Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G13
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    30   0.021
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.8  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   2.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +2

Query: 68  GWGKNRFGKDDEFAVVLKKIELDMVEHSRCNDLLRYTELGARYNLHSSFVCAGGEEGKDM 247
           GWG   F  +   + +L+K  L+M+    C     Y   G   N+  + +CA  + GKD 
Sbjct: 296 GWGHTSF--NGMLSHILQKTTLNMLTQVEC-----YKYYG---NIMVNAMCAYAK-GKDA 344

Query: 248 CTGDGGGPL 274
           C  D GGP+
Sbjct: 345 CQMDSGGPV 353


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 GTPSLAPGITCIAPSSAPEG 230
           GTP    G T I+P ++P+G
Sbjct: 333 GTPGSGDGDTEISPQTSPQG 352


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 615 LELRKLIIYDTLVFVMSNHY 556
           L+LR  + YD    +MS HY
Sbjct: 286 LDLRSQLEYDLQTSIMSRHY 305


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 231 RREKTCARVMAVVHWLVPSAIT 296
           RR K  A +M V  W++  AIT
Sbjct: 150 RRSKRLAGLMIVAVWVLAGAIT 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,804
Number of Sequences: 438
Number of extensions: 3371
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)