Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_G04
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   7.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 230 SIHSRTRTTAPKSPQSLSRETV 295
           S+H+ +   +P+SP+S SR +V
Sbjct: 313 SVHNGSNNGSPRSPESNSRCSV 334


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 275 TEETSEPSCAFANVLKHLLETVSHSFTEP 189
           TEE  E  C F   L +L+ + + SF  P
Sbjct: 190 TEEVPEDKCPFTEHLGYLIFSSTISFYLP 218


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 22/96 (22%), Positives = 37/96 (38%)
 Frame = +2

Query: 89  NVSSALYHRTIIRDKSILLNSRRTVSISRAVALTVP*NYGTLSPIGVSIHSRTRTTAPKS 268
           N+S+ +Y      D S      +  S + A +  +P      SPI     +R       +
Sbjct: 634 NISTTIYENQNCLDASSSRRGSKIGSPTPAESTFIPEERRIYSPITFQDVARRSVANSPT 693

Query: 269 PQSLSRETVSISLHRDWTRQ*SYGSWLVADVSYNIQ 376
             + SRE  S S+    TR     S L++D   + +
Sbjct: 694 KNADSREYRSNSMGAVMTRNSEMFSSLLSDTEQHFR 729


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 425 TTRKITFCSRMRQRRLFVLGTLEALVDA 508
           T  + TFC +MR+    +    ++LV+A
Sbjct: 3   TNNQDTFCKKMRKATKEIHSISDSLVNA 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,750
Number of Sequences: 438
Number of extensions: 3378
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)