Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G09
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 33 0.100
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 33 0.100
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 33 0.100
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 32 0.23
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 32 0.23
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 31 0.53
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 31 0.53
X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic int... 30 0.93
AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate... 30 0.93
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 1.2
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 29 1.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 1.6
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 28 2.8
AF125446-2|AAD12805.1| 379|Caenorhabditis elegans Hypothetical ... 28 3.7
AF099914-9|AAC68759.2| 273|Caenorhabditis elegans Math (meprin-... 28 3.7
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 27 4.9
U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical pr... 27 6.5
U42841-11|AAP31429.1| 394|Caenorhabditis elegans Gex interactin... 27 8.6
U42841-10|AAM97954.1| 380|Caenorhabditis elegans Gex interactin... 27 8.6
U42841-8|AAM97953.1| 476|Caenorhabditis elegans Gex interacting... 27 8.6
U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting... 27 8.6
U42841-6|AAM97956.1| 404|Caenorhabditis elegans Gex interacting... 27 8.6
U39646-8|AAA80372.2| 336|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ... 27 8.6
L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of ... 27 8.6
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 33.1 bits (72), Expect = 0.100
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
+ST K+ GQ S S S S SS D S ++ SSD V Q+ +T++PV V
Sbjct: 1255 NSTPPKKKNSSSGQHDSSSGSSSDS---SSSDGSTSSDDSSDDEVPKQTEPVTSIPV-VA 1310
Query: 196 IRPGTKVHVPIATQSL--NTAQTGAAYDQSSVNSEAE 300
G+ +V + T S+ T + + S +SE+E
Sbjct: 1311 SDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESE 1347
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 33.1 bits (72), Expect = 0.100
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
+ST K+ GQ S S S S SS D S ++ SSD V Q+ +T++PV V
Sbjct: 1546 NSTPPKKKNSSSGQHDSSSGSSSDS---SSSDGSTSSDDSSDDEVPKQTEPVTSIPV-VA 1601
Query: 196 IRPGTKVHVPIATQSL--NTAQTGAAYDQSSVNSEAE 300
G+ +V + T S+ T + + S +SE+E
Sbjct: 1602 SDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESE 1638
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 33.1 bits (72), Expect = 0.100
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
+ST K+ GQ S S S S SS D S ++ SSD V Q+ +T++PV V
Sbjct: 1561 NSTPPKKKNSSSGQHDSSSGSSSDS---SSSDGSTSSDDSSDDEVPKQTEPVTSIPV-VA 1616
Query: 196 IRPGTKVHVPIATQSL--NTAQTGAAYDQSSVNSEAE 300
G+ +V + T S+ T + + S +SE+E
Sbjct: 1617 SDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESE 1653
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 33.1 bits (72), Expect = 0.100
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
+ST K+ GQ S S S S SS D S ++ SSD V Q+ +T++PV V
Sbjct: 1255 NSTPPKKKNSSSGQHDSSSGSSSDS---SSSDGSTSSDDSSDDEVPKQTEPVTSIPV-VA 1310
Query: 196 IRPGTKVHVPIATQSL--NTAQTGAAYDQSSVNSEAE 300
G+ +V + T S+ T + + S +SE+E
Sbjct: 1311 SDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESE 1347
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 33.1 bits (72), Expect = 0.100
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
+ST K+ GQ S S S S SS D S ++ SSD V Q+ +T++PV V
Sbjct: 1546 NSTPPKKKNSSSGQHDSSSGSSSDS---SSSDGSTSSDDSSDDEVPKQTEPVTSIPV-VA 1601
Query: 196 IRPGTKVHVPIATQSL--NTAQTGAAYDQSSVNSEAE 300
G+ +V + T S+ T + + S +SE+E
Sbjct: 1602 SDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESE 1638
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 33.1 bits (72), Expect = 0.100
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 16 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 195
+ST K+ GQ S S S S SS D S ++ SSD V Q+ +T++PV V
Sbjct: 1561 NSTPPKKKNSSSGQHDSSSGSSSDS---SSSDGSTSSDDSSDDEVPKQTEPVTSIPV-VA 1616
Query: 196 IRPGTKVHVPIATQSL--NTAQTGAAYDQSSVNSEAE 300
G+ +V + T S+ T + + S +SE+E
Sbjct: 1617 SDNGSPENVVVETPSIVSQTPREPEPFTISEQSSESE 1653
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 31.9 bits (69), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 262 AAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYSYHKEWEKHDTKXTENPLPKNSE 441
A+ SS NS + +N+ PNI +G ++ S HK +K D+K P P
Sbjct: 451 ASTSSSSKNSSS--INSPKTPNI---SGSSRRSRSRAKRHKALQKRDSKTNRTPSPDRQS 505
Query: 442 LYEDSQ 459
+D++
Sbjct: 506 CKKDAR 511
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 31.9 bits (69), Expect = 0.23
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 262 AAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYSYHKEWEKHDTKXTENPLPKNSE 441
A+ SS NS + +N+ PNI +G ++ S HK +K D+K P P
Sbjct: 451 ASTSSSSKNSSS--INSPKTPNI---SGSSRRSRSRAKRHKALQKRDSKTNRTPSPDRQS 505
Query: 442 LYEDSQ 459
+D++
Sbjct: 506 CKKDAR 511
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 30.7 bits (66), Expect = 0.53
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Frame = +1
Query: 52 GQEASGYYSQS-----GSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVR--VIIRPGT 210
G +S Y +++ G+ S ++SN N SS Y + Q ++PV+ I P
Sbjct: 126 GHSSSSYTTETRVTGGGTGAPVSNNYSNQNYSSSAYNSQSSQHQTKSIPVQNYQISFPPL 185
Query: 211 KVHVP-IATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYE--SAYSYH 381
V P T +Q ++ +SS ++ + ++ P A H+ S Y
Sbjct: 186 SVSTPAFGTSFFENSQ--KSFQESSEKFHRDLASPLSRTI---PVQSAGHFSEVSKYFNS 240
Query: 382 KEWEKHDTKXTENPLPKNSELYEDS 456
+E E + PLP ++YE S
Sbjct: 241 EEEENYQVSQPAIPLPSADQVYEVS 265
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 30.7 bits (66), Expect = 0.53
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Frame = +1
Query: 52 GQEASGYYSQS-----GSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVR--VIIRPGT 210
G +S Y +++ G+ S ++SN N SS Y + Q ++PV+ I P
Sbjct: 710 GHSSSSYTTETRVTGGGTGAPVSNNYSNQNYSSSAYNSQSSQHQTKSIPVQNYQISFPPL 769
Query: 211 KVHVP-IATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYE--SAYSYH 381
V P T +Q ++ +SS ++ + ++ P A H+ S Y
Sbjct: 770 SVSTPAFGTSFFENSQ--KSFQESSEKFHRDLASPLSRTI---PVQSAGHFSEVSKYFNS 824
Query: 382 KEWEKHDTKXTENPLPKNSELYEDS 456
+E E + PLP ++YE S
Sbjct: 825 EEEENYQVSQPAIPLPSADQVYEVS 849
>X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 500
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 52 GQEASGYYSQSGSHRQSSYDHSNTNS 129
G ASG S +G H +SSY +S++N+
Sbjct: 475 GYHASGDISAAGRHHESSYSYSSSNN 500
>AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate
filament, c protein 1 protein.
Length = 500
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 52 GQEASGYYSQSGSHRQSSYDHSNTNS 129
G ASG S +G H +SSY +S++N+
Sbjct: 475 GYHASGDISAAGRHHESSYSYSSSNN 500
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/90 (21%), Positives = 42/90 (46%)
Frame = +1
Query: 52 GQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIA 231
G+ S S+SGSH + HS+ + HS A+ S + + ++ V +A
Sbjct: 133 GKAPSVASSRSGSHHSVASHHSHHSQHSHHSALTHDSE--STISEGTLVNEPIVVGAHVA 190
Query: 232 TQSLNTAQTGAAYDQSSVNSEAEILNNQNQ 321
+++ G +++ +V + + L+ ++Q
Sbjct: 191 SEAPTPLAVGQSFEHDAVIEQFKNLHGRDQ 220
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/90 (21%), Positives = 42/90 (46%)
Frame = +1
Query: 52 GQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIA 231
G+ S S+SGSH + HS+ + HS A+ S + + ++ V +A
Sbjct: 133 GKAPSVASSRSGSHHSVASHHSHHSQHSHHSALTHDSE--STISEGTLVNEPIVVGAHVA 190
Query: 232 TQSLNTAQTGAAYDQSSVNSEAEILNNQNQ 321
+++ G +++ +V + + L+ ++Q
Sbjct: 191 SEAPTPLAVGQSFEHDAVIEQFKNLHGRDQ 220
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/90 (21%), Positives = 42/90 (46%)
Frame = +1
Query: 52 GQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIA 231
G+ S S+SGSH + HS+ + HS A+ S + + ++ V +A
Sbjct: 133 GKAPSVASSRSGSHHSVASHHSHHSQHSHHSALTHDSE--STISEGTLVNEPIVVGAHVA 190
Query: 232 TQSLNTAQTGAAYDQSSVNSEAEILNNQNQ 321
+++ G +++ +V + + L+ ++Q
Sbjct: 191 SEAPTPLAVGQSFEHDAVIEQFKNLHGRDQ 220
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 49 GGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQ 168
G + S + SQ S+Y H NT H SDY+ Q
Sbjct: 815 GRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTGYNGEQ 854
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 49 GGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQ 168
G + S + SQ S+Y H NT H SDY+ Q
Sbjct: 815 GRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTGYNGEQ 854
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 49 GGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQ 168
G + S + SQ S+Y H NT H SDY+ Q
Sbjct: 815 GRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTGYNGEQ 854
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.1 bits (62), Expect = 1.6
Identities = 26/111 (23%), Positives = 52/111 (46%)
Frame = +1
Query: 70 YYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLNT 249
++ ++ S SS S+++S SS + + + V G K H A+ S ++
Sbjct: 286 HHKKAASSSSSSSSSSSSSSSSSSSSSSESEDEKKKKKVHHKKSHGKKHHKKAASSSSSS 345
Query: 250 AQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYSYHKEWEKHD 402
+ + ++ SS +SE+E ++ P + +H + A+ HKE E H+
Sbjct: 346 SSSSSSSSSSS-SSESED-EKKHAPAHH---EHHEHKDGAHHEHKEGEHHE 391
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 70 YYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVII 198
+Y + + + H+ H +D A+N Q ++ PV VII
Sbjct: 115 FYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVII 157
>AF125446-2|AAD12805.1| 379|Caenorhabditis elegans Hypothetical
protein R05C11.2 protein.
Length = 379
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 341 LGKLSTTNQRTVTTRNGKNMIQXLQRI 421
LG+L + VTTRN K ++Q LQ +
Sbjct: 185 LGRLLPVEKLVVTTRNQKTIVQLLQSV 211
>AF099914-9|AAC68759.2| 273|Caenorhabditis elegans Math
(meprin-associated traf homology)domain containing
protein 18 protein.
Length = 273
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 129 TFK*LCSKHSEQTNYCNAS*SYNTPW 206
TFK + S + Y N YNTPW
Sbjct: 13 TFKNISSLKENENRYSNVERRYNTPW 38
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 27.5 bits (58), Expect = 4.9
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Frame = +1
Query: 76 SQSGSHRQSSYDH---SNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLN 246
S S +R++ D+ S N S N + Q P V R T P A Q N
Sbjct: 2 SSSEDNRRTKKDYKKRSKQNRERSRRYSNCKKPQPLNKPSPVRDRSRT----PKAPQ-FN 56
Query: 247 TAQTGAAYDQSSVNSEAEILNNQNQPNIY*PTGQAKHYE--SAYSYHKEWEKH-DTKXTE 417
Q A+D +E EI N+++Q N Y +++ E +A++ H+ K +
Sbjct: 57 CRQCRKAFDSIRELAEHEIKNHEDQFNCYHCDKKSESIERLAAHTAHRHGPKPVICAYCQ 116
Query: 418 NPLPKNSELYED 453
P K+SEL D
Sbjct: 117 EPFGKSSELMSD 128
>U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical
protein C53B7.3 protein.
Length = 243
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 144 CSKHSEQTNYCNAS*SYNTPWNKSACTNRYSKS*YSTNWC 263
C + Q++Y N + N+ ++ S T RYS YS C
Sbjct: 101 CMNNRCQSSYSNNMYNSNSQYSNSGSTCRYSTDCYSGQMC 140
>U42841-11|AAP31429.1| 394|Caenorhabditis elegans Gex interacting
protein protein16, isoform l protein.
Length = 394
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 91 HRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIR 201
H SS HS H+ Y Q +++P R IIR
Sbjct: 63 HHSSSRHHSGWEGHTGGYQEYRQGAITSSLPRRQIIR 99
>U42841-10|AAM97954.1| 380|Caenorhabditis elegans Gex interacting
protein protein16, isoform f protein.
Length = 380
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 91 HRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIR 201
H SS HS H+ Y Q +++P R IIR
Sbjct: 63 HHSSSRHHSGWEGHTGGYQEYRQGAITSSLPRRQIIR 99
>U42841-8|AAM97953.1| 476|Caenorhabditis elegans Gex interacting
protein protein16, isoform e protein.
Length = 476
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 91 HRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIR 201
H SS HS H+ Y Q +++P R IIR
Sbjct: 159 HHSSSRHHSGWEGHTGGYQEYRQGAITSSLPRRQIIR 195
>U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting
protein protein16, isoform i protein.
Length = 447
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 91 HRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIR 201
H SS HS H+ Y Q +++P R IIR
Sbjct: 130 HHSSSRHHSGWEGHTGGYQEYRQGAITSSLPRRQIIR 166
>U42841-6|AAM97956.1| 404|Caenorhabditis elegans Gex interacting
protein protein16, isoform h protein.
Length = 404
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 91 HRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIR 201
H SS HS H+ Y Q +++P R IIR
Sbjct: 87 HHSSSRHHSGWEGHTGGYQEYRQGAITSSLPRRQIIR 123
>U39646-8|AAA80372.2| 336|Caenorhabditis elegans Hypothetical
protein F47B7.7 protein.
Length = 336
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 22 TRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVR 189
T+ +K DY +GY H + YD S S SDYA ++ S Q + +P R
Sbjct: 253 TKNIKG-DYVPYRTTGY---GAYHVKRQYDLS-PRSMGSDYATSSGSEQSSPIPAR 303
>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
ligase protein 1,isoform a protein.
Length = 1051
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 274 QSSVNSEAEILNNQNQPNIY*PTGQAKHYESAYSYHKEWEKHDTKXTENP 423
++S N +I N+ P Y P + A S H E D+K +P
Sbjct: 340 ETSDNLNDKITNSDRTPTPYPPADSERPISEASSCHSESPPRDSKPPRSP 389
>L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of
potassium channelsprotein 7 protein.
Length = 557
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 19 STRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDY 144
S+RG +R D G S + G + + H N + ++S Y
Sbjct: 4 SSRGYQRVDSSGDGGSLLMEEEGDNPHEALLHRNNDDYASTY 45
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +1
Query: 19 STRGVKRYDYGGQEASG---YYSQSGS--HRQSSYDHSNTNSHSSDY 144
S R + +Y Q +SG Y+ +G R SY H++ +S++ DY
Sbjct: 205 SFRAPRNPNYDRQNSSGRDDYHHGNGGPLQRSGSYQHNHNHSNTKDY 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.122 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,518,386
Number of Sequences: 27780
Number of extensions: 173490
Number of successful extensions: 556
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -