Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G07
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.43 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 91  FDLNSSIYYNNWGSKC*YRLVSIKHFSRVSQV 186
           F LN  ++ NN   +C YR + +   S++SQV
Sbjct: 148 FFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQV 179


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 193 GVPTLEVYAPTLVYRRMPVWTIGQ 264
           GVPTLE        R  PVW  G+
Sbjct: 205 GVPTLEELGFDTEGRLPPVWQGGE 228


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 216 IHLQCWNTVANL 181
           +HL CWN+  ++
Sbjct: 367 VHLGCWNSTPSI 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,176
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)