Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G09
         (461 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.          30   3.4  
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.         30   3.4  
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.          30   3.4  

>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +1

Query: 16   DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYD-HSNTNSHSSDYAVNTQSRQITAMPVRV 192
            D + G  ++  G  ++SG+       RQSSY  H + +S SS Y  +  +   T+     
Sbjct: 1046 DQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQSSGYGQHGSNSGQTS----- 1100

Query: 193  IIRPGTKVHVPIATQSLNTAQTGAAYDQSS 282
                G   H P + QS    Q G+   QSS
Sbjct: 1101 ----GFGQHRPGSGQSSGFGQYGSGSGQSS 1126


>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +1

Query: 16   DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYD-HSNTNSHSSDYAVNTQSRQITAMPVRV 192
            D + G  ++  G  ++SG+       RQSSY  H + +S SS Y  +  +   T+     
Sbjct: 1046 DQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQSSGYGQHGSNSGQTS----- 1100

Query: 193  IIRPGTKVHVPIATQSLNTAQTGAAYDQSS 282
                G   H P + QS    Q G+   QSS
Sbjct: 1101 ----GFGQHRPGSGQSSGFGQYGSGSGQSS 1126


>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +1

Query: 16   DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYD-HSNTNSHSSDYAVNTQSRQITAMPVRV 192
            D + G  ++  G  ++SG+       RQSSY  H + +S SS Y  +  +   T+     
Sbjct: 1046 DQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQSSGYGQHGSNSGQTS----- 1100

Query: 193  IIRPGTKVHVPIATQSLNTAQTGAAYDQSS 282
                G   H P + QS    Q G+   QSS
Sbjct: 1101 ----GFGQHRPGSGQSSGFGQYGSGSGQSS 1126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.308    0.122    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,074,931
Number of Sequences: 237096
Number of extensions: 1072142
Number of successful extensions: 2583
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2576
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)