Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_H02
(431 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 1.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 2.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 2.6
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 3.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 3.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 5.9
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 5.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 5.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 5.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 5.9
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 7.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 7.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 7.8
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.0 bits (47), Expect = 1.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -2
Query: 181 SQHVYQQPSSL-----DLRMPVHRCQHRNCIQCRPS 89
++H+++ SS DL P+ QH NC+ PS
Sbjct: 270 ARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPS 305
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.2 bits (45), Expect = 2.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 235 LPPEKQLSTTKSLIAQGVQLGVISSEYKLIGHN 333
+PPE + KSL GV++G+ +Y I N
Sbjct: 154 IPPELP-NDEKSLFENGVEIGINFDKYDNIQVN 185
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 2.6
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 206 IPTLWLLAFPACIP 165
+ T+W+L+F C P
Sbjct: 186 VATVWILSFVICFP 199
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.8 bits (44), Expect = 3.4
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -2
Query: 193 GCWRSQHVYQ 164
GCW S+H ++
Sbjct: 331 GCWNSEHFFE 340
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 3.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 65 ILCMS*MHWSV 33
ILCMS +HW +
Sbjct: 295 ILCMSDLHWQL 305
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 233 SSRQSPIKQIPTLWLLAFPACIP 165
S + PI+ I WL+A + IP
Sbjct: 153 SGLKRPIRFILAAWLIALISAIP 175
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.0 bits (42), Expect = 5.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 69 LHTLHVLNALVGGITGS 19
+H LH + ++GGI G+
Sbjct: 331 VHNLHGMPGILGGIFGA 347
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 208 CLIGDWRDDLPPEKQLSTTKS 270
CL+G W D ++L T S
Sbjct: 196 CLVGTWSPDPAINRRLKETYS 216
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 208 CLIGDWRDDLPPEKQLSTTKS 270
CL+G W D ++L T S
Sbjct: 196 CLVGTWSPDPAINRRLKETYS 216
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 208 CLIGDWRDDLPPEKQLSTTKS 270
CL+G W D ++L T S
Sbjct: 196 CLVGTWSPDPAINRRLKETYS 216
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 215 IKQIPTLWLLAFPACIPTTFQ 153
+K I +WLLA +P Q
Sbjct: 172 VKFIIVIWLLALCLAVPQAIQ 192
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 7.8
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = +2
Query: 365 HCLRTFLPGNIFILDMWSS 421
H ++TF P + ++ W S
Sbjct: 202 HLIQTFAPSTLVVMLSWFS 220
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 7.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 54 HAEYAKLSQQHKLGRHWIQFL 116
HAEY+ L L RH FL
Sbjct: 197 HAEYSMLLVYFHLQRHMGNFL 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,537
Number of Sequences: 438
Number of extensions: 3065
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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