Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G08
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    24   1.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.9  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 416 RAFNFFLTRSVTVHISPTPSIVLPFVSELIKKCQTMDF 303
           +AF      SVTV  +P PS  +P +++++     M +
Sbjct: 165 QAFGSKYVLSVTVSANPLPSYDIPEINKVVDFINIMSY 202


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -3

Query: 398 LTRSVTVHISPTPSIVLPFV 339
           ++RSV++ +S  P +V+PF+
Sbjct: 550 VSRSVSMALSIGPPLVIPFL 569


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -3

Query: 398 LTRSVTVHISPTPSIVLPFV 339
           ++RSV++ +S  P +V+PF+
Sbjct: 550 VSRSVSMALSIGPPLVIPFL 569


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 392 RSVTVHISPTPSIVLPFVSELIKKCQTM 309
           +S  V +  T +I L FVS  I  CQT+
Sbjct: 176 KSSLVQLILTQAIFLMFVSYNIYVCQTV 203


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 392 RSVTVHISPTPSIVLPFVSELIKKCQTM 309
           +S  V +  T +I L FVS  I  CQT+
Sbjct: 102 KSSLVQLILTQAIFLMFVSYNIYVCQTV 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,768
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)