Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G09
(461 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 29 0.35
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 29 0.35
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 29 0.46
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 28 0.60
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 27 1.4
SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|c... 27 1.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 2.4
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 4.3
SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces po... 25 5.6
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 7.4
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 24 9.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 9.8
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 24 9.8
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 24 9.8
SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 24 9.8
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 24 9.8
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 24 9.8
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 29.1 bits (62), Expect = 0.35
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 225 WYMHFCSRAYYNSNWHCSNLSALSVY 148
W+ CS + + WH LS +S Y
Sbjct: 195 WFATICSETHIENEWHVGPLSVVSAY 220
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 29.1 bits (62), Expect = 0.35
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 70 YYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQS--L 243
Y++ H Q+ SHS+D N++ R + I+P T +P+A + L
Sbjct: 154 YWTIDPDHMQNFVSVRLHRSHSTDS--NSKKRPSSKCHE---IKPLTTREIPLARKRSRL 208
Query: 244 NTAQTGAAYDQSSVNSEAEILNNQNQPN 327
N+ + + SS N AE+ N+ +QP+
Sbjct: 209 NSFNSSTSTSGSSSNVAAEVSNDASQPS 236
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 28.7 bits (61), Expect = 0.46
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 304 LNNQNQPNIY*PTGQAKHYESAYSYHKEWEKHDTKXTENPLPKNSELYEDSQ 459
L NQ+Q I + +A H E+ + W+K TE K+ E YED Q
Sbjct: 213 LTNQHQLEIELESTKASHTENLGELTRNWQKAMDDVTEKFASKSKE-YEDLQ 263
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 0.60
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = +1
Query: 67 GYYSQSGSHRQSSYDHS---NTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQ 237
G +QS +R S D + ++HS D A S I+ +P T P T
Sbjct: 335 GAQTQSTPNRISRSDSPIVYDVDTHSEDNASTASSEAISQSMRSFQPQPNTGSPFPRFTS 394
Query: 238 SLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYS 375
+ + + QS N LN N N+ PT Q YS
Sbjct: 395 TNTEDEQESDIPQSDANDSTVNLNQPNYANLT-PTPQVSPKRPTYS 439
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 27.1 bits (57), Expect = 1.4
Identities = 30/136 (22%), Positives = 47/136 (34%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
DS R V++Y+ + + Y +S Q SDY RQ+T P RV
Sbjct: 87 DSYRLVRQYEAPKELLNEYADESYDPMQERQSKKQIQDRESDYQKQRYDRQLT--PTRV- 143
Query: 196 IRPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYS 375
P TQS + E + NQ + + ES
Sbjct: 144 -----DAFQPDGTQSNGRSYAEVMRQVELEKEERRVHMELNQRRREGTLKEVEEEESISD 198
Query: 376 YHKEWEKHDTKXTENP 423
+E E ++T+ ++ P
Sbjct: 199 KKRELELNNTEISQKP 214
>SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|chr
2|||Manual
Length = 812
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 12 IRQHTWSKTIRLWWTRSQWLLLSI 83
I Q WSK R+W W +LSI
Sbjct: 80 IDQSRWSKLWRIWNVGYSWFILSI 103
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 2.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 118 YCDHMNFAYENLIESNSHWLLV 53
+C +NFA ENL+ +N L+V
Sbjct: 1837 HCSSLNFAKENLLRTNVKLLIV 1858
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 25.4 bits (53), Expect = 4.3
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 82 SGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVH 219
SG+ R +YD N SHS + V I + + I P K H
Sbjct: 1275 SGNLRLLAYDPENPESHSGERLVTRGDFHIGNVITAMTILPKEKKH 1320
>SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 25.0 bits (52), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 370 YSYHKEWEKHDTKXTENPLPKN 435
Y K+WEK +T + LPKN
Sbjct: 91 YYLLKDWEKSETYSEQVSLPKN 112
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 24.6 bits (51), Expect = 7.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 46 YGGQEASGYYSQSGSHRQSSYDHSNTNSHS 135
+ + + G YS S RQSS SNT+SH+
Sbjct: 862 FSDKSSRGMYSSS---RQSSRSGSNTHSHA 888
Score = 24.6 bits (51), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 22 TRGVKRYDYGGQEASGYYSQSGSHR 96
+RGV + +GG S SQ GS R
Sbjct: 928 SRGVSHHGHGGMSGSHRGSQRGSRR 952
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 7 QELDSTRGVKRYDYGGQEAS 66
++L ++ VK++DYGG++ S
Sbjct: 252 KDLKKSKRVKKHDYGGEDWS 271
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.2 bits (50), Expect = 9.8
Identities = 19/93 (20%), Positives = 39/93 (41%)
Frame = +1
Query: 13 LDSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRV 192
L S+ + +S + S + + SSY S++ SS ++ S +T+ +
Sbjct: 178 LSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLST 237
Query: 193 IIRPGTKVHVPIATQSLNTAQTGAAYDQSSVNS 291
P T + SL+++ + + SS +S
Sbjct: 238 SSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSS 270
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 24.2 bits (50), Expect = 9.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 347 KLSTTNQRTVTTRNGKNMIQXLQRILFLK 433
+LS TNQ VTT G+ + Q + +L+
Sbjct: 131 ELSKTNQHPVTTEEGQAVAQKIGAYKYLE 159
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +1
Query: 64 SGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAM 180
+GYY + Y +N N+ S+D N + I ++
Sbjct: 12 NGYYISNSKLSSGFYKRNNANTASNDEKPNLEQNDIPSV 50
>SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 475
Score = 24.2 bits (50), Expect = 9.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 1 NTQELDSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDH 114
N + ++S R R D+G + GY+ +G R +H
Sbjct: 201 NREHIESVRVDFREDFGCEGRGGYFEGAGILRDVVQNH 238
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 24.2 bits (50), Expect = 9.8
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 336 LIYVGLILVIQNFSFAIY*TLIIS--STSLCCIKTLSSDWYMHFC 208
L+ +L ++N L+IS S+ C KT ++ ++H+C
Sbjct: 321 LVLRNSVLSVENAKHVAQTKLVISVLEASIRCAKTFNNLEFLHYC 365
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 24.2 bits (50), Expect = 9.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 40 YDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITA 177
Y G Y+ S + + + D+S T+S++S N SR A
Sbjct: 56 YGVNNSMGGGMYNTSENTQFMNTDYSQTSSYASTPMSNAYSRDAPA 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.122 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,739,178
Number of Sequences: 5004
Number of extensions: 31995
Number of successful extensions: 90
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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