Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G05
(603 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.032
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 32 0.056
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 29 0.40
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 29 0.52
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 29 0.52
SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p... 29 0.69
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.69
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 0.91
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 28 0.91
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 28 1.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.2
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.2
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 27 1.6
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 27 1.6
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 25 2.2
SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|c... 27 2.8
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.7
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 3.7
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.7
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 6.4
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 25 6.4
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 6.4
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 25 8.5
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.032
Identities = 29/141 (20%), Positives = 58/141 (41%)
Frame = +2
Query: 167 TQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVENTQEL 346
++SS+ + + S+SDS+S + SS+NS + D S + ++++
Sbjct: 245 SESSSEDSDSSSSSSDSESES-----SSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDS 299
Query: 347 DSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVI 526
DST D G + + S+TNS SS+ + + + + + + +
Sbjct: 300 DSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSL 359
Query: 527 IRPGTKVHVPIATQSLNTAQT 589
R +T+S T +T
Sbjct: 360 KRKHEDDESSTSTKSSRTTKT 380
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 32.3 bits (70), Expect = 0.056
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +2
Query: 155 MQAITQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVEN 334
+ ++ SSA S+ + S+S S+S S + SS+ S HT S+ +S +G +
Sbjct: 519 LSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSHTITSTSQSVHTSGSSTS 578
Query: 335 TQELDSTRGVKRYDYGGQEASGYYSQSGSHRQS 433
T + T +S S + + R S
Sbjct: 579 TSSVAVTSTAYSSSSSSSSSSSIESSANAVRVS 611
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 29.5 bits (63), Expect = 0.40
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Frame = +2
Query: 185 SNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVEN----TQEL-D 349
S G+ + +Q S YN + +SS N YDS+ + Q E+ T ++ D
Sbjct: 30 STNGSVNIEGTQDSN-DLQYNAHLFKSS-NPKEEYDSAIDVRNDISQDEDDYKRTNDVND 87
Query: 350 STRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVII 529
S R V++Y+ + + Y +S Q SDY RQ+T V
Sbjct: 88 SYRLVRQYEAPKELLNEYADESYDPMQERQSKKQIQDRESDYQKQRYDRQLTPTRVDAFQ 147
Query: 530 RPGTK 544
GT+
Sbjct: 148 PDGTQ 152
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 29.1 bits (62), Expect = 0.52
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 556 WYMHFCSRAYYNSNWHCSNLSALSVY 479
W+ CS + + WH LS +S Y
Sbjct: 195 WFATICSETHIENEWHVGPLSVVSAY 220
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 29.1 bits (62), Expect = 0.52
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 236 SGYNGYSGQSSTNSGHTYDSSGRSQGYT-GQVENTQELDSTRGVKRYDYG--GQEASGYY 406
SGY S S TNSGHT +++ RS + G V+ S Y++ QE +
Sbjct: 372 SGYTCVSSSSVTNSGHTENNTWRSDEQSKGFVDINSFSQSLFSNGNYEFAAHSQELDDLF 431
Query: 407 SQ 412
SQ
Sbjct: 432 SQ 433
>SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 28.7 bits (61), Expect = 0.69
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Frame = +2
Query: 167 TQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYD----SSGRSQGYTGQVEN 334
T S L + ASD++ +RY + +S S G YD S + Y +
Sbjct: 185 TSRSTLDRKRFHDASDTERNRYGRSPSPHSRFSEKPRGERYDIRSYSRSHKERYEDRYRP 244
Query: 335 TQELD---STRGVKRYDYGGQEASGYYSQS-GSHRQS-SYDHSNTNSHS 466
T+ + TR + +D G+ G + +S S+R+ YD +S S
Sbjct: 245 TRRRERHYRTRDDEGFDEFGRSRDGRWRESRTSYREKHRYDRDALSSES 293
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 0.69
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 167 TQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRS 307
+ SS+ S+ + S+S S SS S + SST+S H+ SS S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSS 226
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 28.3 bits (60), Expect = 0.91
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 188 NGGTYSASDSQSSRYHSGYNGYSGQSSTN 274
N +Y SDSQ S +H G N GQ N
Sbjct: 264 NKHSYKKSDSQQSFHHKGRNTRKGQRHNN 292
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 167 TQSSALSNGGTYSASDSQSSR-YHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVENTQE 343
T SSA ++ DS S +HS +G++ + H+Y S Q + + NT++
Sbjct: 227 TVSSANGKEVPQTSEDSSSQAPHHSSSSGHAPSQQGGNKHSYKKSDSQQSFHHKGRNTRK 286
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 28.3 bits (60), Expect = 0.91
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 10/120 (8%)
Frame = +2
Query: 167 TQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVENTQEL 346
T S + +YS++ + S +G + + SG +Y + T +Q
Sbjct: 100 TSYSRRHDDSSYSSNKYSTGGNDSYSSGGRNEDYSTSGGSYTTDPSRTDDTASYGQSQYN 159
Query: 347 DSTRGVKRYDYGGQEASGYYSQSGSHRQ----------SSYDHSNTNSHSSDYAVNTQSR 496
S + + DYG + Y + + RQ +YD+S++ SH+ + T+ R
Sbjct: 160 QSRKTTQGGDYGEDYSQSYPTDTYGSRQKATPSDTVGGGAYDYSSSGSHTHGGSHGTEHR 219
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -2
Query: 257 LNIRCIHCDILSFENHWRCKFRRYLMQTIVL*PA*DDKEDW--DCESSKETPS 105
L + + D +F N F +YL++ + L A DK DW C+ SK P+
Sbjct: 665 LILSSMSADTSNFSNQELVDFDKYLVELLFLSFAFKDKFDWIRFCQVSKRDPA 717
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 1.2
Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Frame = +2
Query: 185 SNGGTYSASDSQS---SRYHS----GYNGYS---GQSSTNSGHTYDSSGRSQGYTGQVEN 334
S+ G YS+S S S HS G+ G S G S + SSG G+ G N
Sbjct: 866 SSRGMYSSSRQSSRSGSNTHSHAGPGFGGPSERKGISRLGIDRGFSSSGA--GF-GSGSN 922
Query: 335 TQELDSTRGVKRYDYGGQEASGYYSQSGSHR 427
+ S RGV + +GG S SQ GS R
Sbjct: 923 YKSAPS-RGVSHHGHGGMSGSHRGSQRGSRR 952
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 245 NGYSGQSSTNSGHTYDSSGRSQGYTGQVENTQELDSTRGVKRY 373
N +GQ+ST++GH SS Y N++ + S+ Y
Sbjct: 25 NSSNGQTSTSAGHPSSSSSTLPNYAASSLNSRPVSSSGSGNAY 67
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/104 (20%), Positives = 36/104 (34%)
Frame = +2
Query: 44 KVGFTGRVIMI*VTSKVAISKKAFLLMTRNPNLLYHLMQAITQSSALSNGGTYSASDSQS 223
+ G TG+ + + I+K+ L+ + A+ + S+ G +
Sbjct: 523 RAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAMARESSFGGNGRGGRYSGRG 582
Query: 224 SRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVENTQELDST 355
R + Y + TNS Y S GY G T +T
Sbjct: 583 GRGGNAYGARDFRRPTNSSSGYSSGPSYSGYGGFESRTPHHGNT 626
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +2
Query: 80 VTSKVAISKKAFLLMTRNPNLLYHLMQAITQSSALSNGGTYSASDSQSSRYHSGYNGYSG 259
+T ++A+S FL ++L L + + AL SA+ + G GY G
Sbjct: 251 ITPRLALSASEFLAYQTEKHVLTILTDMTSYADALRE---VSAAREEVP----GRRGYPG 303
Query: 260 QSSTNSGHTYDSSGRSQGYTGQV 328
T+ Y+ +GR +G G +
Sbjct: 304 YMYTDLSTIYERAGRVEGRNGSI 326
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 24.6 bits (51), Expect(2) = 2.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 185 SNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSS 298
S T S SDS SS S + S SST+ + D S
Sbjct: 257 SKNSTPSESDSSSSESSSSVSDSSDLSSTSDSSSGDES 294
Score = 20.6 bits (41), Expect(2) = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 389 EASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNT 487
++S S + RQSS D ++N+ S ++NT
Sbjct: 287 DSSSGDESSDTARQSSSDTISSNNVSVSVSLNT 319
>SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|chr
2|||Manual
Length = 812
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 343 IRQHTWSKTIRLWWTRSQWLLLSI 414
I Q WSK R+W W +LSI
Sbjct: 80 IDQSRWSKLWRIWNVGYSWFILSI 103
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 3.7
Identities = 27/91 (29%), Positives = 39/91 (42%)
Frame = +2
Query: 194 GTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQGYTGQVENTQELDSTRGVKRY 373
G +S+ + + Y S Y QSS+NS T +S+G G G V T +T +
Sbjct: 113 GVFSSLANSVTGYASNYT----QSSSNSTSTMNSTGSVSG--GSVYPTN--STTNSSISW 164
Query: 374 DYGGQEASGYYSQSGSHRQSSYDHSNTNSHS 466
+ A+ S S S QSS N+ S
Sbjct: 165 NSSTSAATNTSSSSSSSSQSSVVSVNSEIFS 195
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 449 YCDHMNFAYENLIESNSHWLLV 384
+C +NFA ENL+ +N L+V
Sbjct: 1837 HCSSLNFAKENLLRTNVKLLIV 1858
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 134 PNLLYHLMQAITQSSALSNGGTYSA-SDSQSSRYHSGYNGYSGQSSTNSGHTYDSSGRSQ 310
P Y + Q + L T S +D +S+ Y GY+ GQS T + G S
Sbjct: 165 PRDAYVVKQLREAGAVLFGHATLSEWADMRSNDYSEGYSARGGQSRCPFNLTVNPGGSSS 224
Query: 311 G 313
G
Sbjct: 225 G 225
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 413 SGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVH 550
SG+ R +YD N SHS + V I + + I P K H
Sbjct: 1275 SGNLRLLAYDPENPESHSGERLVTRGDFHIGNVITAMTILPKEKKH 1320
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 146 YHLMQAITQSSALSNGGTYSAS--DSQSSRYHSGYNGYSGQSSTNSGHTYDSSGR 304
Y + A Q+ +N G++SAS +Q R S NG +++ SG +S +
Sbjct: 177 YPKLHAALQAQLANNSGSFSASWLQAQQQRLVSAGNGRETVNASASGAVNPTSSQ 231
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 6.4
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Frame = +2
Query: 167 TQSSALSNGGTYSASDSQSSRYHSGYNGYSGQSSTNSGHTYDSSG-RSQGYTGQVEN--T 337
+ S +NG + +S G ++++ SG+T+ SS + T
Sbjct: 57 SSKSGKTNGSKAAVESGLASGAFGNRTGNMNRNTSMSGYTFGSSNFVPYNLLSNTPSFTT 116
Query: 338 QELDSTRGVKRYDYGGQEASGYYSQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPV 517
ST V GG + S + S + +NS +S ++ + + +P+
Sbjct: 117 SHSSSTTFVPPATMGGGLNNLSSPSSSLYLPGSASYQRSNSKNSSASILQMNTTLDDIPI 176
Query: 518 RVIIRPGTKVHVP 556
++ RPG + P
Sbjct: 177 -LLRRPGLSSYTP 188
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 25.0 bits (52), Expect = 8.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 326 VENTQELDSTRGVKRYD-YGGQEASGYYSQSGSHRQSSYDHSNTNSHSS 469
VE +Q D YD EAS Y S R SS HS + S SS
Sbjct: 200 VECSQSEDFAEDENLYDELNLDEASASYDAERSGRSSSSSHSPSPSASS 248
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,260,221
Number of Sequences: 5004
Number of extensions: 42123
Number of successful extensions: 166
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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