Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G08
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 29 0.46
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 29 0.61
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 28 1.1
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 27 1.9
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 27 1.9
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 3.3
SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.3
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 25 7.5
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 25 7.5
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 25 9.9
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 9.9
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 29.5 bits (63), Expect = 0.46
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 671 QNVVHWGLCDAIYXWNILPMCLLSSFSYFYIPKEF 567
+N+ +W I +LP+C F Y+++P F
Sbjct: 1099 ENITNWCSESGIKSLELLPVCCFLRFMYYFLPTVF 1133
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 29.1 bits (62), Expect = 0.61
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 279 SPKQINTDEVHRLTFFDQLRNERQDDRWSWGYVNS---NGSGQEKIKSTTTARTTNAVIY 449
SPK + L+ D ++ ++ + GY+++ NGS Q K + +T N++
Sbjct: 355 SPKSKRVKTLENLSIMDFVQPKQMFGKEPEGYLSNQSNNGSAQNKKSGDNSEKTKNSLKS 414
Query: 450 KSGDSSNT 473
S S+NT
Sbjct: 415 SSKKSANT 422
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 351 DDRWSWGYVNSNGSGQEKIKSTTTARTTNAVIYKSGDSSNTTEDVNPCSPFI-PPPARGF 527
DD W +G + S I T+T+ TT A S+ T V P S + PP+
Sbjct: 318 DDGWEFGTIKQGQSNVSSITGTSTSTTTAAT-----SSTTVTGTVIPKSSTVHEPPSSND 372
Query: 528 SAP 536
S P
Sbjct: 373 SHP 375
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 354 DRWSWGYVNSNGSGQEKIK-STTTARTTNAVIYKSGDSSNTTEDVNPCSPFIPPPARGFS 530
D +S VNS+G Q + S R N + + NT +NP S + +
Sbjct: 1331 DDFSCVMVNSDGGLQMLVPISDRVYRRLNIIQNYLANRVNTIGGLNPKSYRLITSPSNLT 1390
Query: 531 APGRRISEVKCYEFLWNIKVRERGK*THRQNVP 629
P RRI + ++ + V R + H+ VP
Sbjct: 1391 NPTRRILDGMLIDYFTYMSVAHRHEMAHKCGVP 1423
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.5 bits (58), Expect = 1.9
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = -3
Query: 461 ISTFIYYSVSCPGCCRAFNFFL----TRSVTVHISPTPSIVLPFVSELIKKCQTMDFVCI 294
IS F+ +++ PG + ++ + +R + IS P + + ++IKKC ++F+CI
Sbjct: 129 ISEFLRWALMPPGYVKEWHVGVRVKSSRKLVAFISAVP-LSIRVRDKIIKKCAEVNFLCI 187
Query: 293 DLFR*HRATRRKKPSKNQIK 234
H+ R K+ + IK
Sbjct: 188 -----HKKLRSKRLTPLLIK 202
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 375 VNSNGSGQEKIKSTTTARTTNAVIYKSGDSSNTTEDVNPCSPFIPP-PARGFSAPGRRIS 551
V+ N + + KST + + K S+ T + P F PP A+ AP +R
Sbjct: 415 VSVNAPAETQDKSTVVPQESATATPKRSPSATPTSALPPIGKFAPPTTAKAQPAPEKRRG 474
Query: 552 E 554
E
Sbjct: 475 E 475
>SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 459 DSSNTTEDVNPCSPFIPPPARGFSAPGRRISEVKCYEFLWN 581
D T D N CSPF P + S RR +WN
Sbjct: 29 DGMKKTSDENGCSPFTLKPIKSTSDRKRRRHSRMSIVNVWN 69
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 387 GSGQEKIKSTTTARTTNAVIYKSG---DSSNTTEDVNPCSPFIPPP 515
G+ Q S +T++ + V Y G +S+NTT+ +N + F PPP
Sbjct: 103 GTSQYPSASFSTSQHPSQV-YNDGSTLNSNNTTQQLNNNNGFQPPP 147
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 354 DRWSWGY-VNSNGSGQEKIKSTTTARTTNAVIYKSGDSSNTTEDVNPCSPFIPPPARGFS 530
D W W + +SN G S ++ T+ + S NT+ +P S P+R +
Sbjct: 106 DGWPWHHNSSSNPQGYAWTPSLLSSNATSYLHSGSSPHGNTSNHPSPISSLESLPSRSST 165
Query: 531 APG 539
G
Sbjct: 166 GSG 168
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 273 TVSPKQINTDEVHRLTFFDQLRNERQDDRWSWG 371
TVS K+ N D V RL D R E +W+ G
Sbjct: 96 TVSEKEENKDAVTRLDSQDVKRFEETYSQWNSG 128
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 375 VNSNGSGQEKIKST----TTARTTNAVIYKSGDSSNTTEDVNPCSPFIPPPARGFSAPGR 542
V+ +GS I ST T + TT+ + S SS+ + S PP+ G S +
Sbjct: 596 VSESGSSSASITSTYPSSTLSMTTSHLSSSSVHSSSAHSSSSRSSSMSLPPSAGSSTSLQ 655
Query: 543 RIS 551
RIS
Sbjct: 656 RIS 658
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,408,960
Number of Sequences: 5004
Number of extensions: 46493
Number of successful extensions: 137
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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