Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G06
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    28   2.6  
U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    27   3.5  
AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical ...    27   4.6  
AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical ...    27   6.1  
U55370-2|AAA97994.1|  561|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AL132865-19|CAJ76951.1|  220|Caenorhabditis elegans Hypothetical...    26   8.1  

>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
            ZK945.9 protein.
          Length = 3178

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 84   NIVGNIVIELGEKSKLFSGTYTAQATSVGAAKYGYDLKMDSTGVL 218
            NI  N+  +L         T  A+A + G   Y Y   +D TG++
Sbjct: 1788 NIAKNLANQLASTLDTLENTLAARAIATGNLPYDYSNSVDGTGMV 1832


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
            protein ZK945.9 protein.
          Length = 3178

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 84   NIVGNIVIELGEKSKLFSGTYTAQATSVGAAKYGYDLKMDSTGVL 218
            NI  N+  +L         T  A+A + G   Y Y   +D TG++
Sbjct: 1788 NIAKNLANQLASTLDTLENTLAARAIATGNLPYDYSNSVDGTGMV 1832


>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -1

Query: 251 TVYYLWANFKMQYTGGVHL*IISILCSSYASCLCCVSSGEQF*FLA*FYN 102
           T +  W N+K+  T  +   +++I+C + A+ L     G+Q   +  F+N
Sbjct: 97  TTFTFWLNYKLHETSTLGYHVVNIICHTVAT-LVFYKLGKQLEHIFDFFN 145


>AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical
           protein R08F11.7 protein.
          Length = 773

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 75  ADLNIVGNIVIELGEKSKLFSGTYTAQATSVGAAKYGYDLKMDSTGVL 218
           AD  IV + +     K   F+G     AT +   KYG D+  D+  VL
Sbjct: 52  ADGAIVSSQIANAESKQLQFTGDVLEIATQILVKKYGVDILEDANEVL 99


>AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical
           protein B0524.4 protein.
          Length = 772

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = +3

Query: 57  VVLKTKADLNIVGNIVI-ELGEK-SKLFSGTYTAQATSVGAAKYGYDLKMDSTGVLHFEV 230
           ++   + DL I+GN+ I    EK S  F+   T + +     K+   LK +  G+  F+ 
Sbjct: 436 IISPLEGDLKILGNVEIASSAEKISTKFNSFNTFKQSLPAIFKFTSGLK-NIQGIELFK- 493

Query: 231 GPEIINCENINDIKVQLDSELENALRRDPDAK 326
            P I     I D +V   SEL + ++R PD +
Sbjct: 494 -PAI---SAIRDFRVYSKSELSDVIKRLPDVQ 521


>U55370-2|AAA97994.1|  561|Caenorhabditis elegans Hypothetical
           protein K03B4.6 protein.
          Length = 561

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 189 DLKMDSTGVLHFEVGPEIINCEN 257
           D K++ TG+   ++G E+I CE+
Sbjct: 447 DKKVEDTGLFMIQLGRELIECES 469


>AL132865-19|CAJ76951.1|  220|Caenorhabditis elegans Hypothetical
           protein Y62E10A.20 protein.
          Length = 220

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 252 ENINDIKVQLDSELENALRRDPD 320
           EN+ + +  L  +LENALR  PD
Sbjct: 111 ENMREARKGLSKQLENALRFSPD 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,424,031
Number of Sequences: 27780
Number of extensions: 158576
Number of successful extensions: 398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)