Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G09
(461 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5811| Best HMM Match : IKI3 (HMM E-Value=0.0021) 38 0.005
SB_17590| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07) 29 1.4
SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_58836| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 29 2.5
SB_46611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08) 28 3.3
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 28 4.3
SB_46836| Best HMM Match : COX4_pro (HMM E-Value=6.2) 27 5.7
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_12448| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_4483| Best HMM Match : K-box (HMM E-Value=10) 27 7.6
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 27 7.6
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 27 7.6
SB_29969| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 27 10.0
>SB_5811| Best HMM Match : IKI3 (HMM E-Value=0.0021)
Length = 567
Score = 37.5 bits (83), Expect = 0.005
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Frame = +1
Query: 52 GQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRP--GTKVHVP 225
GQ AS ++ S H QS HS T++ S+ ++ + +T M V+ P V +P
Sbjct: 368 GQYASYEWTWSTLHSQS---HS-THNISTVAVIDGANLLLTPMKYMVVPPPMAAQTVAMP 423
Query: 226 IATQSLNTAQTGAAYDQSSVNSEAEI--LNNQNQPNIY*PTGQAKHYESAYSYHKEWEKH 399
A QS+ A A D + + S +I L + P + P G + YS+ E ++
Sbjct: 424 AAIQSVTFAPPPACNDMAVLLSSGDIAILRMPSAPAEFIPPGSPPRLQGVYSHVTELDEP 483
Query: 400 DTKXTENP 423
+ T NP
Sbjct: 484 AMRVTSNP 491
>SB_17590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 181 PVRVIIRPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHY 360
P+ V + GT+V++ + + L A D + ILN +P GQ +
Sbjct: 325 PLEVPLEVGTEVYIAVNEEDLQDKGRRRATDPWWTSKAYSILNRVMEP------GQPAMH 378
Query: 361 ESAYSYHKEWEKHDTKXTENPLP 429
SAYS H+ K E+ +P
Sbjct: 379 YSAYSKHRSTRSQLPKARESDIP 401
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.5 bits (63), Expect = 1.4
Identities = 33/143 (23%), Positives = 58/143 (40%)
Frame = +1
Query: 19 STRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVII 198
ST+ + Y +A+ YS S +Y T ++S+ + N ++ +
Sbjct: 15 STKATENYS---TKATENYSTKASE---NYSTKATENYSTKASENYSTKATEKYSTKAAE 68
Query: 199 RPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYSY 378
TK +T++ T AA + S+ +E N + T +++Y +
Sbjct: 69 NYSTKATENYSTKATENYSTKAAENYSTKATE----NYSTKATENYSTKASENYTTENYS 124
Query: 379 HKEWEKHDTKXTENPLPKNSELY 447
K EK+ TK TEN K +E Y
Sbjct: 125 TKAAEKYSTKATENYSTKATENY 147
Score = 27.5 bits (58), Expect = 5.7
Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 3/146 (2%)
Frame = +1
Query: 19 STRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVII 198
ST+ + Y E + +Y T ++S+ N ++ +
Sbjct: 140 STKATENYSTKATENYSTKATENYKATENYSTKATENYSTKSKENNSTKATENYSTKATE 199
Query: 199 RPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHY--ESAY 372
+ TK +T++ T A S+ SE N + T A++Y ++
Sbjct: 200 KYSTKATENFSTKATENYSTKATEKYSTKASE----NYSTKATEKYSTKAAENYSTKATE 255
Query: 373 SYH-KEWEKHDTKXTENPLPKNSELY 447
Y K EK+ TK TEN K +E Y
Sbjct: 256 KYSTKATEKYSTKATENFSTKATENY 281
>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
Length = 1118
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +1
Query: 91 HRQSSYDHSNTNSHSSDYAVNTQ-----SRQITAMPVR 189
H + H TN+H+S +NTQ SRQ TA P+R
Sbjct: 68 HTGAHVSHGRTNNHTSHGHMNTQTETSTSRQPTAAPIR 105
>SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 29.5 bits (63), Expect = 1.4
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +1
Query: 1 NTQELDSTRGVKRYDYGGQEASGYYSQSGSHRQS---SYDHSNTNSHSSDYAVNTQSRQI 171
NT E + G Y SG+ + + H S SY+ +N ++HSS VN QI
Sbjct: 120 NTGEPVNNTGPTCYTEQPTNNSGHAANNARHPASIKDSYNIANASAHSSGGTVNA---QI 176
Query: 172 TAMPVRVIIRPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQP 324
T + + + H A Q N A+ VN+ +N QP
Sbjct: 177 T-VSGKTSSSDADQQHTVNAVQPANNTGNPASITGQPVNTTGHPESNAGQP 226
>SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +1
Query: 31 VKRYD----YGGQEASGYYSQSGSHRQSSY 108
V RYD +GG+EA G + +SG+HR+ +
Sbjct: 147 VARYDPPGNWGGREAKGAHGRSGAHRRKRH 176
>SB_58836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +1
Query: 145 AVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQP 324
A ++QSR+ P+ V + GT+V++ + + L A D + +IL +
Sbjct: 264 ARDSQSRKAPPPPLEVPLEVGTEVYIAVNEKDLQDKGRRRATDPWGTSKAYQILKRVME- 322
Query: 325 NIY*PTGQAKHYESAYSYH 381
+GQ Y +AYS H
Sbjct: 323 -----SGQPVLYYTAYSKH 336
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 148 VNTQSRQITAMPVRVIIRPGTK---VHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQN 318
+NT+ +++ A+P ++ P + VHV A + + + G D N +AE + + +
Sbjct: 894 LNTKIKKLEAIPTVALVLPDCRCYSVHVDRAEKHVGRDERGGKPDLHVNNRQAESMQSLS 953
Query: 319 QP 324
QP
Sbjct: 954 QP 955
>SB_46611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/95 (25%), Positives = 44/95 (46%)
Frame = +1
Query: 34 KRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTK 213
K YD + Y S+ S S+ H ++ S + + ++I RVI+ K
Sbjct: 171 KEYDSTDLFKNRYTSRDLS---SALSHVSSRSGVTRKSTQKNKKEIMTEETRVILPMSAK 227
Query: 214 VHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQN 318
+ PI T S + +AY +S N E ++L++++
Sbjct: 228 KYRPILTASKEKRRVRSAY-CASRNKEDKLLDHRD 261
>SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)
Length = 401
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 343 GQAKHYESAYSYHKEWEKH 399
G K E+ YSY+KEW H
Sbjct: 262 GDRKRVETTYSYNKEWLSH 280
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 303 NFSFAIY*TLIISSTSLCCIKTLSSDWYMHFCSRAYYNSNWH 178
++ ++Y L+ LC I T+S W+ SR +N +H
Sbjct: 465 HYYLSVYAALVFGLFVLCLICTMSYYWFTIVASRNLHNGMFH 506
>SB_46836| Best HMM Match : COX4_pro (HMM E-Value=6.2)
Length = 164
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 314 KINPTYINQLGKLSTTNQRTVTTRNGKNMIQXLQ 415
++NP ++ KLS T Q V NG+N LQ
Sbjct: 46 QVNPHFLQTRTKLSMTVQNLVEFINGENWFNALQ 79
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 82 SGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLNTAQTG 261
+G+ R+ + S+ + A TQ Q T P+R+ + G + HVP +T T TG
Sbjct: 842 AGNSRKRLHGRSSLLRKEPNLAEMTQPWQ-TLDPLRIRLPGGGRPHVPRSTGKNATTVTG 900
Query: 262 A 264
A
Sbjct: 901 A 901
>SB_12448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAV 150
D T ++ + GQ ++ SG + YD N DYA+
Sbjct: 989 DVTEKLREISFQGQTGLVNFTTSGDPETARYDFINFQERGGDYAI 1033
>SB_4483| Best HMM Match : K-box (HMM E-Value=10)
Length = 100
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHR---QSSYDHSNTN 126
D++ GVK+ + YYSQS + + S +DHSN +
Sbjct: 59 DASSGVKQIRHNQHGTKNYYSQSHADKFSVLSIHDHSNND 98
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 13 LDSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVN 153
+ ST YG Q ++G Y S S+ S+ + T S S+ ++N
Sbjct: 394 MQSTMQSMAGQYGSQYSTGQYGTSTSYGTSTPQYGTTTSSSAGSSMN 440
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 12 IRQHTWSKTIRLWWTRSQWLLLSIRFS 92
I+ H SKTI+ +W + LLLS+ S
Sbjct: 117 IKSHEDSKTIKAFWLLLRCLLLSVELS 143
>SB_29969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHR---QSSYDHSNTN 126
D++ GVK+ + YYSQS + + S +DHSN +
Sbjct: 57 DASSGVKQIRHNQHGTKNYYSQSHADKFSVLSIHDHSNND 96
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 40 YDYGGQEASGYYSQSGSHRQSSYDHSN 120
YDYGG GYY G+ + Y N
Sbjct: 941 YDYGGVCPPGYYCLKGTREATQYPCPN 967
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.308 0.122 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,726,573
Number of Sequences: 59808
Number of extensions: 228076
Number of successful extensions: 573
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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