLPTQKLYPMSPQFML 81 A P P QP P PSLP P SP+ ML Sbjct: 101 AAPPPAPAPDQPAPPSPPPSLPPSPPAPGSPESML 135 >01_01_0595 - 4430738-4430785,4430904-4432679 Length = 607 Score = 27.1 bits (57), Expect = 6.5 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 10/72 (13%) Frame = -1 Query: 296 PSCTPCAMRDFVVDNCFSGGRSSRQSPIKQ---IPTLWLLAFPACIPTTFQ-------PR 147 P C P R + GG + P K+ P + PAC+P + P Sbjct: 55 PVCLPAKKRAYAAAAAVEGGGFALCLPAKKRAYAPPVDDAVAPACLPAKKRIHAPPPPPP 114 Query: 146 PSYASPSLPTQK 111 S ASPS+PT K Sbjct: 115 DSGASPSVPTTK 126 >06_03_0209 + 17965828-17965888,17965913-17966329,17966501-17966523 Length = 166 Score = 26.6 bits (56), Expect = 8.6 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +3 Query: 135 GIRRSRLEGCWYTCWERQQ 191 GI L G WY WER+Q Sbjct: 79 GIAELILTGAWYILWERRQ 97 >04_01_0266 - 3563075-3563109,3563405-3564754,3564862-3564965, 3564967-3565421 Length = 647 Score = 26.6 bits (56), Expect = 8.6 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = +3 Query: 90 LGRHW-IQFLCWQRWTGIRRSRL-EGCWY 170 LG W + FLC RW+ +R + L G W+ Sbjct: 287 LGSSWALDFLCAMRWSWLRHAALCTGRWH 315 >03_02_0534 - 9267297-9267734,9268376-9268649,9268782-9268889, 9269476-9269567,9269652-9269711,9269812-9269994 Length = 384 Score = 26.6 bits (56), Expect = 8.6 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = -2 Query: 133 VHRCQHRNCIQCRPSLCCCESFAYSACPEC 44 V C H+ C C +LCC + +A C Sbjct: 262 VRECGHQMCAACTLALCCHAKPSAAAATPC 291 >01_06_1513 - 37884198-37884485,37884966-37886951,37886976-37887305, 37887397-37887471,37887543-37887734,37887922-37888173, 37888248-37888803,37888881-37889088,37889624-37889736, 37890029-37890060,37890545-37890619 Length = 1368 Score = 26.6 bits (56), Expect = 8.6 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Frame = +1 Query: 91 WGDIGYNFCVGSDGLAYEGRGWKVVGIHAGNANSQSVGICLIGDWRDDL---PPEKQLST 261 W ++ +GSD L + + V +H + + Q + + W D++ PE + Sbjct: 294 WQFHNFHMLLGSDLLIFSNEKYMAVSLHLWDVSRQVTPLNWLEAWLDNIMASVPELAICY 353 Query: 262 TKSLIAQGVQL 294 ++ + QG +L Sbjct: 354 HQNGVVQGYEL 364 >01_05_0691 + 24330491-24332269 Length = 592 Score = 26.6 bits (56), Expect = 8.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 188 LAFPACIPTTFQPRPSYASP 129 + F +C TF+P+PS ASP Sbjct: 14 IKFSSCRGVTFEPKPSPASP 33 >01_01_0578 - 4296867-4296913,4296927-4297015,4297270-4297394, 4297476-4297522,4297864-4298222,4298386-4298552, 4298800-4298846,4299148-4299193,4299586-4299669, 4300801-4300869 Length = 359 Score = 26.6 bits (56), Expect = 8.6 Identities = 10/48 (20%), Positives = 23/48 (47%) Frame = +1 Query: 28 YTTDQCIQDMQSMQNFHNSINWGDIGYNFCVGSDGLAYEGRGWKVVGI 171 Y +D ++Q + N +++W ++ YN SD + + + G+ Sbjct: 182 YFSDFASYNIQKVLNHITAMHWENLSYNGAFNSDNIIFHNGAVTIQGV 229 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,050,773 Number of Sequences: 37544 Number of extensions: 314921 Number of successful extensions: 1103 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1070 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1103 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 814473264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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