Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H02
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 0.62
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 30 0.82
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 30 0.82
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 29 1.1
U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 29 1.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 1.1
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF003389-9|AAC71134.1| 282|Caenorhabditis elegans Hypothetical ... 29 1.9
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 29 1.9
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 28 2.5
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 3.3
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 28 3.3
AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical ... 28 3.3
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 28 3.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 27 5.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 27 5.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 27 5.8
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.3 bits (65), Expect = 0.62
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 224 QSPIKQIPTLWLLAFPA-CIPTTFQPRPSYASPSLPTQKLYPMSP 93
Q P P+ ++P+ P+ P PSY SPS P + Y + P
Sbjct: 358 QEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPP 402
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 HHTAIPTACYTTDQCIQDMQSMQNFHNSINWGDIG---YNFCVGS 126
++TA+ C + + M NF+NSI WGD+ Y+F V +
Sbjct: 1754 YNTALQLCCSGDEFKCRFSDRMTNFNNSIPWGDLSDPCYDFVVAT 1798
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 HHTAIPTACYTTDQCIQDMQSMQNFHNSINWGDIG---YNFCVGS 126
++TA+ C + + M NF+NSI WGD+ Y+F V +
Sbjct: 1754 YNTALQLCCSGDEFKCRFSDRMTNFNNSIPWGDLSDPCYDFVVAT 1798
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 HHTAIPTACYTTDQCIQDMQSMQNFHNSINWGDIG---YNFCVGS 126
++TA+ C + + M NF+NSI WGD+ Y+F V +
Sbjct: 1754 YNTALQLCCSGDEFKCRFSDRMTNFNNSIPWGDLSDPCYDFVVAT 1798
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 230 SRQSPIKQIPTLWLLAFPACI-PTTFQPRPSYASPSLPTQKLYPMSP 93
S S + QIP + P+ I PT+F PS +SP LP Q SP
Sbjct: 284 SLASTLAQIPMSTPVCMPSMITPTSFLDIPSTSSPMLPFQISTTTSP 330
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 230 SRQSPIKQIPTLWLLAFPACI-PTTFQPRPSYASPSLPTQKLYPMSP 93
S S + QIP + P+ I PT+F PS +SP LP Q SP
Sbjct: 324 SLASTLAQIPMSTPVCMPSMITPTSFLDIPSTSSPMLPFQISTTTSP 370
>U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical
protein K11G9.1 protein.
Length = 565
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 269 DFVVDNCF-SGGRSSRQSPIKQIPTLWLLAFPACIPTTFQPRPSYASPSLPT 117
+FV D+ F +G R++ Q+ + +WL F C P F P Y PT
Sbjct: 411 EFVGDSIFHTGVRATAQNAAEHGDEVWLYNFDYCNPDGFAPLKGYLPYIEPT 462
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 221 SPIKQIPTLWLLAFPACIPTTFQPRPSYASPSLP 120
SP +P L+ PA P T+ P P + P++P
Sbjct: 423 SPASNVPVTITLSAPAKSPATYGPAPEPSRPAVP 456
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 124 CQHRNCIQCRPSLCCCESFAYSACPEC 44
C+ R C CRP CCC C C
Sbjct: 69 CRPRCCCCCRPK-CCCTCCRTCCCTRC 94
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 124 CQHRNCIQCRPSLCCCESFAYSACPEC 44
C+ R C CRP CCC C C
Sbjct: 71 CRPRCCCCCRPK-CCCTCCRTCCCTRC 96
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 124 CQHRNCIQCRPSLCCCESFAYSACPEC 44
C+ R C CRP CCC C C
Sbjct: 74 CRPRCCCCCRPK-CCCTCCRTCCCTRC 99
>AF003389-9|AAC71134.1| 282|Caenorhabditis elegans Hypothetical
protein F23H11.6 protein.
Length = 282
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 257 DNCFSGGRSSRQSPIKQIPTLWLLAFPACIPTTFQPRPSYASPSLPT 117
+N F RS + + K IPT+ +A P P +Q P+ LPT
Sbjct: 5 NNIFIFNRSLQTTSTKNIPTVEPIALPTLDPNFWQNLPTIPPIVLPT 51
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -1
Query: 167 PTT--FQPRPSYASPSLPTQKLYPMSPQF 87
PTT ++ PSY PS K YP++P +
Sbjct: 276 PTTASYETTPSYPEPSYQVSKKYPIAPTY 304
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
1 protein.
Length = 1073
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +1
Query: 25 CYTTDQCIQDMQSMQNFHNSINWGDIGYNFCV---GSDGLAYEGRGWKVVGI 171
C D C Q + S + W D G CV GSD + W +V +
Sbjct: 574 CLPEDFCTQTVASTLTLAGPLKWSDKGNFTCVADNGSDKTDKDSSSWTIVRV 625
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 179 PACIPTTFQPRPSYASPSLPTQKLYPMSPQ 90
P I T P PS +SP L + ++Y +SP+
Sbjct: 2751 PLRIETEHAPAPSTSSPPLESTRIYYLSPK 2780
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 179 PACIPTTFQPRPSYASPSLPTQKLYPMSPQ 90
P I T P PS +SP L + ++Y +SP+
Sbjct: 2751 PLRIETEHAPAPSTSSPPLESTRIYYLSPK 2780
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 172 VYQQPSSLDLRMPVH-RCQ--HRNCIQCRPSLCCC 77
V++ P L+ +P + +C H C CRP L CC
Sbjct: 87 VFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCC 121
>AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical
protein F59B1.6 protein.
Length = 359
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 4 HTAIPTACYTTDQCIQDMQSMQNFHNSINWGDIGYNFCVGSDGLAY 141
H + ++ QCIQ + N+H++ N NFC+ S+ L +
Sbjct: 273 HVSCSNPTFSNSQCIQGPRGGHNYHDNHN----QRNFCIVSNSLRH 314
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 172 VYQQPSSLDLRMPVH-RCQ--HRNCIQCRPSLCCC 77
V++ P L+ +P + +C H C CRP L CC
Sbjct: 153 VFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCC 187
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 109 CIQCRPSLCCCESFAYSACPEC 44
C CRP CCC + C C
Sbjct: 85 CCCCRPKCCCCCRRCCTCCRTC 106
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 109 CIQCRPSLCCCESFAYSACPEC 44
C CRP CCC + C C
Sbjct: 86 CCCCRPRCCCCCRRCCTCCRTC 107
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 109 CIQCRPSLCCCESFAYSACPEC 44
C CRP CCC + C C
Sbjct: 84 CCCCRPRCCCCCRRCCTCCRTC 105
>Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical
protein F42A8.1 protein.
Length = 370
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 97 DIGYNFCVGSDGLAYE-GRGW 156
+ GY+ CVG+DG Y+ G W
Sbjct: 103 EFGYSACVGTDGRTYQKGETW 123
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 109 CIQCRPSLCCCESFAYSACPEC 44
C CRP CCC + C C
Sbjct: 85 CCCCRPRCCCCCRRCCTCCRTC 106
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 109 CIQCRPSLCCCESFAYSACPEC 44
C CRP CCC + C C
Sbjct: 86 CCCCRPRCCCCCRRCCTCCRTC 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,777,007
Number of Sequences: 27780
Number of extensions: 265076
Number of successful extensions: 912
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -