Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G11
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 217 3e-56
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 217 3e-56
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 217 3e-56
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 217 3e-56
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 217 3e-56
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 217 3e-56
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 8e-19
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 32 2.1
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 32 2.1
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 32 2.1
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 32 2.1
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 32 2.1
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 32 2.1
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 32 2.1
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 32 2.1
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 32 2.1
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 32 2.1
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 4.9
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 4.9
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 4.9
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 4.9
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 30 6.5
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 217 bits (530), Expect = 3e-56
Identities = 102/143 (71%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +3
Query: 141 REIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHET 317
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ ++
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 318 RVAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEH 497
R KQKRPRSRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 498 KVDTFQSVYEKLTGREVTFESPE 566
KV+TF VY+KLTG++V FE PE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 5 STKILKAGAIEPDTFETSISQALVELETNSDLKAQSGGELYITKAK 142
S KI+K +PD FE+ ISQAL+ELE NSDLKAQ EL IT AK
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQL-RELNITAAK 49
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 217 bits (530), Expect = 3e-56
Identities = 102/143 (71%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +3
Query: 141 REIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHET 317
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ ++
Sbjct: 47 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 106
Query: 318 RVAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEH 497
R KQKRPRSRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EH
Sbjct: 107 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 166
Query: 498 KVDTFQSVYEKLTGREVTFESPE 566
KV+TF VY+KLTG++V FE PE
Sbjct: 167 KVETFSGVYKKLTGKDVNFEFPE 189
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 5 STKILKAGAIEPDTFETSISQALVELETNSDLKAQSGGELYITKAK 142
S KI+K +PD FE+ ISQAL+ELE NSDLKAQ EL IT AK
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQL-RELNITAAK 47
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 217 bits (530), Expect = 3e-56
Identities = 102/143 (71%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +3
Query: 141 REIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHET 317
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ ++
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 318 RVAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEH 497
R KQKRPRSRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 498 KVDTFQSVYEKLTGREVTFESPE 566
KV+TF VY+KLTG++V FE PE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 5 STKILKAGAIEPDTFETSISQALVELETNSDLKAQSGGELYITKAK 142
S KI+K +PD FE+ ISQAL+ELE NSDLKAQ EL IT AK
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQL-RELNITAAK 49
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 217 bits (530), Expect = 3e-56
Identities = 102/143 (71%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +3
Query: 141 REIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHET 317
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ ++
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 318 RVAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEH 497
R KQKRPRSRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 498 KVDTFQSVYEKLTGREVTFESPE 566
KV+TF VY+KLTG++V FE PE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 5 STKILKAGAIEPDTFETSISQALVELETNSDLKAQSGGELYITKAK 142
S KI+K +PD FE+ ISQAL+ELE NSDLKAQ EL IT AK
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQL-RELNITAAK 49
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 217 bits (530), Expect = 3e-56
Identities = 102/143 (71%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +3
Query: 141 REIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHET 317
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ ++
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 318 RVAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEH 497
R KQKRPRSRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 498 KVDTFQSVYEKLTGREVTFESPE 566
KV+TF VY+KLTG++V FE PE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 5 STKILKAGAIEPDTFETSISQALVELETNSDLKAQSGGELYITKAK 142
S KI+K +PD FE+ ISQAL+ELE NSDLKAQ EL IT AK
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQL-RELNITAAK 49
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 217 bits (530), Expect = 3e-56
Identities = 102/143 (71%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
Frame = +3
Query: 141 REIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHET 317
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ ++
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 318 RVAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEH 497
R KQKRPRSRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 498 KVDTFQSVYEKLTGREVTFESPE 566
KV+TF VY+KLTG++V FE PE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 5 STKILKAGAIEPDTFETSISQALVELETNSDLKAQSGGELYITKAK 142
S KI+K +PD FE+ ISQAL+ELE NSDLKAQ EL IT AK
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQL-RELNITAAK 49
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.1 bits (221), Expect = 8e-19
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +3
Query: 321 VAYKQKRPRSRTLTSVYDAVLEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHK 500
VAY SRTLT+V+DA+LEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHK
Sbjct: 1 VAYLLNYSFSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHK 60
Query: 501 VDTFQSVYEKLTGREVTF 554
V + E+ + E F
Sbjct: 61 VIGQHFIMERFSHSESGF 78
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPS 308
+P +EL +K + + V MPK K + K+ + +R +KK G + + +PKP
Sbjct: 742 VPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPE 796
Query: 309 HETRVAYKQKRPRSRTLTSVYDAVLEDLVFP 401
T V+ K + +T TS+ + + + P
Sbjct: 797 PVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 263
L P + H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 263
L P + H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 263
L P + H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 129 LPRPREIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 263
L P + H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 156 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 263
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,543,043
Number of Sequences: 237096
Number of extensions: 2216202
Number of successful extensions: 3864
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3864
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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