Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G15
(424 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 25 0.46
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 25 0.46
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.9
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 5.7
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 5.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 20 10.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 20 10.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 20 10.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 20 10.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 10.0
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 24.6 bits (51), Expect = 0.46
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 17 IVFCTYNLFTNVTMSEAFFDEYDYYNFD 100
IV +L T E + D+YDY N D
Sbjct: 6 IVILILSLLTWTYAEELYSDKYDYVNID 33
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 24.6 bits (51), Expect = 0.46
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 17 IVFCTYNLFTNVTMSEAFFDEYDYYNFD 100
IV +L T E + D+YDY N D
Sbjct: 6 IVILILSLLTWTYAEELYSDKYDYVNID 33
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 1.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 150 GRPPNTRITSTPLDILEXXXXXXXXXXTTKSPINN 254
G P NTR TP + LE +PI N
Sbjct: 140 GNPWNTRYCLTPTERLEALCWTQDEDVICSTPIGN 174
Score = 20.6 bits (41), Expect = 7.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 261 YIYCLLDFLLFSVFTNFVTIFLEC 190
Y++ LLD S F +F EC
Sbjct: 440 YVFQLLDSYAVSGFCLLFLMFFEC 463
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 1.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 150 GRPPNTRITSTPLDILEXXXXXXXXXXTTKSPINN 254
G P NTR TP + LE +PI N
Sbjct: 193 GNPWNTRYCLTPTERLEALCWTQDEDIICSTPIGN 227
Score = 20.6 bits (41), Expect = 7.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 261 YIYCLLDFLLFSVFTNFVTIFLEC 190
Y++ LLD S F +F EC
Sbjct: 493 YVFQLLDSYAVSGFCLLFLMFFEC 516
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 5.7
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +2
Query: 134 KQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 253
+ R KRE S S ++ + N NN NK+
Sbjct: 66 RSRDKRERERSKERKIISSLSNNYISNISNYNNNNNYNKK 105
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 5.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 360 RPAASSGIRHNVLLSLGNSVIFLLQAI 280
RP+ G++ +VL+ + + +LLQ I
Sbjct: 121 RPSKKEGLQFDVLVKVDMTRQYLLQLI 147
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 5.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 360 RPAASSGIRHNVLLSLGNSVIFLL 289
RP SGI ++S N +F+L
Sbjct: 847 RPIVQSGIFGKYMVSPSNDALFVL 870
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +2
Query: 23 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 115
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +2
Query: 23 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 115
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +2
Query: 23 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 115
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/31 (22%), Positives = 15/31 (48%)
Frame = +2
Query: 23 FCTYNLFTNVTMSEAFFDEYDYYNFDHDKHI 115
+ YN + N + + + YYN ++ + I
Sbjct: 91 YSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.2 bits (40), Expect = 10.0
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 337 PP*RPPFARQLGNIPSTSHSRVYSPLHLLFIGLFVVLR 224
P + PF LG + +S Y PL ++ + + R
Sbjct: 194 PEDKCPFTEHLGYLIFSSTISFYLPLFVMVFTYYKIYR 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,417
Number of Sequences: 438
Number of extensions: 2355
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -