Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G12
         (682 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.)              252   2e-67
SB_6531| Best HMM Match : EGF_2 (HMM E-Value=0.0016)                   31   0.65 
SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39)               31   0.86 
SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.5  
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)                     29   4.6  
SB_7681| Best HMM Match : Annexin (HMM E-Value=0)                      28   8.0  

>SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 224

 Score =  252 bits (617), Expect = 2e-67
 Identities = 120/198 (60%), Positives = 143/198 (72%)
 Frame = -2

Query: 675 RARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAV 496
           +  + +L+LQKRLAAS+++CGKKK+WLDPNE NEIAN NSRQN+RK+IKDGL+IKKP  V
Sbjct: 26  KVHVGTLRLQKRLAASLLKCGKKKIWLDPNECNEIANANSRQNVRKLIKDGLIIKKPEIV 85

Query: 495 HSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDR 316
           HSRARVRK  EAR KGRH G GKR+GTANARMPQK +W              R AKKID 
Sbjct: 86  HSRARVRKADEARSKGRHSGHGKRKGTANARMPQKTIWIRRMRVLRRLLRKYREAKKIDN 145

Query: 315 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 136
           H+YHSLYMK+KGNVFKNKRVLMEYIH+KKAEKAR+K+LSDQ                   
Sbjct: 146 HMYHSLYMKSKGNVFKNKRVLMEYIHKKKAEKARSKLLSDQAEARRNKNKAAKQRRDDRM 205

Query: 135 XXXXXELLQTFAREDEAA 82
                ++L  +A+E+EAA
Sbjct: 206 EQKRKDMLSAYAKEEEAA 223


>SB_6531| Best HMM Match : EGF_2 (HMM E-Value=0.0016)
          Length = 407

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +1

Query: 457 ARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLFFTASHNRGC 636
           A L + +N +   ++NW+   + +    TD++SG+ +     L+     +F+T S   GC
Sbjct: 261 ADLQLKSNATGSDNTNWYQKSRLLESPWTDLVSGLLVPTKFVLIGCCSRMFYTMSGEGGC 320


>SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39)
          Length = 246

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 10/28 (35%), Positives = 21/28 (75%)
 Frame = -3

Query: 470 TQRRAGKDVTVALVRGEVQLMLECHKKN 387
           +++R GKD+T+A ++G+++L+  C   N
Sbjct: 23  SEKRYGKDITIAALKGKLELITGCSSAN 50


>SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 489 RARVRKNTEARRKGRHCGFGKRRGTANAR 403
           +A  RK    RR+ R  G  K+R TANAR
Sbjct: 17  KANSRKKRRRRRRPRLTGLSKQRQTANAR 45


>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
          Length = 577

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
 Frame = +1

Query: 460 RLCVFANTSAGMDSNWFLD----DQTILDHLTDVL 552
           ++CV A  SA  D+ W +     +QTI +HL DVL
Sbjct: 252 QMCVQAINSANSDARWLVQSLCCNQTIDEHLIDVL 286


>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 426

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = -1

Query: 337 NSEEDRQASLPFLVHEGEG*CVQEQACPHGVHPQEE--G*EG*DQDA**PSRGAPQQGEG 164
           + EE+R    P   HE E    +    P G H +EE  G     QD     RGA   G+ 
Sbjct: 308 HEEEERGVHPPEQHHEEE----ERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQD 363

Query: 163 SPQAPRGAHRREE 125
             +  RGAH  E+
Sbjct: 364 HEEEERGAHPPEQ 376


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,162,896
Number of Sequences: 59808
Number of extensions: 368472
Number of successful extensions: 996
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)