Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G06
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   1.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    20   7.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    20   9.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    20   9.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    20   9.8  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 161 SCLCCVSSGEQ 129
           SC+CC  SGE+
Sbjct: 86  SCMCCQESGER 96


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -2

Query: 184 PYFAAPTLVACAV*VPENNFDFSPNSITMFPTIFRSAFV 68
           PY A P   +    +  N  D  P S   FPT F +  V
Sbjct: 397 PYLALPKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIV 435


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -2

Query: 184 PYFAAPTLVACAV*VPENNFDFSPNSITMFPTIFRSAFV 68
           PY A P   +    +  N  D  P S   FPT F +  V
Sbjct: 289 PYLALPKTDSSDNRILNNLLDKKPYSTYKFPTNFDALIV 327


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 182 ILCSSYASCLCCVS 141
           ILC  YA+C+  VS
Sbjct: 6   ILCLVYATCVYSVS 19


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 104 YRIRREIKIVLRNLHSTSN 160
           Y I REI  +L+N   T N
Sbjct: 22  YLILREIDTILKNDQMTRN 40


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  KDQISCIEDKG*PKYCR 94
           KD+ SCI DK     CR
Sbjct: 77  KDEGSCIIDKTHRNQCR 93


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  KDQISCIEDKG*PKYCR 94
           KD+ SCI DK     CR
Sbjct: 77  KDEGSCIIDKTHRNQCR 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,240
Number of Sequences: 336
Number of extensions: 1748
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)