Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_G04
(531 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 149 2e-36
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 149 2e-36
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 84 5e-17
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 75 2e-14
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 73 9e-14
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 73 1e-13
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 71 5e-13
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 71 6e-13
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 68 5e-12
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 68 5e-12
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 63 1e-10
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 61 5e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 59 2e-09
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 57 6e-09
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 57 6e-09
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 57 6e-09
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 57 6e-09
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 57 6e-09
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 57 9e-09
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 57 9e-09
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 56 1e-08
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 56 1e-08
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 56 1e-08
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 56 1e-08
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 56 2e-08
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 56 2e-08
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 56 2e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 56 2e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 56 2e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 55 3e-08
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 55 3e-08
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 54 5e-08
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 54 5e-08
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 54 5e-08
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 54 8e-08
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 54 8e-08
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 54 8e-08
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 52 2e-07
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 51 4e-07
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 51 4e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 51 4e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 51 4e-07
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 51 4e-07
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 51 4e-07
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 50 1e-06
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 50 1e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 50 1e-06
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 50 1e-06
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 44 1e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 49 2e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 49 2e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 49 2e-06
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 48 3e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 48 3e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 48 3e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 48 3e-06
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 48 4e-06
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 48 4e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 47 7e-06
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 47 7e-06
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 47 9e-06
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 47 9e-06
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 46 2e-05
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 46 2e-05
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 46 2e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 46 2e-05
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 46 2e-05
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 46 2e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 45 3e-05
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 45 3e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 45 3e-05
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 45 4e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 45 4e-05
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 45 4e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 45 4e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 44 5e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 44 5e-05
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 44 5e-05
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 44 5e-05
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 44 5e-05
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 44 5e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 44 5e-05
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 44 5e-05
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 44 5e-05
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 44 5e-05
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 44 6e-05
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 43 1e-04
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 43 1e-04
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 43 1e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 42 3e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 42 3e-04
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 42 3e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 42 3e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 42 3e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 41 5e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 41 5e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 41 5e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 41 5e-04
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 41 5e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 41 5e-04
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 41 6e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 41 6e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 41 6e-04
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 41 6e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 41 6e-04
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 41 6e-04
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 40 8e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 40 8e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 40 8e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 40 8e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 40 0.001
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 40 0.001
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 40 0.001
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 40 0.001
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 40 0.001
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 40 0.001
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 40 0.001
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 40 0.001
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 40 0.001
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 40 0.001
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 39 0.002
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.002
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 39 0.002
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 39 0.002
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 39 0.002
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 39 0.002
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 39 0.002
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 39 0.002
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 39 0.002
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 39 0.002
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 38 0.003
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 38 0.004
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 38 0.004
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 38 0.004
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 38 0.004
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 38 0.004
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 38 0.006
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 38 0.006
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 38 0.006
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 38 0.006
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 38 0.006
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 38 0.006
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 37 0.007
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 37 0.007
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 37 0.007
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 37 0.010
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 37 0.010
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 37 0.010
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 36 0.013
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 36 0.013
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 36 0.013
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 36 0.013
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.017
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 36 0.023
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 36 0.023
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 36 0.023
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 36 0.023
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 36 0.023
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 35 0.030
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 35 0.039
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 35 0.039
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 35 0.039
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 35 0.039
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 34 0.052
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 34 0.069
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 34 0.069
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 34 0.069
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 34 0.069
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.091
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.091
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 33 0.091
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 33 0.12
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.12
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 33 0.12
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 33 0.12
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 33 0.12
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 33 0.16
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.16
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 33 0.16
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 32 0.21
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 32 0.21
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 32 0.21
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 32 0.21
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 32 0.21
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 32 0.21
At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A... 32 0.21
At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A... 32 0.21
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 32 0.21
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 32 0.21
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 32 0.21
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 32 0.21
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.28
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 32 0.28
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 32 0.28
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 32 0.28
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 31 0.37
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 0.37
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 31 0.37
At5g67090.1 68418.m08459 subtilase family protein contains simil... 31 0.48
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 31 0.48
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 31 0.48
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 31 0.48
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 31 0.48
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 31 0.48
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 31 0.64
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 31 0.64
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 31 0.64
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 31 0.64
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 30 0.85
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 30 0.85
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 30 0.85
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 30 0.85
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 30 0.85
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 30 0.85
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 30 1.1
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 30 1.1
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 30 1.1
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 30 1.1
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 30 1.1
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 30 1.1
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 29 2.0
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 29 2.0
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 2.0
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 29 2.6
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 2.6
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 2.6
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 29 2.6
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 3.4
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 3.4
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 3.4
At4g11950.1 68417.m01901 hypothetical protein 28 3.4
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 28 3.4
At3g26250.1 68416.m03275 DC1 domain-containing protein contains ... 28 3.4
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 3.4
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 28 3.4
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 4.5
At2g27900.1 68415.m03382 expressed protein 28 4.5
At1g26330.1 68414.m03211 hypothetical protein 28 4.5
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 27 6.0
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 27 6.0
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 27 6.0
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 27 7.9
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 27 7.9
At3g03620.1 68416.m00365 MATE efflux family protein similar to r... 27 7.9
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 7.9
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 149 bits (360), Expect = 2e-36
Identities = 68/176 (38%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFV-CPVPSHHHKRQVNSIKFSPNGKYFASGS 183
++FHP G+ ++A T HP+ LYDV T QCF+ P +N +++S G + + S
Sbjct: 134 ISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITAS 193
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
DG+++L+D VS +C + NAH SEV+S FT++ +++L+SG DS++KLWE+ S R +
Sbjct: 194 KDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMV 253
Query: 364 IQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHSRSASRCPLISLGHN 531
+Y GA + +QAIFN TE++V+ DEA+ + TW +R+A + HN
Sbjct: 254 KEYLGAKRVKLR---SQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHN 306
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYD---VTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
FHP +I+S I+ +D T + F +H+ V SI F P+G++ +G+
Sbjct: 92 FHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHN----VRSISFHPSGEFLLAGT 147
Query: 184 ADGSVKLWDTVSNRCF--NTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
L+D + +CF + F ++ ++ V ++ +T+ D +I+L++ S++
Sbjct: 148 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAK 207
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATT 468
C+ G + + A+F + +VL + +T
Sbjct: 208 CV---RSIGNAHGKSEVTSAVFTKDQRFVLSSGKDST 241
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW-----------DTVSNRCFNTFANAHDGSE- 264
HK V +FSP+G +FA+G AD S+KL+ DT + TF +D +E
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTF---YDHAEP 86
Query: 265 VSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
++ + F S L++S D+ IK ++ + +
Sbjct: 87 INDLDFHPRSTILISSAKDNCIKFFDFSKT 116
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 149 bits (360), Expect = 2e-36
Identities = 68/176 (38%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFV-CPVPSHHHKRQVNSIKFSPNGKYFASGS 183
++FHP G+ ++A T HP+ LYDV T QCF+ P +N +++S G + + S
Sbjct: 226 ISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITAS 285
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
DG+++L+D VS +C + NAH SEV+S FT++ +++L+SG DS++KLWE+ S R +
Sbjct: 286 KDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMV 345
Query: 364 IQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHSRSASRCPLISLGHN 531
+Y GA + +QAIFN TE++V+ DEA+ + TW +R+A + HN
Sbjct: 346 KEYLGAKRVKLR---SQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHN 398
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYD---VTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
FHP +I+S I+ +D T + F +H+ V SI F P+G++ +G+
Sbjct: 184 FHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHN----VRSISFHPSGEFLLAGT 239
Query: 184 ADGSVKLWDTVSNRCF--NTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
L+D + +CF + F ++ ++ V ++ +T+ D +I+L++ S++
Sbjct: 240 DHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAK 299
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATT 468
C+ G + + A+F + +VL + +T
Sbjct: 300 CV---RSIGNAHGKSEVTSAVFTKDQRFVLSSGKDST 333
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW-----------DTVSNRCFNTFANAHDGSE- 264
HK V +FSP+G +FA+G AD S+KL+ DT + TF +D +E
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTF---YDHAEP 178
Query: 265 VSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
++ + F S L++S D+ IK ++ + +
Sbjct: 179 INDLDFHPRSTILISSAKDNCIKFFDFSKT 208
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 84.2 bits (199), Expect = 5e-17
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCF-VCPVPSHHHKRQVNSIKFSPNGKYFASG 180
CV F+P + I++ + +R++DVTT +C V P H V ++ F+ +G S
Sbjct: 118 CVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPA----HSDPVTAVDFNRDGSLIVSS 173
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
S DG ++WD+ + C T + + VS V F+ N K++L LD++++LW ++S++
Sbjct: 174 SYDGLCRIWDSGTGHCVKTLID-DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 361 LIQYTG 378
L YTG
Sbjct: 233 LKTYTG 238
Score = 60.9 bits (141), Expect = 5e-10
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F+ G I++S+ + R++D T C + + V+ ++FSPNGK+ G+
Sbjct: 161 VDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPP--VSFVRFSPNGKFILVGTL 218
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFT-RNSKYLLTSGLDSSIKLWELASSRCL 363
D +++LW+ S + T+ + S AF+ N K +++ D+ + +WEL S + L
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Query: 364 IQYTG 378
+ G
Sbjct: 279 QKLEG 283
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/119 (24%), Positives = 55/119 (46%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
VAF I++++ ++L+DV T + H + F+P SGS
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIG---HTNYAFCVNFNPQSNMIVSGSF 133
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +V++WD + +C AH V++V F R+ +++S D ++W+ + C+
Sbjct: 134 DETVRIWDVTTGKCLKVLP-AH-SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/80 (30%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW--DTVSN---RCFNTFANAHDGSEVSSVAFT 285
H R V+S+KFS +G+ AS SAD +++ + +T+++ F +G +S VAF+
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG--ISDVAFS 80
Query: 286 RNSKYLLTSGLDSSIKLWEL 345
++++++++ D ++KLW++
Sbjct: 81 SDARFIVSASDDKTLKLWDV 100
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 75.4 bits (177), Expect = 2e-14
Identities = 41/125 (32%), Positives = 67/125 (53%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
CV F+P + I++ + IR+++V T +C V + +H ++S+ F+ +G S S
Sbjct: 133 CVNFNPPSNLIVSGSFDETIRIWEVKTGKC-VRMIKAH--SMPISSVHFNRDGSLIVSAS 189
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
DGS K+WD C T + VS F+ N K++L + LDS++KL A+ + L
Sbjct: 190 HDGSCKIWDAKEGTCLKTLID-DKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL 248
Query: 364 IQYTG 378
YTG
Sbjct: 249 KVYTG 253
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +1
Query: 31 HIIASTSHP-VIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
H S S +R++D + + C H V + F+P SGS D ++++W
Sbjct: 98 HYTCSASDDCTLRIWDARSP--YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
+ + +C AH +SSV F R+ ++++ D S K+W+ CL
Sbjct: 156 EVKTGKCVR-MIKAH-SMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCL 205
Score = 44.4 bits (100), Expect = 5e-05
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F+ G I++++ +++D C + V+ KFSPNGK+ +
Sbjct: 176 VHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK--SPAVSFAKFSPNGKFILVATL 233
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFT-RNSKYLLTSGLDSSIKLWELASSRCL 363
D ++KL + + + + + + AF+ N KY+++ D+ + LW+L + L
Sbjct: 234 DSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL 293
Query: 364 IQYTG 378
+ G
Sbjct: 294 QRLEG 298
Score = 43.6 bits (98), Expect = 8e-05
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFS-PNGKYFASGSAD 189
F P G I+ +T ++L + T + F+ H +K + FS NGKY SGS D
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGK-FLKVYTGHTNKVFCITSAFSVTNGKYIVSGSED 279
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LDSSIKLWE 342
V LWD + D V SV+ + +SG LD +I++W+
Sbjct: 280 NCVYLWDLQARNILQRLEGHTDA--VISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H ++ +KFS +G AS S D ++ LW + + + G +S +A++ +S Y
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSG--ISDLAWSSDSHY 99
Query: 301 LLTSGLDSSIKLWELASS-RCL 363
++ D ++++W+ S CL
Sbjct: 100 TCSASDDCTLRIWDARSPYECL 121
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +1
Query: 265 VSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYV 444
+S V F+ + L ++ +D ++ LW + + +Y G ++G D LA + +H Y
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG-HSSGISD-LAWSSDSH---YT 100
Query: 445 LFPDEATTSLCTWHSRSASRCPLISLGH 528
+ T L W +RS C + GH
Sbjct: 101 CSASDDCT-LRIWDARSPYECLKVLRGH 127
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 73.3 bits (172), Expect = 9e-14
Identities = 39/116 (33%), Positives = 65/116 (56%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V +HP ++I +S +RL+DV T +C + H+ V S+ SP+G+Y ASG
Sbjct: 505 VDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG---HRSMVLSLAMSPDGRYMASGDE 561
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
DG++ +WD + RC T H+ S V S++++ L + D ++KLW++ SS
Sbjct: 562 DGTIMMWDLSTARCI-TPLMGHN-SCVWSLSYSGEGSLLASGSADCTVKLWDVTSS 615
Score = 61.3 bits (142), Expect = 4e-10
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +1
Query: 13 FHPLGDHIIASTSHP-VIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
F P G H AS SH R++ + Q P ++ + + PN Y A+GS+D
Sbjct: 468 FSPFG-HYFASCSHDRTARIWSMDRIQ------PLRIMAGHLSDVDWHPNCNYIATGSSD 520
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQ 369
+V+LWD + C F S V S+A + + +Y+ + D +I +W+L+++RC+
Sbjct: 521 KTVRLWDVQTGECVRIFIGHR--SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITP 578
Query: 370 YTG 378
G
Sbjct: 579 LMG 581
Score = 59.7 bits (138), Expect = 1e-09
Identities = 45/173 (26%), Positives = 75/173 (43%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P GD +++S++ IRL+ + VC H V +FSP G YFAS S D
Sbjct: 426 FSPPGDFVLSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDAQFSPFGHYFASCSHDR 482
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
+ ++W + A +S V + N Y+ T D +++LW++ + C+ +
Sbjct: 483 TARIWSMDRIQPLRIMA-----GHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 373 TGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHSRSASRCPLISLGHN 531
G + + + Y+ DE T + W S +RC +GHN
Sbjct: 538 -----IGHRSMVLSLAMSPDGRYMASGDEDGT-IMMW-DLSTARCITPLMGHN 583
Score = 36.7 bits (81), Expect = 0.010
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V S FSP G + S SAD +++LW T N N V F+ Y
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA--NLVCYKGHNYPVWDAQFSPFGHY 474
Query: 301 LLTSGLDSSIKLWEL 345
+ D + ++W +
Sbjct: 475 FASCSHDRTARIWSM 489
Score = 32.3 bits (70), Expect = 0.21
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 229 FNTFANAHDGSEVSSVAFTRNSKYLLTSGL-DSSIKLWELA 348
F TF N H+G SS++ + L+ G DSSIK+W++A
Sbjct: 345 FYTFVNTHNGLNCSSIS---HDGSLVAGGFSDSSIKVWDMA 382
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 235 TFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
T H G V S F+ ++L+S D++I+LW + L+ Y G
Sbjct: 412 TLLLGHSGP-VYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKG 458
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/122 (28%), Positives = 70/122 (57%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
VAF ++A S VI+L+DV ++ H+ ++++F P G++ ASGS+
Sbjct: 64 VAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTG---HRSNCSAVEFHPFGEFLASGSS 120
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D ++K+WD C T+ G +S++ FT + +++++ GLD+ +K+W+L + + L
Sbjct: 121 DANLKIWDIRKKGCIQTYKGHSRG--ISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
Query: 367 QY 372
++
Sbjct: 179 EF 180
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V+S+ F +G++ G +KLWD + F S S+V F ++
Sbjct: 57 HTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHR--SNCSAVEFHPFGEF 114
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L + D+++K+W++ C+ Y G
Sbjct: 115 LASGSSDANLKIWDIRKKGCIQTYKG 140
Score = 41.9 bits (94), Expect = 3e-04
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+ F P G +++ V++++D+T + H+ + S+ F P A+GSA
Sbjct: 148 IRFTPDGRWVVSGGLDNVVKVWDLTAGKLLH---EFKFHEGPIRSLDFHPLEFLLATGSA 204
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKL--WE 342
D +VK WD + + + + V S+ F + + L GLD S+K+ WE
Sbjct: 205 DRTVKFWDLETFELIG--STRPEATGVRSIKFHPDGRTLF-CGLDDSLKVYSWE 255
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 70.9 bits (166), Expect = 5e-13
Identities = 34/122 (27%), Positives = 72/122 (59%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
VAF+ ++A S VI+L+D+ S+ H+ ++++F P G++ ASGS+
Sbjct: 13 VAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTG---HRSNCSAVEFHPFGEFLASGSS 69
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D ++++WDT C T+ G +S++ F+ + +++++ GLD+ +K+W+L + + L
Sbjct: 70 DTNLRVWDTRKKGCIQTYKGHTRG--ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH 127
Query: 367 QY 372
++
Sbjct: 128 EF 129
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V+S+ F+ +G++ G +KLWD ++ F S S+V F ++
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHR--SNCSAVEFHPFGEF 63
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L + D+++++W+ C+ Y G
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYKG 89
Score = 42.7 bits (96), Expect = 1e-04
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQC---FVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+ F P G +++ V++++D+T + F C H+ + S+ F P A+
Sbjct: 97 IEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC------HEGPIRSLDFHPLEFLLAT 150
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKL--WE 342
GSAD +VK WD + T + + V ++AF + + L GLD +K+ WE
Sbjct: 151 GSADRTVKFWDLETFELIGT--TRPEATGVRAIAFHPDGQTLF-CGLDDGLKVYSWE 204
Score = 31.5 bits (68), Expect = 0.37
Identities = 25/90 (27%), Positives = 35/90 (38%)
Frame = +1
Query: 259 SEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTED 438
S V SVAF +L IKLW+L S+ + +TG + A+ H
Sbjct: 8 SPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSN------CSAVEFHPFG 61
Query: 439 YVLFPDEATTSLCTWHSRSASRCPLISLGH 528
L + T+L W +R C GH
Sbjct: 62 EFLASGSSDTNLRVWDTRKKG-CIQTYKGH 90
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 70.5 bits (165), Expect = 6e-13
Identities = 38/129 (29%), Positives = 66/129 (51%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FHP G+ + + ++++D+ C H R VN ++F+P+G++ SG
Sbjct: 200 VNFHPFGEFFASGSLDTNLKIWDIRKKGCI---HTYKGHTRGVNVLRFTPDGRWIVSGGE 256
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D VK+WD + + + F +H+G ++ S+ F + L T D ++K W+L + LI
Sbjct: 257 DNVVKVWDLTAGKLLHEF-KSHEG-KIQSLDFHPHEFLLATGSADKTVKFWDLETFE-LI 313
Query: 367 QYTGAGTTG 393
G TTG
Sbjct: 314 GSGGTETTG 322
Score = 62.9 bits (146), Expect = 1e-10
Identities = 33/121 (27%), Positives = 65/121 (53%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ S+ F P G++FASGS D ++K+WD C +T+ G V+ + FT + ++
Sbjct: 193 HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNVLRFTPDGRW 250
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCT 480
+++ G D+ +K+W+L + + L ++ GK Q++ H +++L A ++
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEF--KSHEGK----IQSLDFHPHEFLLATGSADKTVKF 304
Query: 481 W 483
W
Sbjct: 305 W 305
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H ++S+ F + A+G+A G++KLWD + T S SV F ++
Sbjct: 151 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHR--SNCVSVNFHPFGEF 208
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
+ LD+++K+W++ C+ Y G
Sbjct: 209 FASGSLDTNLKIWDIRKKGCIHTYKG 234
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/116 (28%), Positives = 55/116 (47%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P G I++ V++++D+T + + SH K + S+ F P+ A+GSAD
Sbjct: 244 FTPDGRWIVSGGEDNVVKVWDLTAGK-LLHEFKSHEGK--IQSLDFHPHEFLLATGSADK 300
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
+VK WD + + G V + F + K +L GL S+K++ RC
Sbjct: 301 TVKFWDLETFELIGSGGTETTG--VRCLTFNPDGKSVL-CGLQESLKIFSWEPIRC 353
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/131 (28%), Positives = 65/131 (49%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
+ V FHP G+ + + ++++D+ C H R VN ++F+P+G++ SG
Sbjct: 105 ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI---HTYKGHTRGVNVLRFTPDGRWVVSG 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
D VK+WD + + F +H+G ++ S+ F + L T D ++K W+L +
Sbjct: 162 GEDNIVKVWDLTAGKLLTEF-KSHEG-QIQSLDFHPHEFLLATGSADRTVKFWDLETFE- 218
Query: 361 LIQYTGAGTTG 393
LI G T G
Sbjct: 219 LIGSGGPETAG 229
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/84 (30%), Positives = 51/84 (60%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ S+ F P G++FASGS D ++K+WD C +T+ G V+ + FT + ++
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNVLRFTPDGRW 157
Query: 301 LLTSGLDSSIKLWELASSRCLIQY 372
+++ G D+ +K+W+L + + L ++
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEF 181
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H ++S+ F + A+G+A G++KLWD + T S SV F ++
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR--SNCISVDFHPFGEF 115
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
+ LD+++K+W++ C+ Y G
Sbjct: 116 FASGSLDTNLKIWDIRKKGCIHTYKG 141
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P G +++ +++++D+T + H+ Q+ S+ F P+ A+GSAD
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLT---EFKSHEGQIQSLDFHPHEFLLATGSADR 207
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
+VK WD + + + + V ++F + K +L GL S+K++ RC
Sbjct: 208 TVKFWDLETFELIG--SGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/131 (28%), Positives = 65/131 (49%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
+ V FHP G+ + + ++++D+ C H R VN ++F+P+G++ SG
Sbjct: 105 ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI---HTYKGHTRGVNVLRFTPDGRWVVSG 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
D VK+WD + + F +H+G ++ S+ F + L T D ++K W+L +
Sbjct: 162 GEDNIVKVWDLTAGKLLTEF-KSHEG-QIQSLDFHPHEFLLATGSADRTVKFWDLETFE- 218
Query: 361 LIQYTGAGTTG 393
LI G T G
Sbjct: 219 LIGSGGPETAG 229
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/84 (30%), Positives = 51/84 (60%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ S+ F P G++FASGS D ++K+WD C +T+ G V+ + FT + ++
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNVLRFTPDGRW 157
Query: 301 LLTSGLDSSIKLWELASSRCLIQY 372
+++ G D+ +K+W+L + + L ++
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEF 181
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H ++S+ F + A+G+A G++KLWD + T S SV F ++
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR--SNCISVDFHPFGEF 115
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
+ LD+++K+W++ C+ Y G
Sbjct: 116 FASGSLDTNLKIWDIRKKGCIHTYKG 141
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P G +++ +++++D+T + H+ Q+ S+ F P+ A+GSAD
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLT---EFKSHEGQIQSLDFHPHEFLLATGSADR 207
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
+VK WD + + + + V ++F + K +L GL S+K++ RC
Sbjct: 208 TVKFWDLETFELIG--SGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H++ VN + FSP+GK+ AS S D SV+LW+ ++ + F T H G V V+++ +S+
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQ-FVTVFRGHVG-PVYQVSWSADSRL 416
Query: 301 LLTSGLDSSIKLWELASSR 357
LL+ DS++K+WE+ + +
Sbjct: 417 LLSGSKDSTLKIWEIRTKK 435
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDV-TTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
LCV+F P G + + + +RL+D+ T + F C HK V ++ +SP+GK+ S
Sbjct: 113 LCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK----GHKNWVLTVAWSPDGKHLVS 168
Query: 178 GSADGSVKLWDTVSNRCFNTFANAH----DGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
GS G + W+ + H G V + + +TS D ++W++
Sbjct: 169 GSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDI 228
Query: 346 ASSRCLIQYTG 378
+ +I +G
Sbjct: 229 TLKKSIICLSG 239
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V + FSP+GK ASGS D +V+LWD + T H + V +VA++ + K+
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFT-CKGHK-NWVLTVAWSPDGKH 165
Query: 301 LLTSGLDSSIKLW 339
L++ I W
Sbjct: 166 LVSGSKSGEICCW 178
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW 207
H +V ++ +SP+G+ SG D +KLW
Sbjct: 443 HADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.9 bits (141), Expect = 5e-10
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGK------ 165
CV + P G + + + +++++ S FV + H +++ +I++SP G
Sbjct: 453 CVKWDPTGSLLASCSDDSTAKIWNIKQST-FVHDL--REHTKEIYTIRWSPTGPGTNNPN 509
Query: 166 ---YFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKL 336
AS S D +VKLWD + +F N H V S+AF+ N +Y+ + LD SI +
Sbjct: 510 KQLTLASASFDSTVKLWDAELGKMLCSF-NGHR-EPVYSLAFSPNGEYIASGSLDKSIHI 567
Query: 337 WELASSRCLIQYTGAG 384
W + + + YTG G
Sbjct: 568 WSIKEGKIVKTYTGNG 583
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/87 (24%), Positives = 45/87 (51%)
Frame = +1
Query: 112 SHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
S+ + V ++ ++ G A+GS DG ++W T++ +T + H G + S+ + +
Sbjct: 320 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSK-HKG-PIFSLKWNKK 376
Query: 292 SKYLLTSGLDSSIKLWELASSRCLIQY 372
YLLT +D + +W++ + Q+
Sbjct: 377 GDYLLTGSVDRTAVVWDVKAEEWKQQF 403
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK + S+K++ G Y +GS D + +WD + F H G + RN+
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQF-EFHSGPTLD--VDWRNNVS 420
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
TS DS I L ++ +R +TG
Sbjct: 421 FATSSTDSMIYLCKIGETRPAKTFTG 446
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF------ 282
H+ +VN +K+ P G AS S D + K+W+ + F H E+ ++ +
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWN-IKQSTFVHDLREHT-KEIYTIRWSPTGPG 504
Query: 283 TRNSKYLLT---SGLDSSIKLWELASSRCLIQYTG 378
T N LT + DS++KLW+ + L + G
Sbjct: 505 TNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNG 539
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSV 276
H +V + +SP+ ASGS D + ++W +F H G ++++
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSIPE----GSFKAVHTGRNINAL 311
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHH-HKRQVNSIKFSPNGKYFASGSADGSVKLW 207
H +A+ +P IRL+DV ++ PV ++ H V ++ F + K+ SGS DG+VK+W
Sbjct: 48 HYLAAACNPHIRLFDVNSNS--PQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIW 105
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
D + C + + + V++V N L++ + +I++W+L ++ C
Sbjct: 106 DLRAPGCQKEYESV---AAVNTVVLHPNQTELISGDQNGNIRVWDLRANSC 153
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H + SP KY A+ S+D +VK+W+ V H V F+ + ++
Sbjct: 210 HNGHILKCLLSPANKYLATASSDKTVKIWN-VDGFKLEKVLTGHQ-RWVWDCVFSVDGEF 267
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L+T+ D + +LW + + + + Y G
Sbjct: 268 LVTASSDMTARLWSMPAGKEVKVYQG 293
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +1
Query: 172 ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
A+ S D +++ W+ + RC+ T + S V+ + T + K+ L + + I+L+++ S
Sbjct: 9 ATASYDHTIRFWEAETGRCYRTI--QYPDSHVNRLEITPD-KHYLAAACNPHIRLFDVNS 65
Query: 352 S 354
+
Sbjct: 66 N 66
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH 252
H+R V FS +G++ + S+D + +LW + + + H
Sbjct: 252 HQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 57.2 bits (132), Expect = 6e-09
Identities = 36/119 (30%), Positives = 59/119 (49%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F P +A+ S + ++D+ + V H V+S+ +SPNG+ AS S
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH--SSNVHSVCWSPNGELVASVSE 695
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +VKLW S C + +N+ G++ SV F + LL G +I+LW ++C+
Sbjct: 696 D-AVKLWSLSSGDCIHELSNS--GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM 751
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+C +F G ++AS H + ++++ T Q P H + ++F PN A+
Sbjct: 512 ICCSFSYDGK-LLASAGHDKKVFIWNMETLQVESTP---EEHAHIITDVRFRPNSTQLAT 567
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
S D ++K+WD F + H +S + ++ L + ++ I+ W++ +S
Sbjct: 568 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS- 626
Query: 358 CLIQYTGAGT 387
C+ GA T
Sbjct: 627 CVRAVKGAST 636
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIAST-SHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+ + FHP ++ S S+ IR +D+ S C V V K ++F P F +
Sbjct: 597 MSIDFHPKKTELLCSCDSNNDIRFWDINAS-C-VRAV-----KGASTQVRFQPRTGQFLA 649
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
+++ +V ++D +N H S V SV ++ N + L+ S + ++KLW L+S
Sbjct: 650 AASENTVSIFDIENNNKRVNIFKGHS-SNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGD 707
Query: 358 CLIQYTGAG 384
C+ + + +G
Sbjct: 708 CIHELSNSG 716
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FHP ++ + I L++ ++C H+ ++++ SP+ AS S
Sbjct: 722 VVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA----GHECVISALAQSPSTGVVASASH 777
Query: 187 DGSVKLW 207
D SVK+W
Sbjct: 778 DKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 57.2 bits (132), Expect = 6e-09
Identities = 36/119 (30%), Positives = 59/119 (49%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F P +A+ S + ++D+ + V H V+S+ +SPNG+ AS S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH--SSNVHSVCWSPNGELVASVSE 697
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +VKLW S C + +N+ G++ SV F + LL G +I+LW ++C+
Sbjct: 698 D-AVKLWSLSSGDCIHELSNS--GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM 753
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+C +F G ++AS H + ++++ T Q P H + ++F PN A+
Sbjct: 514 ICCSFSYDGK-LLASAGHDKKVFIWNMETLQVESTP---EEHAHIITDVRFRPNSTQLAT 569
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
S D ++K+WD F + H +S + ++ L + ++ I+ W++ +S
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS- 628
Query: 358 CLIQYTGAGT 387
C+ GA T
Sbjct: 629 CVRAVKGAST 638
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIAST-SHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+ + FHP ++ S S+ IR +D+ S C V V K ++F P F +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDINAS-C-VRAV-----KGASTQVRFQPRTGQFLA 651
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
+++ +V ++D +N H S V SV ++ N + L+ S + ++KLW L+S
Sbjct: 652 AASENTVSIFDIENNNKRVNIFKGHS-SNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGD 709
Query: 358 CLIQYTGAG 384
C+ + + +G
Sbjct: 710 CIHELSNSG 718
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FHP ++ + I L++ ++C H+ ++++ SP+ AS S
Sbjct: 724 VVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA----GHECVISALAQSPSTGVVASASH 779
Query: 187 DGSVKLW 207
D SVK+W
Sbjct: 780 DKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 57.2 bits (132), Expect = 6e-09
Identities = 36/119 (30%), Positives = 59/119 (49%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F P +A+ S + ++D+ + V H V+S+ +SPNG+ AS S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH--SSNVHSVCWSPNGELVASVSE 697
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +VKLW S C + +N+ G++ SV F + LL G +I+LW ++C+
Sbjct: 698 D-AVKLWSLSSGDCIHELSNS--GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM 753
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+C +F G ++AS H + ++++ T Q P H + ++F PN A+
Sbjct: 514 ICCSFSYDGK-LLASAGHDKKVFIWNMETLQVESTP---EEHAHIITDVRFRPNSTQLAT 569
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
S D ++K+WD F + H +S + ++ L + ++ I+ W++ +S
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS- 628
Query: 358 CLIQYTGAGT 387
C+ GA T
Sbjct: 629 CVRAVKGAST 638
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIAST-SHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+ + FHP ++ S S+ IR +D+ S C V V K ++F P F +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDINAS-C-VRAV-----KGASTQVRFQPRTGQFLA 651
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
+++ +V ++D +N H S V SV ++ N + L+ S + ++KLW L+S
Sbjct: 652 AASENTVSIFDIENNNKRVNIFKGHS-SNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGD 709
Query: 358 CLIQYTGAG 384
C+ + + +G
Sbjct: 710 CIHELSNSG 718
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FHP ++ + I L++ ++C H+ ++++ SP+ AS S
Sbjct: 724 VVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA----GHECVISALAQSPSTGVVASASH 779
Query: 187 DGSVKLW 207
D SVK+W
Sbjct: 780 DKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 57.2 bits (132), Expect = 6e-09
Identities = 36/119 (30%), Positives = 59/119 (49%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F P +A+ S + ++D+ + V H V+S+ +SPNG+ AS S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH--SSNVHSVCWSPNGELVASVSE 697
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +VKLW S C + +N+ G++ SV F + LL G +I+LW ++C+
Sbjct: 698 D-AVKLWSLSSGDCIHELSNS--GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM 753
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+C +F G ++AS H + ++++ T Q P H + ++F PN A+
Sbjct: 514 ICCSFSYDGK-LLASAGHDKKVFIWNMETLQVESTP---EEHAHIITDVRFRPNSTQLAT 569
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
S D ++K+WD F + H +S + ++ L + ++ I+ W++ +S
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS- 628
Query: 358 CLIQYTGAGT 387
C+ GA T
Sbjct: 629 CVRAVKGAST 638
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIAST-SHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+ + FHP ++ S S+ IR +D+ S C V V K ++F P F +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDINAS-C-VRAV-----KGASTQVRFQPRTGQFLA 651
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
+++ +V ++D +N H S V SV ++ N + L+ S + ++KLW L+S
Sbjct: 652 AASENTVSIFDIENNNKRVNIFKGHS-SNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGD 709
Query: 358 CLIQYTGAG 384
C+ + + +G
Sbjct: 710 CIHELSNSG 718
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FHP ++ + I L++ ++C H+ ++++ SP+ AS S
Sbjct: 724 VVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA----GHECVISALAQSPSTGVVASASH 779
Query: 187 DGSVKLW 207
D SVK+W
Sbjct: 780 DKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 57.2 bits (132), Expect = 6e-09
Identities = 36/119 (30%), Positives = 59/119 (49%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V F P +A+ S + ++D+ + V H V+S+ +SPNG+ AS S
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH--SSNVHSVCWSPNGELVASVSE 697
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +VKLW S C + +N+ G++ SV F + LL G +I+LW ++C+
Sbjct: 698 D-AVKLWSLSSGDCIHELSNS--GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCM 753
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+C +F G ++AS H + ++++ T Q P H + ++F PN A+
Sbjct: 514 ICCSFSYDGK-LLASAGHDKKVFIWNMETLQVESTP---EEHAHIITDVRFRPNSTQLAT 569
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
S D ++K+WD F + H +S + ++ L + ++ I+ W++ +S
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS- 628
Query: 358 CLIQYTGAGT 387
C+ GA T
Sbjct: 629 CVRAVKGAST 638
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIAST-SHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+ + FHP ++ S S+ IR +D+ S C V V K ++F P F +
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDINAS-C-VRAV-----KGASTQVRFQPRTGQFLA 651
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
+++ +V ++D +N H S V SV ++ N + L+ S + ++KLW L+S
Sbjct: 652 AASENTVSIFDIENNNKRVNIFKGHS-SNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGD 709
Query: 358 CLIQYTGAG 384
C+ + + +G
Sbjct: 710 CIHELSNSG 718
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FHP ++ + I L++ ++C H+ ++++ SP+ AS S
Sbjct: 724 VVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA----GHECVISALAQSPSTGVVASASH 779
Query: 187 DGSVKLW 207
D SVK+W
Sbjct: 780 DKSVKIW 786
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 56.8 bits (131), Expect = 9e-09
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V S+ F P+ ++F +GSAD ++K+WD V+ H G +V +A + Y
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIG-QVRGLAVSNRHTY 226
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
+ ++G D +K W+L ++ + Y G
Sbjct: 227 MFSAGDDKQVKCWDLEQNKVIRSYHG 252
Score = 44.0 bits (99), Expect = 6e-05
Identities = 30/113 (26%), Positives = 47/113 (41%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
VAF P + ++ I+++DV T V + H QV + S Y S
Sbjct: 176 VAFDPSNEWFCTGSADRTIKIWDVATG---VLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
D VK WD N+ ++ G V +A +LT G DS ++W++
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHG--VYCLALHPTLDVVLTGGRDSVCRVWDI 283
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTS-QCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
C+A HP D ++ V R++D+ T Q FV P H V S+ P +G
Sbjct: 259 CLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-----HDSDVFSVLARPTDPQVITG 313
Query: 181 SADGSVKLWDTVSNRCFNTFAN 246
S D ++K WD + T N
Sbjct: 314 SHDSTIKFWDLRYGKSMATITN 335
Score = 27.9 bits (59), Expect = 4.5
Identities = 24/115 (20%), Positives = 43/115 (37%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V P +I + I+ +D+ + +HK+ V ++ P F S SA
Sbjct: 301 VLARPTDPQVITGSHDSTIKFWDLRYGKSMATIT---NHKKTVRAMALHPKENDFVSASA 357
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
D K C N + D +++VA + ++T G + W+ S
Sbjct: 358 DNIKKFSLPKGEFCHNMLSLQRD--IINAVAVNEDG-VMVTGGDKGGLWFWDWKS 409
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 56.8 bits (131), Expect = 9e-09
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGK-YFASGSADGSVK 201
G I++++ +R +DV T + H VNS + G SGS DG+ K
Sbjct: 108 GSQIVSASPDKTVRAWDVETGKQIK---KMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 202 LWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGA 381
LWD TF + + ++++V+F+ + + T G+D+ +K+W+L +
Sbjct: 165 LWDMRQRGAIQTFPDKY---QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT---- 217
Query: 382 GTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHSR---SASRCPLISLGH 528
G QD + + Y+L + LC W R +RC I GH
Sbjct: 218 -LEGHQDTITGMSLSPDGSYLL-TNGMDNKLCVWDMRPYAPQNRCVKIFEGH 267
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V ++KF+P G ASGS D + LW V C N + + + +T +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 301 LLTSGLDSSIKLWELASSR 357
++++ D +++ W++ + +
Sbjct: 111 IVSASPDKTVRAWDVETGK 129
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 115 HHHKRQVNSIK--FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTR 288
H H + N +K +SP+G +GS+D V +WDT S R H GS V+ F
Sbjct: 267 HQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLP-GHTGS-VNECVFHP 324
Query: 289 NSKYLLTSGLDSSIKLWEL 345
+ + D +I L E+
Sbjct: 325 TEPIIGSCSSDKNIYLGEI 343
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 56.4 bits (130), Expect = 1e-08
Identities = 41/114 (35%), Positives = 61/114 (53%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
AFHP G + TS V++++DV SQ V H +V +I FS NG + A+ + D
Sbjct: 360 AFHPDGLILGTGTSQSVVKIWDVK-SQANVAKFDGH--TGEVTAISFSENGYFLATAAED 416
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
G V+LWD R F +F +A + +SV F + YL + S IK+++ AS
Sbjct: 417 G-VRLWDLRKLRNFKSFLSA----DANSVEFDPSGSYLGIAA--SDIKVYQTAS 463
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/117 (21%), Positives = 53/117 (45%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
D ++ +++ +R++ + C + H +V ++ P KYF S S DG+ +
Sbjct: 277 DLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFY 336
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
D S C ++ + ++ AF + L T S +K+W++ S + ++ G
Sbjct: 337 DLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDG 393
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS-EVSSVAFTRNSK 297
H ++V S+KF + + SAD +V++W + + +D S EV +V +K
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNK 322
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
Y +++ LD + ++L+S CL Q + + D+ A A H + +L + + +
Sbjct: 323 YFVSASLDGTWCFYDLSSGSCLAQV--SDDSKNVDYTAAAF--HPDGLILGTGTSQSVVK 378
Query: 478 TWHSRS 495
W +S
Sbjct: 379 IWDVKS 384
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 56.4 bits (130), Expect = 1e-08
Identities = 41/114 (35%), Positives = 61/114 (53%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
AFHP G + TS V++++DV SQ V H +V +I FS NG + A+ + D
Sbjct: 360 AFHPDGLILGTGTSQSVVKIWDVK-SQANVAKFDGH--TGEVTAISFSENGYFLATAAED 416
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
G V+LWD R F +F +A + +SV F + YL + S IK+++ AS
Sbjct: 417 G-VRLWDLRKLRNFKSFLSA----DANSVEFDPSGSYLGIAA--SDIKVYQTAS 463
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/117 (21%), Positives = 53/117 (45%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
D ++ +++ +R++ + C + H +V ++ P KYF S S DG+ +
Sbjct: 277 DLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFY 336
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
D S C ++ + ++ AF + L T S +K+W++ S + ++ G
Sbjct: 337 DLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDG 393
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS-EVSSVAFTRNSK 297
H ++V S+KF + + SAD +V++W + + +D S EV +V +K
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNK 322
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
Y +++ LD + ++L+S CL Q + + D+ A A H + +L + + +
Sbjct: 323 YFVSASLDGTWCFYDLSSGSCLAQV--SDDSKNVDYTAAAF--HPDGLILGTGTSQSVVK 378
Query: 478 TWHSRS 495
W +S
Sbjct: 379 IWDVKS 384
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/113 (25%), Positives = 55/113 (48%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V H + ++++ YD+++ C + + + F P+G +G+A
Sbjct: 315 VTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTA 374
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
VK+WD S F H+G E++S++F+ N +L T+ LD ++LW+L
Sbjct: 375 QSIVKIWDVKSQANVAKF-GGHNG-EITSISFSENGYFLATAALD-GVRLWDL 424
Score = 54.8 bits (126), Expect = 3e-08
Identities = 38/114 (33%), Positives = 61/114 (53%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
AFHP G + T+ +++++DV SQ V H+ ++ SI FS NG + A+ + D
Sbjct: 361 AFHPDGLILGTGTAQSIVKIWDVK-SQANVAKFGGHNG--EITSISFSENGYFLATAALD 417
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
G V+LWD + F TF D + +SV F + YL + S I++++ AS
Sbjct: 418 G-VRLWDLRKLKNFRTF----DFPDANSVEFDHSGSYLGIAA--SDIRVFQAAS 464
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS-EVSSVAFTRNSK 297
H ++V SIKF + + S+D +V++W + + + D S EV +V +K
Sbjct: 263 HSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNK 322
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
Y +++ LDS+ ++L+S CL Q T A + ++ A A H + +L A + +
Sbjct: 323 YFVSASLDSTWCFYDLSSGLCLAQVTDA-SENDVNYTAAAF--HPDGLILGTGTAQSIVK 379
Query: 478 TWHSRSASRCPLISLGHN 531
W +S + GHN
Sbjct: 380 IWDVKSQANVAKFG-GHN 396
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 56.0 bits (129), Expect = 1e-08
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASG 180
CVA HP ++++S+ +I+L+D + + C H V + F+P + FAS
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWD--WEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-YLLTSGLDSSIKLWELASSR 357
S D ++K+W+ + + N +AH FT K YL+T D + K+W+ +
Sbjct: 162 SLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
C+ G H A+ H E ++ ++ WH+
Sbjct: 221 CVQTLEG------HTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 CVAFHPLGD--HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
CV + GD ++I + +++D T C V + H H V+++ F P +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-VQTLEGHTHN--VSAVCFHPELPIIIT 246
Query: 178 GSADGSVKLWDTVSNRCFNT 237
GS DG+V++W + R NT
Sbjct: 247 GSEDGTVRIWHATTYRLENT 266
Score = 35.5 bits (78), Expect = 0.023
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDT 213
++A IR+Y+ T H + + P Y S S D +KLWD
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 214 VSNRCFNTFANAHDGSEVSSVAFT-RNSKYLLTSGLDSSIKLWELAS 351
H V V F +++ ++ LD +IK+W L S
Sbjct: 129 EKGWACTQIFEGH-SHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 55.6 bits (128), Expect = 2e-08
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASG 180
CVA HP ++++S+ +I+L+D + C H V + F+P + FAS
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWDWENG--WACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-YLLTSGLDSSIKLWELASSR 357
S D ++K+W+ + + N +AH FT K YL+T D + K+W+ +
Sbjct: 162 SLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
C+ G H A+ H E ++ ++ WH+
Sbjct: 221 CVQTLDG------HTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 CVAFHPLGD--HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
CV + GD ++I + +++D T C V + H H V+++ F P +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-VQTLDGHTHN--VSAVCFHPELPIIIT 246
Query: 178 GSADGSVKLWDTVSNRCFNT 237
GS DG+V++W + R NT
Sbjct: 247 GSEDGTVRIWHATTYRLENT 266
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/113 (23%), Positives = 42/113 (37%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P ++A IR+Y+ T H + + P Y S S D
Sbjct: 65 FIPRKQWVVAGADDMYIRVYNYNTMDKVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
+KLWD + H + V +++ ++ LD +IK+W L S
Sbjct: 122 LIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 55.6 bits (128), Expect = 2e-08
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASG 180
CVA HP ++++S+ +I+L+D + C H V + F+P + FAS
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWDWENG--WACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-YLLTSGLDSSIKLWELASSR 357
S D ++K+W+ + + N +AH FT K YL+T D + K+W+ +
Sbjct: 162 SLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
C+ G H A+ H E ++ ++ WH+
Sbjct: 221 CVQTLDG------HTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 CVAFHPLGD--HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
CV + GD ++I + +++D T C V + H H V+++ F P +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-VQTLDGHTHN--VSAVCFHPELPIIIT 246
Query: 178 GSADGSVKLWDTVSNRCFNT 237
GS DG+V++W + R NT
Sbjct: 247 GSEDGTVRIWHATTYRLENT 266
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/113 (23%), Positives = 42/113 (37%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P ++A IR+Y+ T H + + P Y S S D
Sbjct: 65 FIPRKQWVVAGADDMYIRVYNYNTMDKVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
+KLWD + H + V +++ ++ LD +IK+W L S
Sbjct: 122 LIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 55.6 bits (128), Expect = 2e-08
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASG 180
CVA HP ++++S+ +I+L+D + C H V + F+P + FAS
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWDWENG--WACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-YLLTSGLDSSIKLWELASSR 357
S D ++K+W+ + + N +AH FT K YL+T D + K+W+ +
Sbjct: 162 SLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
C+ G H A+ H E ++ ++ WH+
Sbjct: 221 CVQTLDG------HTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 CVAFHPLGD--HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
CV + GD ++I + +++D T C V + H H V+++ F P +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-VQTLDGHTHN--VSAVCFHPELPIIIT 246
Query: 178 GSADGSVKLWDTVSNRCFNT 237
GS DG+V++W + R NT
Sbjct: 247 GSEDGTVRIWHATTYRLENT 266
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/113 (23%), Positives = 42/113 (37%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P ++A IR+Y+ T H + + P Y S S D
Sbjct: 65 FIPRKQWVVAGADDMYIRVYNYNTMDKVKV---FEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
+KLWD + H + V +++ ++ LD +IK+W L S
Sbjct: 122 LIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGS 174
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H VN + +SP+ + A+G+ D VK+W+ +S CF TF H + V+++ F ++
Sbjct: 348 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTE-HTNA-VTALHFMADNHS 405
Query: 301 LLTSGLDSSIKLWELASSRCLIQYT 375
LL++ LD +++ W+ + YT
Sbjct: 406 LLSASLDGTVRAWDFKRYKNYKTYT 430
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR-CFNTFANAHDGSEVSSVAFTRNSK 297
H+ V+ + FSP + AS S D +V+LWD +++ TF + HD V +VAF + K
Sbjct: 476 HEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHD---VLTVAFRPDGK 532
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAG 384
L +S LD I W+ ++ YT G
Sbjct: 533 QLASSTLDGQINFWDTIEG--VLMYTIEG 559
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F PL + +S+ +RL+DV S+ V + H V ++ F P+GK AS + DG
Sbjct: 485 FSPLTQLLASSSWDYTVRLWDVFASKG---TVETFRHNHDVLTVAFRPDGKQLASSTLDG 541
Query: 193 SVKLWDTVSNRCFNTFANAHD 255
+ WDT+ T D
Sbjct: 542 QINFWDTIEGVLMYTIEGRRD 562
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR-------CFNTFANAHDGSEVSSVAF 282
K +V ++KFSPNGK+ A G V++W + R TFAN+ D +V S+ +
Sbjct: 93 KDKVGALKFSPNGKFIAVGIGK-LVEIWRSPGFRRAVLPFERVRTFANSDD--KVVSLEW 149
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTE 435
+ +S YLL D + + + +A + + G T K + ++ H+E
Sbjct: 150 SLDSDYLLVGSRDLAARAFTIARDGYIFSW---GYTEKDVKMDESEDGHSE 197
Score = 36.3 bits (80), Expect = 0.013
Identities = 20/92 (21%), Positives = 37/92 (40%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
CV + P + +++++V + CF+ H V ++ F + S S
Sbjct: 354 CVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFT---EHTNAVTALHFMADNHSLLSAS 410
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVA 279
DG+V+ WD + + T+ VS A
Sbjct: 411 LDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA 442
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H VN + +SP+ + A+G+ D VK+W+ +S CF TF H + V+++ F ++
Sbjct: 388 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTE-HTNA-VTALHFMADNHS 445
Query: 301 LLTSGLDSSIKLWELASSRCLIQYT 375
LL++ LD +++ W+ + YT
Sbjct: 446 LLSASLDGTVRAWDFKRYKNYKTYT 470
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR-CFNTFANAHDGSEVSSVAFTRNSK 297
H+ V+ + FSP + AS S D +V+LWD +++ TF + HD V +VAF + K
Sbjct: 516 HEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHD---VLTVAFRPDGK 572
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAG 384
L +S LD I W+ ++ YT G
Sbjct: 573 QLASSTLDGQINFWDTIEG--VLMYTIEG 599
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F PL + +S+ +RL+DV S+ V + H V ++ F P+GK AS + DG
Sbjct: 525 FSPLTQLLASSSWDYTVRLWDVFASKG---TVETFRHNHDVLTVAFRPDGKQLASSTLDG 581
Query: 193 SVKLWDTVSNRCFNTFANAHD 255
+ WDT+ T D
Sbjct: 582 QINFWDTIEGVLMYTIEGRRD 602
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR-------CFNTFANAHDGSEVSSVAF 282
K +V ++KFSPNGK+ A G V++W + R TFAN+ D +V S+ +
Sbjct: 93 KDKVGALKFSPNGKFIAVGIGK-LVEIWRSPGFRRAVLPFERVRTFANSDD--KVVSLEW 149
Query: 283 TRNSKYLLTSGLDSSIKLW 339
+ +S YLL D + +L+
Sbjct: 150 SLDSDYLLVGSRDLAARLF 168
Score = 36.3 bits (80), Expect = 0.013
Identities = 20/92 (21%), Positives = 37/92 (40%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
CV + P + +++++V + CF+ H V ++ F + S S
Sbjct: 394 CVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFT---EHTNAVTALHFMADNHSLLSAS 450
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVA 279
DG+V+ WD + + T+ VS A
Sbjct: 451 LDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA 482
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 37 IASTSHPVIRLYDVTTSQCFVCPVPSH-HHKRQVNSIKFSPNGKYFASGSADGSVKLWDT 213
+ + +P IRL+D+ + + PV + H + V ++ F G SGS DGSVK+WD
Sbjct: 55 LVAACNPHIRLFDLRSYNPHI-PVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL 113
Query: 214 VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
C F + S V++V N L++ + +I++W+L + C
Sbjct: 114 RVRECQREFRSV---SPVNTVVLHPNQTELISGDQNGNIRVWDLRADLC 159
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H + SP KY A+ S+D +VK+W+ + H+ V F+ + +Y
Sbjct: 216 HNSHILKCLLSPGNKYLATASSDKTVKIWN-LDGFKLEKVLTGHE-RWVWDCDFSMDGEY 273
Query: 301 LLTSGLDSSIKLWELASSR 357
L+T+ D++ +LW + + +
Sbjct: 274 LVTASSDTTARLWSMRAGK 292
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 166 YFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
Y A+ S D +++LW + RC+ F+ + V+ + T K L + + I+L++L
Sbjct: 12 YLATASHDQTIRLWQARTGRCY--FSFRYPDLHVNRLELT-PEKGKLVAACNPHIRLFDL 68
Query: 346 AS 351
S
Sbjct: 69 RS 70
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 298 YLLTSGLDSSIKLWELASSRCLIQY 372
YL T+ D +I+LW+ + RC +
Sbjct: 12 YLATASHDQTIRLWQARTGRCYFSF 36
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASG 180
CVA HP ++++S+ +I+L+D + ++C H V + F+P + FAS
Sbjct: 104 CVAVHPTLPYVLSSSDDMLIKLWD--WEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-YLLTSGLDSSIKLWELASSR 357
S D ++K+W+ + + N +AH FT K YL+T D + K+W+ +
Sbjct: 162 SLDRTIKIWN-LGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
C+ G H A+ H E ++ ++ WH+
Sbjct: 221 CVQTLEG------HTHNVSAVSFHPELPIIITGSEDGTVRIWHA 258
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 4 CVAFHPLGD--HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
CV + GD ++I + +++D T C V + H H V+++ F P +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-VQTLEGHTHN--VSAVSFHPELPIIIT 246
Query: 178 GSADGSVKLWDTVSNRCFNT 237
GS DG+V++W + R NT
Sbjct: 247 GSEDGTVRIWHATTYRLENT 266
Score = 35.1 bits (77), Expect = 0.030
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDT 213
++A IR+Y+ T H + + P Y S S D +KLWD
Sbjct: 72 VVAGADDMFIRVYNYNTMDKIKV---FEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 214 VSNRCFNTFANAHDGSEVSSVAFT-RNSKYLLTSGLDSSIKLWELAS 351
H V V F +++ ++ LD +IK+W L S
Sbjct: 129 EKGWLCTQIFEGH-SHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V S+ F P+ ++F +GSAD ++K+WD V+ H +V +A + Y
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHI-EQVRGLAVSNRHTY 232
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
+ ++G D +K W+L ++ + Y G
Sbjct: 233 MFSAGDDKQVKCWDLEQNKVIRSYHG 258
Score = 48.4 bits (110), Expect = 3e-06
Identities = 33/128 (25%), Positives = 52/128 (40%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
VAF P + ++ I+++DV T V + H QV + S Y S
Sbjct: 182 VAFDPSNEWFCTGSADRTIKIWDVATG---VLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D VK WD N+ ++ G V +A LLT G DS ++W++ + +
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSG--VYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIF 296
Query: 367 QYTGAGTT 390
+G T
Sbjct: 297 ALSGHDNT 304
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTS-QCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
C+A HP D ++ V R++D+ T Q F H V S+ P +G
Sbjct: 265 CLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL----SGHDNTVCSVFTRPTDPQVVTG 320
Query: 181 SADGSVKLWDTVSNRCFNTFAN 246
S D ++K WD + +T +
Sbjct: 321 SHDTTIKFWDLRYGKTMSTLTH 342
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 LCVAF-HPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
+C F P ++ + I+ +D+ + HHK+ V ++ P FAS
Sbjct: 305 VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLT---HHKKSVRAMTLHPKENAFAS 361
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
SAD + K C N + + ++++A + ++T G + SI W+ S
Sbjct: 362 ASADNTKKFSLPKGEFCHNML--SQQKTIINAMAVNEDG-VMVTGGDNGSIWFWDWKSGH 418
Query: 358 CLIQ 369
Q
Sbjct: 419 SFQQ 422
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 54.4 bits (125), Expect = 5e-08
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Frame = +1
Query: 7 VAFHPLGDH------IIASTSHP-VIRLYDVTT-SQCFVCP-VPSHHHKRQVNSIKFSPN 159
VA++P+ H I+AS S +R+++ ++ S+ + C V H R V S +SP+
Sbjct: 26 VAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPS 85
Query: 160 GKYFASGSADGSVKLWDTVSN--RCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIK 333
G+ A+ S DG+ +W + C +T H+ +EV SV++ + L T D S+
Sbjct: 86 GQLLATASFDGTTGIWKNYGSEFECISTL-EGHE-NEVKSVSWNASGSCLATCSRDKSVW 143
Query: 334 LWELASSRCLIQYTGAGT-TGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
+WE+ +Y A TG + ++ T D VLF ++ W S
Sbjct: 144 IWEVLEGN---EYDCAAVLTGHTQDVKMVQWHPTMD-VLFSCSYDNTIKVWWS 192
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 54.4 bits (125), Expect = 5e-08
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQC-----FVCPVPSHHHKRQVNSIKFSPNGKY 168
C F P G + +S+ I ++D + + + H V I FS + +
Sbjct: 218 CARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEM 277
Query: 169 FASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELA 348
ASGS DG +K+W + C F +AH V+S++F+R+ LL++ D + ++ L
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRF-DAH-SQGVTSLSFSRDGSQLLSTSFDQTARIHGLK 335
Query: 349 SSRCLIQYTG 378
S + L ++ G
Sbjct: 336 SGKLLKEFRG 345
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS------EVSSVAFT 285
K +FSP+G++ AS S DG +++WD +S + D S V + F+
Sbjct: 213 KSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFS 272
Query: 286 RNSKYLLTSGLDSSIKLWELASSRCLIQY 372
R+S+ L + D IK+W + + C+ ++
Sbjct: 273 RDSEMLASGSQDGKIKIWRIRTGVCIRRF 301
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 53.6 bits (123), Expect = 8e-08
Identities = 36/127 (28%), Positives = 57/127 (44%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HKR++ S++FS + + S D +VK+W C TF H S V +F +
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF-EGHT-SSVLRASFITDGTQ 597
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCT 480
++ G D +KLW + +S C+ Y + A A+ TE +A +L
Sbjct: 598 FVSCGADGLLKLWNVNTSECIATY----DQHEDKVWALAVGKKTEMIATGGGDAVINL-- 651
Query: 481 WHSRSAS 501
WH +AS
Sbjct: 652 WHDSTAS 658
Score = 43.6 bits (98), Expect = 8e-05
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +1
Query: 121 HKRQVNSIKFSP--NGKYFASGSADGSVKLWD----TVSNRCFNTFANAHDGSEVSSVAF 282
HK V+SI F P N SGS D +V++WD +C H S V+S+A
Sbjct: 143 HKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCL-AIMEKH-FSAVTSIAL 200
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRC 360
+ + L ++G D + LW+L C
Sbjct: 201 SEDGLTLFSAGRDKVVNLWDLHDYSC 226
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNG-KYFASGSADGSVKLW- 207
I+ + +RL++ T+ C H + ++ F+ +F SGS D ++K+W
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTG---HNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 208 -DTVS-------NRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
D +S N + AHD +++SVA RN + T D + +W L
Sbjct: 476 LDGISEDSEEPINLKTRSVVAAHD-KDINSVAVARNDSLVCTGSEDRTASIWRL 528
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/86 (22%), Positives = 40/86 (46%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H + +NS+ + N +GS D + +W + + H + SV F+ +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIW-RLPDLVHVVTLKGHK-RRIFSVEFSTVDQC 555
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
++T+ D ++K+W ++ CL + G
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEG 581
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
+ ++ SP+ K S +++WD + +C ++ H+G V +A + L T+
Sbjct: 63 LTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSW-KGHEG-PVMGMACHASGGLLATA 120
Query: 313 GLDSSIKLWELASSRCLIQYTG 378
G D + +W++ C + G
Sbjct: 121 GADRKVLVWDVDGGFCTHYFRG 142
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +1
Query: 151 SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSI 330
S +G + A D + + D+ + +T D ++++A + + K L ++G I
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESD--TLTALALSPDDKLLFSAGHSRQI 84
Query: 331 KLWELASSRCLIQYTG 378
++W+L + +C+ + G
Sbjct: 85 RVWDLETLKCIRSWKG 100
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 53.6 bits (123), Expect = 8e-08
Identities = 28/101 (27%), Positives = 48/101 (47%)
Frame = +1
Query: 61 IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF 240
IR++D C V + HK V +++++ G ASGS D + LWD V
Sbjct: 88 IRIWDTEKG---TCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRL 144
Query: 241 ANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D +V+ + F K L++S D +++W+L + C+
Sbjct: 145 RGHRD--QVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCM 183
Score = 53.6 bits (123), Expect = 8e-08
Identities = 34/126 (26%), Positives = 57/126 (45%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
L VA P HI + ++++ + + + ++ + HK V I S +G+ +G
Sbjct: 544 LAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLS---LYGHKLPVMCIDISSDGELIVTG 600
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
S D ++K+W C + AH G V V F RN+ YL + G D +K W+
Sbjct: 601 SQDKNLKIWGLDFGDCHKSIF-AH-GDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEH 658
Query: 361 LIQYTG 378
L+ G
Sbjct: 659 LLTLEG 664
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHH---KRQVNSIKFSPNGKYFAS 177
+A+ G +++A V ++ V C PS V SI S + A
Sbjct: 24 IAYDSTGKYVLAPALEKV-GIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASS-LVAV 81
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
G ADGS+++WDT C F N+H G+ V+++ + + L + D+ I LW++
Sbjct: 82 GYADGSIRIWDTEKGTCEVNF-NSHKGA-VTALRYNKVGSMLASGSKDNDIILWDVVGES 139
Query: 358 CLIQYTG 378
L + G
Sbjct: 140 GLFRLRG 146
Score = 32.7 bits (71), Expect = 0.16
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
LC P + I T V+ + D+ S V V +H + SI PN F +
Sbjct: 449 LCSLIVPQNKYGIVGTKSGVLEIIDIG-SATKVEEVKAHGGT--IWSITPIPNDSGFVTV 505
Query: 181 SADGSVKLWD-TVSNRCFN-----TFANAHD---GSEVSSVAFTRNSKYLLTSGLDSSIK 333
SAD VK W+ V + T +N +V +VA + ++K++ + LDS++K
Sbjct: 506 SADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVK 565
Query: 334 LWELASSRCLIQYTG 378
++ + S + + G
Sbjct: 566 VFYMDSLKFYLSLYG 580
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +1
Query: 127 RQVNSIKFSPNGKYFASGSA-----DGSVKLWDTVSNRCFNTFANAHDG--SEVSSVAFT 285
R+++S F P + G+ + S++ + S+ T H G S+V SV +
Sbjct: 356 RKISSFSFCPTAPKESLGTLALSLNNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLS 415
Query: 286 RNSKYLLTSGLDSSIKLWELASSRCL 363
++ L+++ S +K+W ++ CL
Sbjct: 416 EDNTLLMSTS-HSEVKIWNPSTGSCL 440
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 53.6 bits (123), Expect = 8e-08
Identities = 37/147 (25%), Positives = 67/147 (45%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
++FHP I+AS VI+L+D H+ V + F + F SG
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLID---RFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D +K+W+ ++RC T D + +V F + +++++ D +I++W S C+
Sbjct: 72 DYKIKVWNYKTHRCLFTLLGHLD--YIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI- 128
Query: 367 QYTGAGTTGKQDHLAQAIFNHTEDYVL 447
+ TG ++ A F+ ED V+
Sbjct: 129 ----SVLTGHNHYVMCASFHPKEDLVV 151
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLT 309
+V + F P + + G ++LWD + F + H+G V V F + ++
Sbjct: 11 RVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHEG-PVRGVHFHNSQPLFVS 68
Query: 310 SGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVL-FPDEATTSLCTWH 486
G D IK+W + RCL G D++ F+H +++ D+ T + W
Sbjct: 69 GGDDYKIKVWNYKTHRCLFT-----LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 487 SRSASRCPLISLGHN 531
SR+ C + GHN
Sbjct: 124 SRT---CISVLTGHN 135
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/83 (31%), Positives = 38/83 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H R VN F P SG+ D VKLW + + + VSSV F
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 301 LLTSGLDSSIKLWELASSRCLIQ 369
++++ D SI++W+ A+ R IQ
Sbjct: 263 IVSNSEDKSIRVWD-ATKRTGIQ 284
Score = 41.1 bits (92), Expect = 5e-04
Identities = 28/123 (22%), Positives = 52/123 (42%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
+FHP I++ ++L+ + ++ + H V+S+ F S S D
Sbjct: 211 SFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT-LRGHMNNVSSVMFHAKQDIIVSNSED 269
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQ 369
S+++WD TF HD + +V N LL +G D+ + +++L R
Sbjct: 270 KSIRVWDATKRTGIQTFRREHDRFWILAVHPEIN---LLAAGHDNGMIVFKLERERPAFA 326
Query: 370 YTG 378
+G
Sbjct: 327 LSG 329
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FH I++++ IR+++ + C + + H+H V F P S S
Sbjct: 99 VQFHHENPWIVSASDDQTIRIWNWQSRTC-ISVLTGHNH--YVMCASFHPKEDLVVSASL 155
Query: 187 DGSVKLWD 210
D +V++WD
Sbjct: 156 DQTVRVWD 163
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 52.0 bits (119), Expect = 2e-07
Identities = 37/147 (25%), Positives = 66/147 (44%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
++FHP I+AS VI+L+D H+ V + F + F SG
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLID---RFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D +K+W+ ++RC T D + +V F +++++ D +I++W S C+
Sbjct: 72 DYKIKVWNYKNHRCLFTLLGHLD--YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCV- 128
Query: 367 QYTGAGTTGKQDHLAQAIFNHTEDYVL 447
+ TG ++ A F+ ED V+
Sbjct: 129 ----SVLTGHNHYVMCASFHPKEDLVV 151
Score = 51.2 bits (117), Expect = 4e-07
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLT 309
+V + F P + + G ++LWD + F + H+G V V F + ++
Sbjct: 11 RVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHEG-PVRGVHFHNSQPLFVS 68
Query: 310 SGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVL-FPDEATTSLCTWH 486
G D IK+W + RCL G D++ F+H +++ D+ T + W
Sbjct: 69 GGDDYKIKVWNYKNHRCLFT-----LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 487 SRSASRCPLISLGHN 531
SR+ C + GHN
Sbjct: 124 SRT---CVSVLTGHN 135
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/123 (24%), Positives = 52/123 (42%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
AFHP I++ ++L+ + ++ + H V+S+ F S S D
Sbjct: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT-LRGHMNNVSSVMFHAKQDIIVSNSED 269
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQ 369
S+++WD TF HD + +V N LL +G DS + +++L R
Sbjct: 270 KSIRVWDATKRTGLQTFRREHDRFWILAVHPEMN---LLAAGHDSGMIVFKLERERPAFA 326
Query: 370 YTG 378
+G
Sbjct: 327 LSG 329
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/83 (30%), Positives = 38/83 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H R VN F P SG+ D VKLW + + + VSSV F
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 301 LLTSGLDSSIKLWELASSRCLIQ 369
++++ D SI++W+ A+ R +Q
Sbjct: 263 IVSNSEDKSIRVWD-ATKRTGLQ 284
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V FH I++++ IR+++ + C V + H+H V F P S S
Sbjct: 99 VQFHHEYPWIVSASDDQTIRIWNWQSRTC-VSVLTGHNH--YVMCASFHPKEDLVVSASL 155
Query: 187 DGSVKLWD 210
D +V++WD
Sbjct: 156 DQTVRVWD 163
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
HH V+ + S +G S S D ++K+W T +C +F NAHD + +++VA + N
Sbjct: 163 HHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDA-INAVALSENGD 221
Query: 298 YLLTSGLDSSIKLW 339
+ T D IK+W
Sbjct: 222 -IYTGSSDQRIKVW 234
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGA 381
H VS +A +R+ L + D ++K+W +CL +T A
Sbjct: 163 HHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNA 206
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 121 HKRQVNSIKFS-PNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H +N++ S NG SG +DGS+ +W+ +E S + S
Sbjct: 258 HNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTE-SVLCLAVVSD 316
Query: 298 YLLTSGLDSSIKLWELASS--RCLIQYTG 378
L + D +++LW+ ++ CL G
Sbjct: 317 ILCSGSADKTVRLWKCSAKDYSCLAMLEG 345
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFA--NAHDGSEVSSVAFTRNSK-------YLLTSGLDSS 327
SGSAD +V+LW S + ++ A H G R+S+ ++ + GLDS
Sbjct: 320 SGSADKTVRLWKC-SAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQ 378
Query: 328 IKLWEL 345
+K+W++
Sbjct: 379 VKVWQV 384
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 51.2 bits (117), Expect = 4e-07
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = +1
Query: 4 CVAFHPLGD-HIIASTSHPVIRLYDVTT---SQCFVCPVPSHHHKRQVNSIKFS-PNGKY 168
C + P D H+I S+ L+DVTT + F S H V S+ S N +
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGH-TADVLSVSISGSNPNW 219
Query: 169 FASGSADGSVKLWDT-VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
F SGS D + +LWDT ++R TF + H+G +V++V F + T D + +L+++
Sbjct: 220 FISGSCDSTARLWDTRAASRAVRTF-HGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDI 277
Query: 346 ASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
+ L Y G G+ + F+ +LF A+ + C
Sbjct: 278 RTGHQLQVYQPHG-DGENGPVTSIAFS-VSGRLLFAGYASNNTC 319
Score = 36.7 bits (81), Expect = 0.010
Identities = 23/86 (26%), Positives = 43/86 (50%)
Frame = +1
Query: 97 VCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSV 276
VC H +V S+ ++P S S DG + +W+ ++++ T A + V +
Sbjct: 56 VCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTC 113
Query: 277 AFTRNSKYLLTSGLDSSIKLWELASS 354
AF+ N + + GLDS ++ L+S+
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSST 139
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 51.2 bits (117), Expect = 4e-07
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = +1
Query: 4 CVAFHPLGD-HIIASTSHPVIRLYDVTT---SQCFVCPVPSHHHKRQVNSIKFS-PNGKY 168
C + P D H+I S+ L+DVTT + F S H V S+ S N +
Sbjct: 99 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGH-TADVLSVSISGSNPNW 157
Query: 169 FASGSADGSVKLWDT-VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
F SGS D + +LWDT ++R TF + H+G +V++V F + T D + +L+++
Sbjct: 158 FISGSCDSTARLWDTRAASRAVRTF-HGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDI 215
Query: 346 ASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
+ L Y G G+ + F+ +LF A+ + C
Sbjct: 216 RTGHQLQVYQPHG-DGENGPVTSIAFS-VSGRLLFAGYASNNTC 257
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNR------CFNTFANAHDGSEVSSVAFTRN- 291
V + FSPNG+ A G D ++ S + H G VS + N
Sbjct: 48 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRG-YVSCCQYVPNE 106
Query: 292 SKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTS 471
+L+TS D + LW++ + + G +G + + + ++
Sbjct: 107 DAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDST 166
Query: 472 LCTWHSRSASRCPLISLGH 528
W +R+ASR GH
Sbjct: 167 ARLWDTRAASRAVRTFHGH 185
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 51.2 bits (117), Expect = 4e-07
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = +1
Query: 4 CVAFHPLGD-HIIASTSHPVIRLYDVTT---SQCFVCPVPSHHHKRQVNSIKFS-PNGKY 168
C + P D H+I S+ L+DVTT + F S H V S+ S N +
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGH-TADVLSVSISGSNPNW 219
Query: 169 FASGSADGSVKLWDT-VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
F SGS D + +LWDT ++R TF + H+G +V++V F + T D + +L+++
Sbjct: 220 FISGSCDSTARLWDTRAASRAVRTF-HGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDI 277
Query: 346 ASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
+ L Y G G+ + F+ +LF A+ + C
Sbjct: 278 RTGHQLQVYQPHG-DGENGPVTSIAFS-VSGRLLFAGYASNNTC 319
Score = 36.7 bits (81), Expect = 0.010
Identities = 23/86 (26%), Positives = 43/86 (50%)
Frame = +1
Query: 97 VCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSV 276
VC H +V S+ ++P S S DG + +W+ ++++ T A + V +
Sbjct: 56 VCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTC 113
Query: 277 AFTRNSKYLLTSGLDSSIKLWELASS 354
AF+ N + + GLDS ++ L+S+
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSST 139
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 51.2 bits (117), Expect = 4e-07
Identities = 32/100 (32%), Positives = 50/100 (50%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
+++A + L+D +T V K V SI ++P+G++ A G + V+LWD
Sbjct: 152 NVLAIALDHTVYLWDASTGSTSEL-VTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD 210
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSI 330
+ SNR T H S V S+A+ N+ L T G+D I
Sbjct: 211 SASNRQLRTLKGGHQ-SRVGSLAW--NNHILTTGGMDGLI 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LD 321
F N G D ++K W+T + C N + GS+V S+ +++N + LL+S
Sbjct: 325 FQANLLATGGGGGDRTIKFWNTHTGACLN---SVDTGSQVCSLLWSKNERELLSSHGFTQ 381
Query: 322 SSIKLWELASSRCLIQYTG 378
+ + LW+ S + + TG
Sbjct: 382 NQLTLWKYPSMVKMAELTG 400
Score = 35.1 bits (77), Expect = 0.030
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH----DGSEVSSVAFTR 288
H ++V +K+S +G+ ASG D V +WD +T H S V ++A+
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
Query: 289 NSKYLLTS---GLDSSIKLWELASSRCL 363
LL + G D +IK W + CL
Sbjct: 325 FQANLLATGGGGGDRTIKFWNTHTGACL 352
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 51.2 bits (117), Expect = 4e-07
Identities = 32/100 (32%), Positives = 50/100 (50%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
+++A + L+D +T V K V SI ++P+G++ A G + V+LWD
Sbjct: 142 NVLAIALDHTVYLWDASTGSTSEL-VTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD 200
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSI 330
+ SNR T H S V S+A+ N+ L T G+D I
Sbjct: 201 SASNRQLRTLKGGHQ-SRVGSLAW--NNHILTTGGMDGLI 237
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LD 321
F N G D ++K W+T + C N + GS+V S+ +++N + LL+S
Sbjct: 315 FQANLLATGGGGGDRTIKFWNTHTGACLN---SVDTGSQVCSLLWSKNERELLSSHGFTQ 371
Query: 322 SSIKLWELASSRCLIQYTG 378
+ + LW+ S + + TG
Sbjct: 372 NQLTLWKYPSMVKMAELTG 390
Score = 35.1 bits (77), Expect = 0.030
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH----DGSEVSSVAFTR 288
H ++V +K+S +G+ ASG D V +WD +T H S V ++A+
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
Query: 289 NSKYLLTS---GLDSSIKLWELASSRCL 363
LL + G D +IK W + CL
Sbjct: 315 FQANLLATGGGGGDRTIKFWNTHTGACL 342
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H +N++ SP+G ASG DG + LWD + + GS + S+ F+ N +Y
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK---KLYSLEAGSIIHSLCFSPN-RY 247
Query: 301 LLTSGLDSSIKLWELAS 351
L + ++SI++W+L S
Sbjct: 248 WLCAATENSIRIWDLES 264
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V + S +G++ SGS DG ++LWD + F H +V SVAF+ +++
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFV-GHT-KDVLSVAFSTDNRQ 119
Query: 301 LLTSGLDSSIKLW 339
++++ D +IKLW
Sbjct: 120 IVSASRDRTIKLW 132
Score = 45.2 bits (102), Expect = 3e-05
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 61 IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF 240
+RL+D+ T + V H + V S+ FS + + S S D ++KLW+T+ C T
Sbjct: 87 LRLWDLATGETTRRFVG---HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTI 142
Query: 241 ANAHDGSE-VSSVAFTRNS--KYLLTSGLDSSIKLWELASSRCLIQYTGAGTTG 393
+ E VS V F+ N+ ++++ D ++K+W L C ++ + G +G
Sbjct: 143 SEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL--QNCKLRNSLVGHSG 194
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = +1
Query: 61 IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF 240
+RL+D+ T + V H + V S+ FS + + S S D ++KLW+T+ C T
Sbjct: 87 LRLWDLATGESTRRFVG---HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTI 142
Query: 241 ANAHDGSE-VSSVAFTRNS--KYLLTSGLDSSIKLWELASSRCLIQYTGAGTTG 393
+ A E VS V F+ N+ ++++ D ++K+W L C ++ T AG +G
Sbjct: 143 SEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL--QNCKLRNTLAGHSG 194
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H +N++ SP+G ASG DG + LWD + + GS + S+ F+ N +Y
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK---KLYSLEAGSIIHSLCFSPN-RY 247
Query: 301 LLTSGLDSSIKLWELAS 351
L + ++SI++W+L S
Sbjct: 248 WLCAATENSIRIWDLES 264
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V + S +G++ SGS DG ++LWD + F H +V SVAF+ +++
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFV-GHT-KDVLSVAFSTDNRQ 119
Query: 301 LLTSGLDSSIKLW 339
++++ D +IKLW
Sbjct: 120 IVSASRDRTIKLW 132
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLY--DVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
V F P+ D + +++ +L+ D T Q F H ++ + F P+GKY +
Sbjct: 304 VVFSPVDDCLATASADRTAKLWKTDGTLLQTF------EGHLDRLARVAFHPSGKYLGTT 357
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
S D + +LWD ++ H S V +AF ++ + GLDS ++W+L + R
Sbjct: 358 SYDKTWRLWD-INTGAELLLQEGHSRS-VYGIAFQQDGALAASCGLDSLARVWDLRTGRS 415
Query: 361 LIQYTG 378
++ + G
Sbjct: 416 ILVFQG 421
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK + + FSP A+ SAD + KLW T TF D ++ VAF + KY
Sbjct: 297 HKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLD--RLARVAFHPSGKY 353
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L T+ D + +LW++ + L+ G
Sbjct: 354 LGTTSYDKTWRLWDINTGAELLLQEG 379
Score = 43.6 bits (98), Expect = 8e-05
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+AF G + + R++D+ T + + H + V S+ FSPNG + ASG
Sbjct: 387 IAFQQDGALAASCGLDSLARVWDLRTGRSILV---FQGHIKPVFSVNFSPNGYHLASGGE 443
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL-TSGLDSSIKLW 339
D ++WD + AH + VS V + Y L T+ D + +W
Sbjct: 444 DNQCRIWDLRMRKSLYIIP-AH-ANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +1
Query: 127 RQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSE-VSSVAFTRNSKYL 303
R + FS +GK A+ S G KLW+ + NT A D E + V F+ L
Sbjct: 256 RPLTGCSFSRDGKILATCSLSGVTKLWE--MPQVTNTIAVLKDHKERATDVVFSPVDDCL 313
Query: 304 LTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYV 444
T+ D + KLW+ + L+Q G D LA+ F+ + Y+
Sbjct: 314 ATASADRTAKLWK--TDGTLLQ----TFEGHLDRLARVAFHPSGKYL 354
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 241 ANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
+N D ++ +F+R+ K L T L KLWE+
Sbjct: 250 SNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEM 284
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/117 (25%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = +1
Query: 4 CVAFHPLGDHI-IASTS--HPVIRLYDVTTSQC-FVCPVPSHHHKRQVNSIKFSPNGKYF 171
CV F P I +A+T + ++D+ S F+C H+ V S+ + KY
Sbjct: 289 CVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFIC-----EHEEGVTSLTWIGTSKYL 343
Query: 172 ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
A+G A+G+V +WD++ C +T+ D V +++ + N+ ++++ +D++ +++E
Sbjct: 344 ATGCANGTVSIWDSLLGNCVHTYHGHQDA--VQAISVSTNTDFIVSVSVDNTARVFE 398
Score = 38.7 bits (86), Expect = 0.002
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
C F P G I + + +++ T + +H + + + N SGS
Sbjct: 202 CGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGS 261
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL---LTSGLDSSIKLWELASS 354
DGSV + + V+ + ++ N+H S V V F+ +S + T G+D + +W+L S
Sbjct: 262 KDGSVHIVNIVTGKVVSSL-NSHTDS-VECVKFSPSSATIPLAATGGMDKKLIIWDLQHS 319
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYF---ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
H V +KFSP+ A+G D + +WD + F H+ V+S+ +
Sbjct: 283 HTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST--PRFICEHEEG-VTSLTWIGT 339
Query: 292 SKYLLTSGLDSSIKLWELASSRCLIQYTG 378
SKYL T + ++ +W+ C+ Y G
Sbjct: 340 SKYLATGCANGTVSIWDSLLGNCVHTYHG 368
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/118 (16%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V +HP G ++A + + +++ + ++ H+ V F+P+GK +GS
Sbjct: 161 VRWHPRGHIVLAGSEDCSLWMWNAD-KEAYLNMFSGHN--LNVTCGDFTPDGKLICTGSD 217
Query: 187 DGSVKLWDTVSNRCFNTF-ANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
D S+ +W+ + + + + ++ + NS ++ D S+ + + + +
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGK 275
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 43.6 bits (98), Expect(2) = 1e-06
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD-TVSNRCFNTF 240
HK ++ ++KFSP+GKY A+G DG VK+W T+S+ +F
Sbjct: 197 HKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASF 237
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWD 210
+++++ +RL+ QC + HH V ++F+P N FASGS DG ++W
Sbjct: 286 LLSASKDKTVRLWRTGCDQC----LHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWG 341
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
R + + D +S++++ N + + + + +++
Sbjct: 342 LSEERVV-AWTDVRD--SISAISYQPNGNGFVVGCITGNCRFYQI 383
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 244 NAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
N H G ++ ++ F+ + KYL T G D +K+W + S L+
Sbjct: 195 NGHKG-KIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLL 234
Score = 25.4 bits (53), Expect(2) = 1e-06
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
H G +V +A++ +S LL++ D +++LW +CL
Sbjct: 271 HTG-DVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCL 306
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H R+V + + + F S D V WD + R F HDG EV++V F +S
Sbjct: 59 HGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKF-RGHDG-EVNAVKFNDSSSV 116
Query: 301 LLTSGLDSSIKLWELAS 351
++++G D S+++W+ S
Sbjct: 117 VVSAGFDRSLRVWDCRS 133
Score = 47.6 bits (108), Expect = 5e-06
Identities = 31/113 (27%), Positives = 52/113 (46%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
C++ G+ ++A +RL D TT + H K + + + GS
Sbjct: 189 CISISNDGNCVLAGCLDSTLRLLDRTTGELLQV-YKGHISKSFKTDCCLTNSDAHVIGGS 247
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
DG V WD V + + F AHD V+SV++ +LTS +D +I++W+
Sbjct: 248 EDGLVFFWDLVDAKVLSKF-RAHD-LVVTSVSYHPKEDCMLTSSVDGTIRVWK 298
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/86 (23%), Positives = 43/86 (50%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ V + +F+ +G Y + D +++LW+ T+ +H G EV V T ++
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTY-KSH-GREVRDVHVTSDNAK 74
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
+ G D + W++++ R + ++ G
Sbjct: 75 FCSCGGDRQVYYWDVSTGRVIRKFRG 100
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN 222
H +VN++KF+ + S D S+++WD S+
Sbjct: 101 HDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSH 134
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
GS DG+V+ +D R + + G V+ ++ + + +L LDS+++L + +
Sbjct: 162 GSVDGTVRTFDMRIGREMSD----NLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGE 217
Query: 358 CLIQYTG 378
L Y G
Sbjct: 218 LLQVYKG 224
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/122 (23%), Positives = 54/122 (44%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
HH V+S+ S +G S S D S K+W T +C ++ AHD + ++++ +++
Sbjct: 190 HHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDA-INAIVVSKDG- 247
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
++ T D IK+W + ++ T K A+ + VL+ S+
Sbjct: 248 FVYTGSADKKIKVWNKKDKK----HSLVATLTKHLSAVNALAISEDGKVLYSGACDRSIL 303
Query: 478 TW 483
W
Sbjct: 304 VW 305
Score = 35.5 bits (78), Expect = 0.023
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 11/138 (7%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN----RCFNTFANAHDGSEVSSVAFTR 288
H VN++ S +GK SG+ D S+ +W+ + N + A G + +
Sbjct: 277 HLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAV 336
Query: 289 NSKYLLTSGLDSSIKLW-----ELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDY--VL 447
S +L+ D S+++W E CL G K ++ + + DY ++
Sbjct: 337 ASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMV 396
Query: 448 FPDEATTSLCTWHSRSAS 501
+ SL W+ R +S
Sbjct: 397 YSGSLDLSLKVWNLRVSS 414
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.8 bits (111), Expect = 2e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V + S +G++ SGS DG ++LWD + F H +V SVAF+ +++
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHT-KDVLSVAFSLDNRQ 119
Query: 301 LLTSGLDSSIKLWE-LASSRCLIQYTGAG 384
++++ D +IKLW L + I G G
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEG 148
Score = 46.8 bits (106), Expect = 9e-06
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +1
Query: 4 CVAFHP--LGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
CV F P L I++++ ++++++ S C + + H V+++ SP+G AS
Sbjct: 155 CVRFSPNTLQPTIVSASWDKTVKVWNL--SNCKLRSTLAGH-TGYVSTVAVSPDGSLCAS 211
Query: 178 GSADGSVKLWDTV-SNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
G DG V LWD + ++ AN S + ++ F+ N +Y L + + IK+W+L S
Sbjct: 212 GGKDGVVLLWDLAEGKKLYSLEAN----SVIHALCFSPN-RYWLCAATEHGIKIWDLES 265
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK V S N AS SAD S KLWD ++ ++F + H V + AF++++KY
Sbjct: 60 HKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKH---IVRACAFSQDTKY 116
Query: 301 LLTSGLDSSIKLWEL 345
L+T G + +++++L
Sbjct: 117 LITGGFEKILRVFDL 131
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G+ +A +RL+D T + C + H V+ ++F+P G+ +ASGS DG++++
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGC---NKGHHGPVHCVRFAPTGESYASGSEDGTIRI 296
Query: 205 WDT 213
W T
Sbjct: 297 WQT 299
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 SHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
S HK V + FS + KY +G + ++++D T + GS + ++ +
Sbjct: 98 SFEHKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGS-IRTLTWLHG 156
Query: 292 SKYLLTSGLD-SSIKLWELASSR 357
+ +L+S D ++LW++ S +
Sbjct: 157 DQTILSSCTDIGGVRLWDVRSGK 179
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 48.4 bits (110), Expect = 3e-06
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+A + G +++ + V+R++D T + H V + G++ SGS+
Sbjct: 219 LAMNDTGTMLVSGGTEKVLRVWDPRTGSK---SMKLRGHTDNVRVLLLDSTGRFCLSGSS 275
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D ++LWD RC +T+A H S V ++A + ++ + G D + L +LA+ ++
Sbjct: 276 DSMIRLWDLGQQRCLHTYA-VHTDS-VWALACNPSFSHVYSGGRDQCLYLTDLATRESVL 333
Query: 367 QYT 375
T
Sbjct: 334 LCT 336
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = +1
Query: 103 PVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
P + HK V ++ + G SG + +++WD + D V +
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV--LLL 263
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
++ L+ DS I+LW+L RCL Y
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTY 293
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 151 SPNGKYFASGSADGSVKLW--DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDS 324
S + Y +GS DG++K W D + C TF + D V+ A S L++ D+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDW--VNDAALAGEST-LVSCSSDT 105
Query: 325 SIKLWE 342
++K W+
Sbjct: 106 TVKTWD 111
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 48.4 bits (110), Expect = 3e-06
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+A + G +++ + V+R++D T + H V + G++ SGS+
Sbjct: 219 LAMNDTGTMLVSGGTEKVLRVWDPRTGSK---SMKLRGHTDNVRVLLLDSTGRFCLSGSS 275
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
D ++LWD RC +T+A H S V ++A + ++ + G D + L +LA+ ++
Sbjct: 276 DSMIRLWDLGQQRCLHTYA-VHTDS-VWALACNPSFSHVYSGGRDQCLYLTDLATRESVL 333
Query: 367 QYT 375
T
Sbjct: 334 LCT 336
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = +1
Query: 103 PVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
P + HK V ++ + G SG + +++WD + D V +
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV--LLL 263
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
++ L+ DS I+LW+L RCL Y
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTY 293
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 151 SPNGKYFASGSADGSVKLW--DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDS 324
S + Y +GS DG++K W D + C TF + D V+ A S L++ D+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDW--VNDAALAGEST-LVSCSSDT 105
Query: 325 SIKLWE 342
++K W+
Sbjct: 106 TVKTWD 111
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPN-GKYFASGSADGSVKLWDTV-SNRCFNTFANAHDGSEVSSVAFTRNS 294
H + V++I+F P G S D VK+WD S +C T+ V + F+ +
Sbjct: 281 HTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMG--HAKAVRDICFSNDG 338
Query: 295 KYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSL 474
LT+G D +IK W+ + + + + +TGK ++ + + + +L + +
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTF----STGKIPYVVKLNPDDDKQNILLAGMSDKKI 394
Query: 475 CTW 483
W
Sbjct: 395 VQW 397
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
+ F P H++ S ++++DV S C H + V I FS +G F +
Sbjct: 288 IRFFPKQGHLLLSAGMDCKVKIWDVYNSG--KCMRTYMGHAKAVRDICFSNDGSKFLTAG 345
Query: 184 ADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
D ++K WDT + + +TF+ V LL D I W++ +
Sbjct: 346 YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVT 405
Query: 364 IQY 372
+Y
Sbjct: 406 QEY 408
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 142 IKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD 321
+ FSP+G++ SG +G WD S + F T H+G + + + T G D
Sbjct: 508 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHNGVCIGAEWHPLEQSKVATCGWD 566
Query: 322 SSIKLWE 342
IK W+
Sbjct: 567 GLIKYWD 573
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 48.0 bits (109), Expect = 4e-06
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCF-VCPVPSHHHKRQVNSIKFSPNGKYFA-SG 180
+A HP G +S+ +R++DV T+ V P +V ++F P G A +G
Sbjct: 66 LAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPS----EVWGMQFEPKGTILAVAG 121
Query: 181 SADGSVKLWDTVSNRCFNTFA----NAHDGSE-------VSSVAFTRNSKYLLTSGLDSS 327
+ SVKLWDT S R +T + +A S+ V SVA++ N K L +D +
Sbjct: 122 GSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGT 181
Query: 328 IKLWELASSRCLIQYTG 378
I ++++ S+ L Q G
Sbjct: 182 ICVFDVDRSKLLHQLEG 198
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
H V S+ SP+G A+GS+D +V+LWD T +N +D +V SVAF
Sbjct: 242 HTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHND--QVWSVAF 293
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
K+ V S+ +SPNGK A GS DG++ ++D ++ + H+ V S+ F+ +
Sbjct: 158 KKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQL-EGHN-MPVRSLVFSPVDPRV 215
Query: 304 LTSGLD 321
L SG D
Sbjct: 216 LFSGSD 221
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 115 HHHKRQVNSIKFSPNGK-YFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
H + V ++ FS +G+ ASG + G + +W+ R + +AHD S + S+ F N
Sbjct: 221 HASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHD-SSIISLNFLAN 279
Query: 292 SKYLLTSGLDSSIKLW 339
L+++ D+S+K+W
Sbjct: 280 EPVLMSASADNSLKMW 295
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+ +H + + VIRLYDV T + H ++ + FS +GK+ S S
Sbjct: 521 IVYHRVNGLLATVADDFVIRLYDVVTLKMVR---EFRGHTDRITDLCFSEDGKWVISSSM 577
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD-SSIKLW 339
DGS+++WD + + + H +++++ + N L T+ D + + LW
Sbjct: 578 DGSLRIWDVILAKQID---GVHVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/86 (33%), Positives = 44/86 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V S+ + P SG D VKLWDT S R + + H + V SV + +N +
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSL-HGHK-NIVLSVKWNQNGNW 324
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
LLT+ D IKL+++ + + L + G
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRG 350
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
V +HP +++ +++L+D T S +C + H HK V S+K++ NG + + S
Sbjct: 274 VDWHPTKSLLVSGGKDQLVKLWD-TRSGRELCSL--HGHKNIVLSVKWNQNGNWLLTASK 330
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF-TRNSKYLLTSGLDSSIKLW 339
D +KL+D + + +F H +V+S+A+ + +Y ++ D SI W
Sbjct: 331 DQIIKLYDIRTMKELQSF-RGHT-KDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
+N + ++P+G+ +GS G LW+ S F AHD + S+ ++ N Y+++
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFN-FEMILQAHD-QPIRSMVWSHNENYMVSG 183
Query: 313 GLDSSIKLWE 342
++K W+
Sbjct: 184 DDGGTLKYWQ 193
Score = 33.9 bits (74), Expect = 0.069
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 17/103 (16%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD---TVSNRCFNTF--------------ANA 249
HK + + F F S S D +VK+WD V + NA
Sbjct: 206 HKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNA 265
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
G +V SV + L++ G D +KLW+ S R L G
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHG 308
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 47.2 bits (107), Expect = 7e-06
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Frame = +1
Query: 4 CVAFHP-LGDHIIASTSHPVIRLYDVTT--SQCFVC-PVPSHHHKRQVNSIKFSPNGKYF 171
C +HP + ++ S+ +R++DV SQ V P + + V + + +GK
Sbjct: 283 CGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRI 342
Query: 172 ASGSADGSVKLWDTV---SNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
A G DGS+++W +R AH +++SV F+ + + LL+ D S+K+W+
Sbjct: 343 AGGVGDGSIQIWSLKPGWGSRPDIYVGKAHT-DDITSVKFSSDGRILLSRSFDGSLKVWD 401
Query: 343 L 345
L
Sbjct: 402 L 402
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD-TVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H + S+KFS +G+ S S DGS+K+WD F + ++VAF+ + +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 298 YLLT 309
+LT
Sbjct: 432 IILT 435
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTR-NSK 297
H +V I +S + Y S S D +V+LW SN C FA+ S V+SV F N
Sbjct: 327 HTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVFAH---NSYVTSVQFNPVNEN 382
Query: 298 YLLTSGLDSSIKLWELA 348
Y ++ +D +++W ++
Sbjct: 383 YFMSGSIDGKVRIWNIS 399
Score = 34.3 bits (75), Expect = 0.052
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR 225
H + ++KFS +GK+ AS DG V++W V ++
Sbjct: 220 HDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/38 (34%), Positives = 29/38 (76%)
Frame = +1
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
H G EV +++++++ YLL++ +D +++LW++ S+ CL
Sbjct: 327 HTG-EVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCL 362
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +1
Query: 247 AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
AHDG+ + ++ F+ + K+L +SG D +++W++ +
Sbjct: 219 AHDGA-ILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHD-GSEVSSVAFT--RN 291
H+ V + F P+ +GSADG +++WDT+ +R ++ A AH + V +VA +
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSS-AWAHSRANGVLAVAASPWLG 74
Query: 292 SKYLLTSGLDSSIKLWEL 345
+++ G D ++K W++
Sbjct: 75 EDKIISQGRDGTVKCWDI 92
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
+H+ N++ +SP+ + AS S D +V LW
Sbjct: 348 YHRATCNAVSYSPDCELMASASEDATVALW 377
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +1
Query: 142 IKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD 321
I P G+YFA GSAD V LWD C TF V +++F + +Y+ ++ D
Sbjct: 197 IAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLE--WPVRTISFNYSGEYIASASED 254
Query: 322 SSIKLWELASSRCLIQ 369
I + + + R + Q
Sbjct: 255 LFIDIANVQTGRTVHQ 270
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTV---SNRCFNTFANAHDGSEVSSVAFTRN 291
HK++V+S+ ++ NG ASGS D + ++W+ ++ + H S ++
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKH 78
Query: 292 SKYLLTSGLDSSIKLWELASSRCLIQYTGAG----TTGKQDHLAQAIFNHTEDYVL 447
S + T+ D S++LW+ S +C Q +G T K D A+ N ++ +
Sbjct: 79 SDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTI 134
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
C+A P G + ++ ++ L+D++ +C + V +I F+ +G+Y AS S
Sbjct: 196 CIAIDPKGRYFAVGSADSLVSLWDISD---MLCLRTFTKLEWPVRTISFNYSGEYIASAS 252
Query: 184 AD 189
D
Sbjct: 253 ED 254
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Frame = +1
Query: 34 IIASTSHPVIRLYD-------VTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
+IA +++ ++LYD VTTS + Q+ S+ + + F +
Sbjct: 503 VIAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSK 562
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL-TSGLDSSIKLWELASSRCLIQ 369
V L+D FAN H ++ V F+ +S +L TS D +KLW+L
Sbjct: 563 DVALYDIGRGTRLQVFANMHQ-EHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPC 621
Query: 370 YTGAGTTG 393
YT + T G
Sbjct: 622 YTASSTKG 629
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/100 (30%), Positives = 49/100 (49%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
+++A + L+D ++ + V + V SI ++ +G A G + V+LWD
Sbjct: 104 NVLAIALGDTVYLWDASSGSTYKL-VTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWD 162
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSI 330
VSNR T H+ S V S+A+ N+ L T G+D I
Sbjct: 163 CVSNRQVRTLRGGHE-SRVGSLAW--NNHILTTGGMDGKI 199
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LDSSIKLWELAS 351
G DG +K W+T + C N + GS+V S+ ++++ + LL+S + + LW+ S
Sbjct: 288 GVGDGKIKFWNTHTGACLN---SVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPS 344
Query: 352 SRCLIQYTG 378
+ + G
Sbjct: 345 MVKMAELNG 353
Score = 34.7 bits (76), Expect = 0.039
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFN-TFANAHDGSE----VSSVAFT 285
H +V +K+S +GK ASG D V +WD S N T H E V ++A+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 286 RNSKYLLTSG---LDSSIKLWELASSRCL 363
LL +G D IK W + CL
Sbjct: 277 PFQASLLATGGGVGDGKIKFWNTHTGACL 305
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +1
Query: 130 QVNSIKFSPNGKY-FASGSADGSVKLWDTVSNRCFNTF-ANAHDGSEVSSVAFTRNSKYL 303
+V + + P+ ++ F DG+VK +DT ++ +F +AHD SEVSS+++ ++ L
Sbjct: 302 KVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHD-SEVSSISYNIHAPNL 360
Query: 304 LTSG-LDSSIKLWELASSR 357
L +G D S+KLW+L++++
Sbjct: 361 LATGSADESVKLWDLSNNQ 379
Score = 37.5 bits (83), Expect = 0.006
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 7 VAFHPLGDH-IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNG-KYFASG 180
+A+ P +H + S ++ +D S + H H +V+SI ++ + A+G
Sbjct: 306 LAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFI-IHAHDSEVSSISYNIHAPNLLATG 364
Query: 181 SADGSVKLWDTVSNR 225
SAD SVKLWD +N+
Sbjct: 365 SADESVKLWDLSNNQ 379
Score = 34.7 bits (76), Expect = 0.039
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 157 NGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG 315
N ASGS D VK+WD + +C T H +V +VA+ + +L SG
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTM--EHHEKKVHAVAWNNYTPEVLLSG 276
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSH--HHKRQVNSIKFSPN-GKYFASGSADGSV 198
+++ +S +++L+DVTT Q SH H+++ S+ FS ASGS D SV
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAI-----SHFIEHEKRAWSVDFSEACPTKLASGSDDCSV 821
Query: 199 KLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG 315
KLW+ C T N + V V F+ S +LL G
Sbjct: 822 KLWNINERNCLGTIRNI---ANVCCVQFSPQSSHLLAFG 857
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 166 YFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDS-SIKLWE 342
Y AS DG VKLWD + + + F H+ SV F+ L SG D S+KLW
Sbjct: 768 YLASSDYDGIVKLWDVTTGQAISHFIE-HE-KRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Query: 343 LASSRCL 363
+ CL
Sbjct: 826 INERNCL 832
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +1
Query: 139 SIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH-------DGSEVSSVAFTRNSK 297
S+ F + YFA+ +K+++ N FN + H + S++S V + +
Sbjct: 709 SLGFDRDEDYFATAGVSKKIKIYEF--NSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIR 766
Query: 298 -YLLTSGLDSSIKLWELASSRCLIQY 372
YL +S D +KLW++ + + + +
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHF 792
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDT---VSNRCFNTFANAHDGSEVSSVAFTRN 291
H ++NS+ +SPN K A+GS D V +++ S+R T NAH G V++VAF +
Sbjct: 398 HTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRI--TARNAHLGG-VNAVAFIDD 454
Query: 292 SKYLLTSGLDSSIKLWEL 345
+ +SG D+S++LW +
Sbjct: 455 CT-VASSGEDASVRLWHI 471
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +1
Query: 19 PLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSV 198
P G I + +Y V+ H+ + I++SP+ FASG A+
Sbjct: 321 PDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREA 380
Query: 199 KLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL---ASSR 357
+WD + + H + ++S+A++ N+K + T +D+ + ++E+ ASSR
Sbjct: 381 VVWDRETKQVKLNNMLFHT-ARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSR 435
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
C+ + P G I +S +YD T HK + ++ +SP+ K + S
Sbjct: 56 CIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVS 115
Query: 184 ADGSVKLWDTVSN 222
AD S K+W+ +
Sbjct: 116 ADKSAKVWEVAED 128
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/98 (28%), Positives = 51/98 (52%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
H++++ I+L+D+ C + + + N+I S +G SG DG+++LWD
Sbjct: 330 HVVSAAYDRTIKLWDLHKGYCTNTVLFTSN----CNAICLSIDGLTVFSGHMDGNLRLWD 385
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDS 324
+ + + A S V+SV+ +RN +LTSG D+
Sbjct: 386 IQTGKLLSEVAG--HSSAVTSVSLSRNGNRILTSGRDN 421
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/99 (25%), Positives = 48/99 (48%)
Frame = +1
Query: 100 CPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVA 279
C H H+ SI F N +G D +VK+WDT S + + + +A
Sbjct: 223 CANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSL--GNILDMA 280
Query: 280 FTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGK 396
T ++K ++ + +++ +W+++S R +++T G T K
Sbjct: 281 VTHDNKSVIAATSSNNLFVWDVSSGR--VRHTLTGHTDK 317
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/115 (21%), Positives = 55/115 (47%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDT 213
+IA+TS + ++DV++ + V+ KFS ++ S + D ++KLWD
Sbjct: 288 VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFS--SRHVVSAAYDRTIKLWDL 345
Query: 214 VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
C NT S +++ + + + + +D +++LW++ + + L + G
Sbjct: 346 HKGYCTNTVLFT---SNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAG 397
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQ-CFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVK 201
G+ I+ S V ++D T + C + + SP+ Y A+GSADGSV
Sbjct: 411 GNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVH 470
Query: 202 LW 207
+W
Sbjct: 471 VW 472
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 61 IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF 240
+RL+D+ T + + V H V S+ S NG + D ++DT + T
Sbjct: 381 LRLWDIQTGK-LLSEVAGH--SSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTL 437
Query: 241 ANAHD--GSEVSSVAFTRNSKYLLTSGLDSSIKLWELA 348
+ + S S + + Y+ D S+ +W L+
Sbjct: 438 RASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLS 475
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWD 210
+++ +I L++ + V P+P H V +++SP FAS S DGSV +WD
Sbjct: 239 LLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWD 298
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD 321
+ AH+ ++V+ +++ R + +L SG D
Sbjct: 299 IRLGKSPALSFKAHN-ADVNVISWNRLASCMLASGSD 334
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H +QV S+ FSPNG + ASG D ++WD + R AH + VS V + +Y
Sbjct: 171 HIKQVLSVDFSPNGYHLASGGEDNQCRIWD-LRMRKLLYIIPAH-VNLVSQVKYEPQERY 228
Query: 301 LL-TSGLDSSIKLW 339
L T+ D ++ +W
Sbjct: 229 FLATASHDMNVNIW 242
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCP-VPSHHHKRQVNSIKFSPNGKYFASGSAD 189
F + ++I+ + L+D S C+ V V SI ++ +G A G +
Sbjct: 116 FVDIEEYIVIEQLGDTVYLWDA--SSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDN 173
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSI 330
V++WD VSNR T H+ S V S+A+ N+ L T G+D I
Sbjct: 174 SEVQVWDCVSNRHVRTLRGGHE-SRVGSLAW--NNHILTTGGMDGKI 217
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LDSSIKLWELAS 351
G DG + W+T + C N + GS+V S+ ++++ + LL++ + + LW+ S
Sbjct: 305 GVGDGKINFWNTHTGACLN---SVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPS 361
Query: 352 SRCLIQYTG 378
+ + G
Sbjct: 362 MVKMAELNG 370
Score = 32.3 bits (70), Expect = 0.21
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSE----VSSVAFTR 288
H +V +K+S +GK ASG D V +WD T H E V ++A+
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCP 294
Query: 289 NSKYLLTSG---LDSSIKLWELASSRCL 363
LL +G D I W + CL
Sbjct: 295 FQASLLATGGGVGDGKINFWNTHTGACL 322
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN---RCFNTFANAHDGSEVSSVAFTRN 291
H +V ++FS NGKY AS S D + +W+ ++ +T H V ++ ++ +
Sbjct: 273 HTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHH--KPVIAILWSPD 330
Query: 292 SKYLLTSGLDSSIKLWELASSRCLIQYTGAG 384
+ +LT G + I+ W++ S C+ Y G
Sbjct: 331 DRQVLTCGAEEVIRRWDVDSGDCVHMYEKGG 361
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVT--TSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
++P G IIA + I ++D+ +C+ ++V+ I + +GK+ S
Sbjct: 369 WYPDGQGIIAGMTDRSICMWDLDGREKECW-----KGQRTQKVSDIAMTDDGKWLVSVCK 423
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL-ASSRCL 363
D + L+D + D ++S + + ++KY+L + L+ I+LW + + +
Sbjct: 424 DSVISLFDREAT--VERLIEEED--MITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIV 479
Query: 364 IQYTG 378
+Y G
Sbjct: 480 SRYKG 484
Score = 31.9 bits (69), Expect = 0.28
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYF-ASGSADGSVKLW 207
+I+ + + IRL+++ V H R + F + F ASGS D V +W
Sbjct: 457 YILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIW 516
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGL-DSSIKLWEL 345
+ + H G+ V+ V+++ + ++L S D +I++W L
Sbjct: 517 HRSTGKLIVELP-GHAGA-VNCVSWSPTNLHMLASASDDGTIRIWGL 561
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 139 SIKFSPNGKYFASGSADGSVKLWDTVSNR-CFNTFANAHDGSEVSSVAFTRNSKYLLTSG 315
S+KFS +G+ +GS+D S+ ++D +NR T A+ S+V++V F S L+ SG
Sbjct: 234 SVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHT---SDVNTVCFADESGNLILSG 290
Query: 316 LDSSI-KLWELASSRCLI 366
D ++ K+W+ RC I
Sbjct: 291 SDDNLCKVWD---RRCFI 305
Score = 44.4 bits (100), Expect = 5e-05
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGS 183
V F G ++A +S I +YD+ ++ + V H VN++ F+ +G SGS
Sbjct: 235 VKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVA---HTSDVNTVCFADESGNLILSGS 291
Query: 184 ADGSVKLWDTVSNRCF---NTFANAHDG--SEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
D K+WD RCF + A G V+ + + +Y +++G D +IKLW++
Sbjct: 292 DDNLCKVWD---RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHP-VIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKY-FAS 177
CV ++ + +AST + V++++D T Q F H+++ S+ FSP+ F S
Sbjct: 770 CVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFS---QYTEHQKRAWSVDFSPSDPTKFVS 826
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG 315
GS D SVKLW R T + + V V F+ S +LL G
Sbjct: 827 GSDDCSVKLWSINEKRSLGTIWSP---ANVCCVQFSSYSNHLLAFG 869
Score = 30.3 bits (65), Expect = 0.85
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH-------DGSEVSSVAFTRN 291
V S+ F P+ ++ A+ +K++D N N H + S++S V +
Sbjct: 719 VCSLSFDPDEEHIAAAGISKKIKIFDF--NAFMNESVGVHYPLVEMVNKSKLSCVCWNSY 776
Query: 292 SK-YLLTSGLDSSIKLWELASSRCLIQYT 375
K YL ++ D +++W+ + + QYT
Sbjct: 777 IKNYLASTDYDGVVQIWDAGTGQGFSQYT 805
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 44.4 bits (100), Expect = 5e-05
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPS-------HHHKRQVNSIKFSPN 159
L V FHP+ + + + I+L+ + + Q VPS +H VN+I+FSP+
Sbjct: 17 LTVDFHPISGLLATAGADYDIKLWLINSGQAEK-KVPSVSYQSSLTYHGCAVNTIRFSPS 75
Query: 160 GKYFASGSADGSVKLW---DTVSNRCFNTFAN-AHDGSEVSSVAFTRNSKYLLTSGLDSS 327
G+ ASG+ G + +W + +N+ + + + +V + ++ + YL++ +D+S
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 328 IKLWEL 345
+W++
Sbjct: 136 CIIWDV 141
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/92 (26%), Positives = 46/92 (50%)
Frame = +1
Query: 64 RLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFA 243
+L+ T+Q + H++ V +++SP+ Y SGS D S +WD V+ +
Sbjct: 92 KLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD-VNKGSVHQIL 150
Query: 244 NAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
+AH V VA+ +KY+ + D + +++
Sbjct: 151 DAH-CHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
HDG V +V F S L T+G D IKLW + S +
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQ 46
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 112 SHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFAN-------AHDGSEVS 270
S H + V ++ F P A+ AD +KLW S + + + G V+
Sbjct: 9 SWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVN 68
Query: 271 SVAFTRNSKYLLTSGLD-SSIKLWELASS 354
++ F+ + + LL SG D + +W+L S
Sbjct: 69 TIRFSPSGE-LLASGADGGELFIWKLHPS 96
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 44.4 bits (100), Expect = 5e-05
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPS-------HHHKRQVNSIKFSPN 159
L V FHP+ + + + I+L+ + + Q VPS +H VN+I+FSP+
Sbjct: 17 LTVDFHPISGLLATAGADYDIKLWLINSGQAEK-KVPSVSYQSSLTYHGCAVNTIRFSPS 75
Query: 160 GKYFASGSADGSVKLW---DTVSNRCFNTFAN-AHDGSEVSSVAFTRNSKYLLTSGLDSS 327
G+ ASG+ G + +W + +N+ + + + +V + ++ + YL++ +D+S
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 328 IKLWEL 345
+W++
Sbjct: 136 CIIWDV 141
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/92 (26%), Positives = 46/92 (50%)
Frame = +1
Query: 64 RLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFA 243
+L+ T+Q + H++ V +++SP+ Y SGS D S +WD V+ +
Sbjct: 92 KLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD-VNKGSVHQIL 150
Query: 244 NAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
+AH V VA+ +KY+ + D + +++
Sbjct: 151 DAH-CHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
HDG V +V F S L T+G D IKLW + S +
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQ 46
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 112 SHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFAN-------AHDGSEVS 270
S H + V ++ F P A+ AD +KLW S + + + G V+
Sbjct: 9 SWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVN 68
Query: 271 SVAFTRNSKYLLTSGLD-SSIKLWELASS 354
++ F+ + + LL SG D + +W+L S
Sbjct: 69 TIRFSPSGE-LLASGADGGELFIWKLHPS 96
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTT---SQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
+ A TS I ++ TT S F H +V F+ G+ SGS D ++K+
Sbjct: 225 LFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIKM 282
Query: 205 WDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
WD + +C T H G+ S + + K L++S LD +IK+W + + L
Sbjct: 283 WDLNTLQCIMTL-KQHTGTVTSLLCW---DKCLISSSLDGTIKVWAYSENGIL 331
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFA--NAHDGSEVSSVAFTRNSKYL 303
QVN++ + NG FA G++ GS+ +W ++ + F + +G F + L
Sbjct: 214 QVNAMTIA-NGMLFA-GTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQML 271
Query: 304 LTSGLDSSIKLWELASSRCLI---QYTGAGTT 390
+ +D +IK+W+L + +C++ Q+TG T+
Sbjct: 272 YSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTS 303
Score = 32.7 bits (71), Expect = 0.16
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF-ANAHDGSEVSSVAFTRNSK 297
H +++ I S S DG++++WD S +C ++ +A GS +S +
Sbjct: 130 HNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWV---- 185
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLC 477
+L GL ++IK + + +S+ L AG G+ + A I N +LF ++ S+
Sbjct: 186 FL---GLPNAIKAFNVQTSQDL-HLQAAGVVGQVN--AMTIANG----MLFAGTSSGSIL 235
Query: 478 TWHSRSAS 501
W + + S
Sbjct: 236 VWKATTDS 243
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 44.4 bits (100), Expect = 5e-05
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDV-TTSQCFVCPVPSHHH-KRQVNSIKFSPNGKYFASG 180
+ F ++I+ ++ I+ +DV T S P+ S+++ K +VN + + + AS
Sbjct: 64 LCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASA 123
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY-LLTSGLDSSIKLWELASSR 357
G VK+ D + +C A S SSV F + ++T GLDS + LW+ + R
Sbjct: 124 DDSGDVKIID-LGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGR 182
Query: 358 C--LIQYTGAGTTGKQDHLAQAIFNHT 432
+I + G+ T F H+
Sbjct: 183 SQKIIDF-GSDTNNNSGQCLNPAFVHS 208
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
HH +V F G+ SGS D ++K+WD + +C T H G+ S + + K
Sbjct: 310 HHSGEVTC--FVVGGEVLYSGSVDKTIKVWDLNTLQCRMTL-KQHIGTVTSLLCW---DK 363
Query: 298 YLLTSGLDSSIKLWELASSRCL 363
L++S LD +IKLW + + L
Sbjct: 364 CLISSSLDGTIKLWACSENESL 385
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF-ANAHDGSEVS 270
HK + I S S DG++ +WD S +C + A GS +S
Sbjct: 186 HKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLIS 236
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
K V SI ++ +G A G + V+LWD VSNR T H+ S V S+A+ N+ L
Sbjct: 165 KGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHE-SRVGSLAW--NNHIL 221
Query: 304 LTSGLDSSI 330
T G+D I
Sbjct: 222 TTGGMDGKI 230
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LDSSIKLWELAS 351
G DG +K W+T + C N + GS+V S+ +++ + LL+S + + LW+ S
Sbjct: 319 GVGDGKIKFWNTHTGACLN---SVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPS 375
Query: 352 SRCLIQYTG 378
+ + G
Sbjct: 376 MSKMAELNG 384
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD---TVSNRCFNTFANAHD--GSEVSSVAFT 285
H +V +K+S +GK ASG V +WD S++ + + + + V ++A+
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWC 307
Query: 286 RNSKYLLTSG---LDSSIKLWELASSRCL 363
LL +G D IK W + CL
Sbjct: 308 PFQATLLATGGGVGDGKIKFWNTHTGACL 336
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 44.4 bits (100), Expect = 5e-05
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 6/166 (3%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
CV F P G I +S +YD T + HK + ++ +SP+GK + S
Sbjct: 192 CVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVS 251
Query: 184 ADGSVKLWDTVSN--RCFNTFAN---AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELA 348
AD S K+WD N NT N + G + V + +++T L +I ++ +
Sbjct: 252 ADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVSLGGTISIFSAS 311
Query: 349 S-SRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTW 483
+ Q++G ++ + A+ DY+L +C W
Sbjct: 312 DLDKSPFQFSG----HMKNVSSLAVLKGNADYIL-SGSYDGLICKW 352
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ ++ I++SP+ FAS + +WD VS R + + ++ +A++ NS
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVS-REMKLKNMLYHSARINCLAWSPNSTM 548
Query: 301 LLTSGLDSSIKLWEL---ASSRCLIQ 369
+ T LD+ + ++E+ ASSR I+
Sbjct: 549 VATGSLDTCVIVYEVDKPASSRMTIK 574
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW 207
H ++SPNG++ ASG G+V++W
Sbjct: 55 HAYPATVARYSPNGEWIASGDVSGTVRIW 83
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/110 (22%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLW 207
H+++S+ +RL+++++ C + H V I+F+P + +YF SGS D V++W
Sbjct: 526 HLLSSSMDKTVRLWNLSSQTC----LKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVW 581
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
++ +R + + H+ V+S +T + + +L S +++ + ++
Sbjct: 582 -SIPDRQVVDWYDLHE--MVTSACYTPDGQGVLVGSYKGSCRMYSASDNK 628
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/50 (34%), Positives = 33/50 (66%)
Frame = +1
Query: 214 VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
+S + F +F D +V +A+++ S++LL+S +D +++LW L+S CL
Sbjct: 501 LSEKPFCSFQGHVD--DVLDLAWSK-SQHLLSSSMDKTVRLWNLSSQTCL 547
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTV 216
H + SIKFS +GKY AS D + +W V
Sbjct: 412 HNGSIWSIKFSLDGKYLASAGEDCIIHIWQVV 443
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 247 AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
AH+GS + S+ F+ + KYL ++G D I +W++ +
Sbjct: 411 AHNGS-IWSIKFSLDGKYLASAGEDCIIHIWQVVEA 445
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSP-NGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H++++ +F P + S+D +++ D N + S S + T + K
Sbjct: 645 HQKKITGFQFVPGSSSEVLVTSSDSRIRVVDGTD--LVNKLKGFRNTSSQISASITADGK 702
Query: 298 YLLTSGLDSSIKLWELAS 351
Y++++ DS + +W+ S
Sbjct: 703 YVVSASEDSHVYIWKYES 720
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK V S N AS SAD S KLWD ++ ++F + H V + AF+ ++K
Sbjct: 60 HKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKH---IVRACAFSEDTKS 116
Query: 301 LLTSGLDSSIKLWEL 345
LLT G + ++++++
Sbjct: 117 LLTGGFEKILRVFDM 131
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G+ +A +R++D T + C + H V+ ++F+P G +ASGS DG++++
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGC---NKGHHGPVHCVRFTPTGLSYASGSEDGTIRI 296
Query: 205 WDT 213
W T
Sbjct: 297 WQT 299
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK V S N AS SAD S KLWD ++ ++F + H V + AF+ ++K
Sbjct: 60 HKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKH---IVRACAFSEDTKS 116
Query: 301 LLTSGLDSSIKLWEL 345
LLT G + ++++++
Sbjct: 117 LLTGGFEKILRVFDM 131
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G+ +A +R++D T + C + H V+ ++F+P G +ASGS DG++++
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGC---NKGHHGPVHCVRFTPTGLSYASGSEDGTIRI 296
Query: 205 WDT 213
W T
Sbjct: 297 WQT 299
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 44.0 bits (99), Expect = 6e-05
Identities = 31/127 (24%), Positives = 57/127 (44%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
AF P G +I S +D+ ++ ++ + + S + A +
Sbjct: 295 AFLPNGSQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNE 354
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQ 369
G + L T + T +GS V S+AF+ + K+LL+SG D + +W+L + +CL +
Sbjct: 355 GYILLVSTKTKELIGTLKM--NGS-VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYK 411
Query: 370 YTGAGTT 390
G+T
Sbjct: 412 GVDEGST 418
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 241 ANAHDGSE--VSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
ANA D S ++SV F +N++ LLT+GLD ++ +++ R
Sbjct: 237 ANAADPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKR 277
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQ---CFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
++A++ ++L+DV+ C + PS VNS+K++ AS D + L
Sbjct: 12 LLAASGGDTVKLFDVSADSGDPCVLSYTPSPGCA--VNSVKWNHTNLVVASTGEDKKISL 69
Query: 205 WDTVSNRCFNTFANAHDGSE-----VSSVAFTRN-SKYLLTSGLDSSIKLWELASSRCLI 366
W DG + +S+++F++ S+Y+ + G +K+W+L C+
Sbjct: 70 WRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIK 129
Query: 367 QYTGAGTT 390
+ G +T
Sbjct: 130 KLKGHTST 137
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
DG+V LWDT ++ H N K + + G+D + ++ S R
Sbjct: 200 DGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDSGSRR 256
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
K V SI ++ +G A G + V+LWD VSNR T H+ S V S+A+ ++ L
Sbjct: 168 KGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHE-SRVGSLAW--DNHIL 224
Query: 304 LTSGLDSSI 330
T G+D I
Sbjct: 225 TTGGMDGKI 233
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG--LDSSIKLWELAS 351
G DG +K W+T + C N + GS+V S+ ++++ + LL+S + + LW+ S
Sbjct: 321 GVGDGKIKFWNTHTGACLN---SVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPS 377
Query: 352 SRCLIQYTG 378
+ + G
Sbjct: 378 MSKMAELNG 386
Score = 31.9 bits (69), Expect = 0.28
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSE----VSSVAFTR 288
H +V +K+S +G ASG D V +WD T H E V ++A+
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCP 310
Query: 289 NSKYLLTSG---LDSSIKLWELASSRCL 363
LL +G D IK W + CL
Sbjct: 311 FQASLLATGGGVGDGKIKFWNTHTGACL 338
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
+ + F+ G A+G ADG +WD + + + ++SV++++ LL S
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 313 GLDSSIKLWELAS----SRCLIQYT 375
D S+ LW++++ +R ++Q T
Sbjct: 86 AADKSLTLWDVSTGEKIARTILQQT 110
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSS 327
F+ G G++ G + + D S R +A + V ++ F+RN +YLLT+ D +
Sbjct: 181 FNKCGDLVYIGNSKGEILIVDYKSVRVL-ALVSASGAAPVKNIVFSRNGQYLLTNSHDRT 239
Query: 328 IKLWE 342
I+++E
Sbjct: 240 IRIYE 244
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTV-SNRCFNTFANAHDGSEVSSVAFTRNSK 297
HK +V ++FS +GKY A+ S+D + +W + N+ + VS V+++ +
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYT-GAGTTG 393
LLT G +KLW++ + ++++T G TG
Sbjct: 283 KLLTCGNAEVLKLWDVDTG--VLRHTFGNNNTG 313
Score = 36.3 bits (80), Expect = 0.013
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNG-KYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H+ V+ + +SP+ K G+A+ +KLWD + +TF N + G VSS A+ +S
Sbjct: 268 HQNPVSFVSWSPDDTKLLTCGNAE-VLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDST 326
Query: 298 YLL--TSGLDSSIKLWE 342
L+ +S + I +W+
Sbjct: 327 RLVCGSSDPERGIVMWD 343
Score = 31.5 bits (68), Expect = 0.37
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+A P G+ +I S IR+ ++ T V V S ++ + S+ S +GK+F +
Sbjct: 363 LAVTPDGESMITVFSDKEIRILNLETK---VERVISE--EQPITSLSISGDGKFFIVNLS 417
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSE--VSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
+ LWD + H S+ + S +S ++ + DS + +W L +++
Sbjct: 418 CQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKP 477
Query: 361 LIQYTGAGTT 390
L +G T
Sbjct: 478 LEVLSGHSMT 487
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWD 210
+++S+ +RL+D+ T C + H V ++F+P + YF SGS D +++W+
Sbjct: 533 LLSSSMDKTVRLWDIETQSC----LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Query: 211 TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYT 375
+SNR + + + V++V +T + + ++ +L+ ++ C ++ T
Sbjct: 589 -ISNRQVVEWNDLKE--MVTAVCYTPDGQAAFVGSINGHCRLY--SAEDCKLEQT 638
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 262 EVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
+V ++++R S+ LL+S +D +++LW++ + CL
Sbjct: 521 DVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCL 553
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
+H R+ ++ S +G+Y A+G D V +WD + F + VS + F +
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHR--NTVSCLCFRYGTS 277
Query: 298 YLLTSGLDSSIKLWELASSRCLIQYTG 378
L + D ++K+W + + + G
Sbjct: 278 ELYSGSFDRTVKVWNVEDKAFITENHG 304
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
VN++ S ASG+ +G V+LW +N + G V+S+AF ++ K+L+
Sbjct: 418 VNAVATSRGSDLAASGAGNGFVRLWAVETNAIRPLYELPLTGF-VNSLAFAKSGKFLIAG 476
Query: 313 -GLDSSIKLW 339
G ++ W
Sbjct: 477 VGQETRFGRW 486
Score = 31.1 bits (67), Expect = 0.48
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 17/107 (15%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF-----------------ANA 249
H+R V S+ S + S S DG++ WD S + N
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTT 390
+ E ++A + + +YL T G+D + +W++ + + + G T
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNT 266
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 169 FASGSADGSVKLWDTVSNRCFNTFANAH 252
+ SGS +G+V LW + + F NAH
Sbjct: 360 YLSGSDNGTVALWGMLKKKPVFVFKNAH 387
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 100 CPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTF 240
C + H V SI +G++ ASGS DGSV++W+ + RC +
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVW 461
Score = 33.9 bits (74), Expect = 0.069
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +1
Query: 220 NRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
N C+ + H G+ V+S++ + +++ + D S+++WE+ + RCL
Sbjct: 413 NSCYLEY-KGHTGA-VTSISTDSSGEWIASGSTDGSVRMWEVETGRCL 458
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +1
Query: 115 HHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
H + +NSI FS +G Y A+ DG ++++D S + ++ G+ + A++ +
Sbjct: 300 HIGQGAINSIAFSNDGAYLATVGRDGYLRIFD-FSTQKLVCGVKSYYGA-LLCCAWSMDG 357
Query: 295 KYLLTSGLDSSIKLWEL 345
KYLLT G D +++W +
Sbjct: 358 KYLLTGGEDDLVQVWSM 374
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H + I+FSP+ A+ S D +V++WD N+ ++ S V+S+ F
Sbjct: 692 HTAMITDIRFSPSQLRLATSSFDKTVRVWD-ADNKGYSLRTFMGHSSMVTSLDFHPIKDD 750
Query: 301 LLTS-GLDSSIKLWELASSRCLIQYTGAGT 387
L+ S D+ I+ W + + C Y G T
Sbjct: 751 LICSCDNDNEIRYWSINNGSCTRVYKGGST 780
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+ F P +A++S ++ + DV T H +NS+ + P+G + AS S
Sbjct: 782 IRFQPRVGKYLAASSANLVNVLDVETQ---AIRHSLQGHANPINSVCWDPSGDFLASVSE 838
Query: 187 DGSVKLWDT---VSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
D VK+W C + + +G++ S F LL G S++LW ++ ++
Sbjct: 839 D-MVKVWTLGTGSEGECVHEL--SCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENK 895
Query: 358 CL 363
+
Sbjct: 896 TM 897
Score = 33.9 bits (74), Expect = 0.069
Identities = 24/95 (25%), Positives = 40/95 (42%)
Frame = +1
Query: 58 VIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNT 237
V R DV+ F +V FS +GK AS D LW T + + T
Sbjct: 629 VTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKP-KT 687
Query: 238 FANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
H + ++ + F+ + L TS D ++++W+
Sbjct: 688 TLEEHT-AMITDIRFSPSQLRLATSSFDKTVRVWD 721
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +1
Query: 19 PLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSV 198
PL I++ VIR++D T + HK+ + S+ + + +F +GS D +
Sbjct: 158 PLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTA 217
Query: 199 KLWDTVSNRCFNTFANAHDGSEVS 270
KLWD + T+ + VS
Sbjct: 218 KLWDMRTLTLLKTYTTVVPVNAVS 241
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 103 PVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
P+ H+R + ++++ G S + D + LW + T+ H+G+ V
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTY-RGHNGA-VWCCDV 60
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
+R+S L+T D + KLW++ S + L +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTF 90
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +1
Query: 19 PLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSV 198
PL I++ VIR++D T + HK+ + S+ + + +F +GS D +
Sbjct: 158 PLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTA 217
Query: 199 KLWDTVSNRCFNTFANAHDGSEVS 270
KLWD + T+ + VS
Sbjct: 218 KLWDMRTLTLLKTYTTVVPVNAVS 241
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 103 PVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
P+ H+R + ++++ G S + D + LW + T+ H+G+ V
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTY-RGHNGA-VWCCDV 60
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
+R+S L+T D + KLW++ S + L +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTF 90
Score = 33.5 bits (73), Expect = 0.091
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKL 204
H +N++ F+P+GK F+SG DG V+L
Sbjct: 289 HFGPINALAFNPDGKSFSSGGEDGYVRL 316
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +1
Query: 19 PLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSV 198
PL I++ VIR++D T + HK+ + S+ + + +F +GS D +
Sbjct: 158 PLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTA 217
Query: 199 KLWDTVSNRCFNTFANAHDGSEVS 270
KLWD + T+ + VS
Sbjct: 218 KLWDMRTLTLLKTYTTVVPVNAVS 241
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 103 PVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
P+ H+R + ++++ G S + D + LW + T+ H+G+ V
Sbjct: 3 PILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTY-RGHNGA-VWCCDV 60
Query: 283 TRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
+R+S L+T D + KLW++ S + L +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTF 90
Score = 33.5 bits (73), Expect = 0.091
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKL 204
H +N++ F+P+GK F+SG DG V+L
Sbjct: 289 HFGPINALAFNPDGKSFSSGGEDGYVRL 316
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +1
Query: 121 HKRQVNSIKFSP-NGKYFASGSADGSVKLWD--TVSNRCFNTFANAHDGSEVSSVAFTRN 291
H+R++NSI F+P N A+ S DG+ LWD ++ + T + + V S F+ +
Sbjct: 347 HERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPS 406
Query: 292 SKYLLTSGLDSSIKLWELAS--SRCLIQY 372
L T+ LD+ I + A+ + C+I +
Sbjct: 407 GLSLATTSLDNYIGVLSGANFENTCMIYH 435
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHP-VIRLYDVTTSQCFVCPVPSH-HHKRQVNSIKFSPNGKYFASG 180
+ F+P H++A++S L+D+ + S +H R V+S FSP+G A+
Sbjct: 354 IDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATT 413
Query: 181 SADGSV 198
S D +
Sbjct: 414 SLDNYI 419
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/86 (24%), Positives = 44/86 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H QV+ +K +G+ + + DG+VK+WD ++ C T S + S+ + ++
Sbjct: 938 HDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCVATVGRC--SSAILSLEYDDSTGI 994
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L +G D+ +W++ S + + + G
Sbjct: 995 LAAAGRDTVANIWDIRSGKQMHKLKG 1020
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
D +I + R++ V+ C H V S+++SP K +GSADG ++ W
Sbjct: 1033 DTLITGSDDWTARVWSVSRGSCDAVLAC---HAGPVQSVEYSPFDKGIITGSADGLLRFW 1089
Query: 208 D 210
+
Sbjct: 1090 E 1090
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 YFASGSADGSVKLWD-TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
+F SGS D VK+WD ++ H G+ V +++ R +++ D S+ +W+
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGT-VRAISSDRGK--IVSGSDDLSVIVWD 925
Query: 343 LASSRCLIQYTG 378
+++ L + G
Sbjct: 926 KQTTQLLEELKG 937
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLW 207
H+++S+ +RL+D+++ C + H V I+F+P + YF SGS D V++W
Sbjct: 481 HLLSSSMDKTVRLWDLSSKTC----LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW 536
Score = 34.3 bits (75), Expect = 0.052
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN 222
HK + SIKFS +G+Y AS D +++W V +
Sbjct: 362 HKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVES 395
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 292 SKYLLTSGLDSSIKLWELASSRCL 363
S++LL+S +D +++LW+L+S CL
Sbjct: 479 SQHLLSSSMDKTVRLWDLSSKTCL 502
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 247 AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
AH GS + S+ F+ + +YL ++G D I++W++ S
Sbjct: 361 AHKGS-IWSIKFSLDGRYLASAGEDCVIQIWKVVES 395
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN-RCFNTFANAHDGSEVSSVAFTRNS 294
HHK+ + + SAD ++ D V F F N + S++S+ + T N
Sbjct: 600 HHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKFKGFRNTN--SQISA-SLTSNG 656
Query: 295 KYLLTSGLDSSIKLWELAS 351
K+L+++ DS++ +W S
Sbjct: 657 KFLVSASEDSNVYVWNYDS 675
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/104 (26%), Positives = 46/104 (44%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
GS DG+ +W+ + + SEV SV++ + L T G D S+ +WE+
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 358 CLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWHS 489
T A TG + + +++ T D VLF ++ W S
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTMD-VLFSCSYDNTIKIWCS 168
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ V F +G+Y +GS D VK+W + C + H+G +++ +A + N+
Sbjct: 304 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS-CRGHEG-DITDLAVSSNNAL 361
Query: 301 LLTSGLDSSIKLWEL 345
+ ++ D I++W L
Sbjct: 362 VASASNDFVIRVWRL 376
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 280 FTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
F R+ +Y++T D +K+W + ++ CL G
Sbjct: 313 FDRSGRYVITGSDDRLVKIWSMETALCLASCRG 345
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ VN++ + ASG G VK+WDT C + F NAH+ +S + F +S
Sbjct: 36 HEDAVNTL-INVTETTIASGDDKGCVKIWDTRQRSCSHEF-NAHE-DYISGMTFASDSMK 92
Query: 301 LLTSGLDSSIKLWELASSR 357
L+ + D ++ + L +S+
Sbjct: 93 LVVTSGDGTLSVCNLRTSK 111
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
+G +G + L + NR + HD + +A + + K+L ++ DS +KLW L
Sbjct: 180 TGCDNGIISLVGILPNRIIQPIGS-HD-YPIEDLALSHDKKFLGSTAHDSMLKLWNL 234
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS--EVSSVAFTRNS 294
H ++++ + +GS DG+ ++WD + +C + S VSS+A +
Sbjct: 200 HSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSE 259
Query: 295 KYLLTSGLDSSIKLWELASSRCL 363
+L+ G ++ LW L +S C+
Sbjct: 260 SWLV-CGQGKNLALWNLPASECV 281
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
K + +I++S +GK F S D VK+W S RC NT + VS+VA + + ++
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSE---KRVSAVAISSDDSHV 119
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRC-----FNTFANAHDGSEVSSVAF 282
H+ + S++FSP+G+Y S D +++ +F H ++ AF
Sbjct: 153 HYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHS-EFITCTAF 211
Query: 283 TRNSK----YLLTSGLDSSIKLWELASSRCL 363
+ YL++ DS+++LW++ S L
Sbjct: 212 VSTPELTQGYLMSGSGDSTVRLWDITSGSLL 242
Score = 30.7 bits (66), Expect = 0.64
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 142 IKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDG----SEVSSVAFTRNSKYLLT 309
I P+ K A + ++++D + N C + + DG + ++ ++ + K ++
Sbjct: 23 ISVHPSQKSVAV-AVGSDLRIFDLIEN-CPVSLVDESDGPIRKESIRAIRYSTSGKLFVS 80
Query: 310 SGLDSSIKLWELASSRCL 363
+G D +K+W S RCL
Sbjct: 81 AGDDKLVKIWSADSWRCL 98
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 166 YFASGSADGSVKLWDTVSNRCFNT 237
Y SGS D +V+LWD S +T
Sbjct: 221 YLMSGSGDSTVRLWDITSGSLLDT 244
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/90 (30%), Positives = 44/90 (48%)
Frame = +1
Query: 70 YDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANA 249
Y+ TTS CF H V S+ N Y SG+ D S+K+W + +C T
Sbjct: 250 YNSTTS-CFDPAASLLGHTLAVVSLYVGANRLY--SGAMDNSIKVWSLDNLQCIQTLTE- 305
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
H +S + + ++LL+ LD+++K+W
Sbjct: 306 HTSVVMSLICW---DQFLLSCSLDNTVKIW 332
Score = 35.5 bits (78), Expect = 0.023
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNR-CFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
+G+ DGS+ +W S CF+ A+ G ++ V+ + L + +D+SIK+W L +
Sbjct: 238 AGTQDGSILVWRYNSTTSCFDPAASLL-GHTLAVVSLYVGANRLYSGAMDNSIKVWSLDN 296
Query: 352 SRCL 363
+C+
Sbjct: 297 LQCI 300
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWD 210
+++S+ +RL+D+ T C + H V I+FSP + YF SGS D +++W
Sbjct: 520 LLSSSMDKTVRLWDIETKTC----LKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIW- 574
Query: 211 TVSNRCFNTFANAHD 255
++ +R +++ H+
Sbjct: 575 SIQDRHVVEWSDLHE 589
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTR-NSKYLLTSGLDSSIKLWEL 345
S S D +V+LWD + C FA+ V+ + F+ + Y L+ LD+ I++W +
Sbjct: 522 SSSMDKTVRLWDIETKTCLKLFAH---NDYVTCIQFSPVDENYFLSGSLDAKIRIWSI 576
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVT------TSQCFVCPVPSHHHKRQVNSIKFSP-NGKYF 171
+ P G + + + R YD T+Q V KR++ S +FSP N
Sbjct: 596 YTPDGQGALIGSHKGICRAYDTEDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEV 655
Query: 172 ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
SAD +++ D + + F + S +++++ KY++ + DS + LW+
Sbjct: 656 LVTSADSRIRILD--GSEVIHKFKGFRNTCSQLSASYSQDGKYIICASEDSQVYLWK 710
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
H+ V +IKFS + Y ASG AD + +W+
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWE 432
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 292 SKYLLTSGLDSSIKLWELASSRCL 363
S+ LL+S +D +++LW++ + CL
Sbjct: 517 SQLLLSSSMDKTVRLWDIETKTCL 540
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK VN++ + +G SGS D S+ +W+ + A G + + ++ S
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSDL 338
Query: 301 LLTSGLDSSIKLW 339
LL+ D ++++W
Sbjct: 339 LLSGSADRTVRIW 351
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK V S N AS SAD + K+W+ ++ ++F + H V + AF+ ++
Sbjct: 55 HKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKH---IVRACAFSEDTHR 111
Query: 301 LLTSGLDSSIKLWEL 345
LLT G++ +++++L
Sbjct: 112 LLTGGMEKILRIFDL 126
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G+ IA + +D T + C + H V+ ++++P G+ + SGS DG+V++
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGC---NKGHHGPVHCVRYAPGGESYTSGSEDGTVRI 291
Query: 205 W 207
W
Sbjct: 292 W 292
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNG-KYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H+ V+ + +PN K S S DG ++LWD S R F H G+ V + + +
Sbjct: 55 HRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-GHQGA-VRGLTASTDGN 112
Query: 298 YLLTSGLDSSIKLWEL 345
L++ G D +++LW +
Sbjct: 113 VLVSCGTDCTVRLWNV 128
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 115 HHHKR--QVNSIKFSPNGKYFASGSADGSVKLW 207
+H KR +V +K+S + Y SGS D +++LW
Sbjct: 317 YHTKRMQRVFCVKYSCDATYVISGSDDTNLRLW 349
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH--DGSEVSSVAFTRNS 294
H+ VN+++F+ G SGS D + LW+ +S ++ + H + + + FT +
Sbjct: 54 HEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT-DD 112
Query: 295 KYLLTSGLDSSIKLWEL 345
+ ++TSG D ++L ++
Sbjct: 113 RTIITSGADGQVRLGQI 129
Score = 35.1 bits (77), Expect = 0.030
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 115 HHHKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
H + + V + F PN +Y SGS G + +W + A D V+ + +
Sbjct: 317 HRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVR--AMVGDRRVVNQLESHPH 374
Query: 292 SKYLLTSGLDSSIKLWELASSRCL 363
L + G++ S+KLW S+ L
Sbjct: 375 IPLLASCGIEKSVKLWTPMSNDVL 398
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
+R VN ++ P+ AS + SVKLW +SN + E++ V S+
Sbjct: 363 RRVVNQLESHPHIPLLASCGIEKSVKLWTPMSNDVLSLPEKIDKVMELNRVGREDQSRVT 422
Query: 304 LT 309
LT
Sbjct: 423 LT 424
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/106 (22%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLW 207
++++S+ +RL+ V +C + + H V + F+P + YF SGS DG V++W
Sbjct: 335 YLLSSSVDETVRLWRVGCDEC----LRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
D R + + + D V++V + ++K + + + + + +
Sbjct: 391 DVTRCRVVD-YTDIRD--IVTAVCYRPDAKGAVIGSMTGNCRFYHI 433
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEV 267
H + ++KFSP+GKY AS D V++W +T+ A S V
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGV 265
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +1
Query: 199 KLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
K + +S+ C + +AHDGS + ++ F+ + KY+ ++G D +++W +
Sbjct: 200 KQFKELSSMCIDQEFSAHDGS-ILAMKFSPDGKYIASAGEDCVVRVWSI 247
Score = 33.5 bits (73), Expect = 0.091
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 4 CVAFHPLGD-HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQ-VNSIKFSPNGKYFAS 177
CVAF+P+ D + I+ + +R++DVT C V + R V ++ + P+ K
Sbjct: 367 CVAFNPVDDNYFISGSIDGKVRIWDVTR-----CRVVDYTDIRDIVTAVCYRPDAKGAVI 421
Query: 178 GSADGSVKLWDTVSNRC-FNTFANAHDGSEVSS 273
GS G+ + + N+ + N H +V+S
Sbjct: 422 GSMTGNCRFYHIFENQLQMDQEINVHGKKKVAS 454
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTV---SNRCFNTFANAHDGSEVSSVAFTRNSKY 300
++N+ K + S V L T+ S + + F H G E+ ++++ Y
Sbjct: 279 KINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEF-KGHIG-EILDLSWSEKG-Y 335
Query: 301 LLTSGLDSSIKLWELASSRCLIQYT 375
LL+S +D +++LW + CL +T
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTFT 360
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/106 (22%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLW 207
++++S+ +RL+ V +C + + H V + F+P + YF SGS DG V++W
Sbjct: 335 YLLSSSVDETVRLWRVGCDEC----LRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Query: 208 DTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
D R + + + D V++V + ++K + + + + + +
Sbjct: 391 DVTRCRVVD-YTDIRD--IVTAVCYRPDAKGAVIGSMTGNCRFYHI 433
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEV 267
H + ++KFSP+GKY AS D V++W +T+ A S V
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGV 265
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +1
Query: 199 KLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
K + +S+ C + +AHDGS + ++ F+ + KY+ ++G D +++W +
Sbjct: 200 KQFKELSSMCIDQEFSAHDGS-ILAMKFSPDGKYIASAGEDCVVRVWSI 247
Score = 33.5 bits (73), Expect = 0.091
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 4 CVAFHPLGD-HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQ-VNSIKFSPNGKYFAS 177
CVAF+P+ D + I+ + +R++DVT C V + R V ++ + P+ K
Sbjct: 367 CVAFNPVDDNYFISGSIDGKVRIWDVTR-----CRVVDYTDIRDIVTAVCYRPDAKGAVI 421
Query: 178 GSADGSVKLWDTVSNRC-FNTFANAHDGSEVSS 273
GS G+ + + N+ + N H +V+S
Sbjct: 422 GSMTGNCRFYHIFENQLQMDQEINVHGKKKVAS 454
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTV---SNRCFNTFANAHDGSEVSSVAFTRNSKY 300
++N+ K + S V L T+ S + + F H G E+ ++++ Y
Sbjct: 279 KINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEF-KGHIG-EILDLSWSEKG-Y 335
Query: 301 LLTSGLDSSIKLWELASSRCLIQYT 375
LL+S +D +++LW + CL +T
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTFT 360
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+ FH ++ ++ IRLYDV ++ C + + S + + P ++S +
Sbjct: 39 IDFHKTSTCMVTASDDDSIRLYDVASATC-LKTINSKKYGVDLVCFTSHPTTVIYSSRNG 97
Query: 187 -DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
D S++L N+ F HD V S++ + ++ LD ++ LW+ +C
Sbjct: 98 WDDSLRLLSLHDNKYLRYFKGHHD--RVVSLSLCSGGECFISGSLDRTVLLWDQRVEKC 154
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFA-NAHDGSEVSSVAFTRNSKYLL 306
+ N +KFS +G+ + DG + + D+ +TF+ G AF+ +++
Sbjct: 207 EANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVV 266
Query: 307 TSGLDSSIKLWELASSRCLIQYTGAGT 387
+ D S W + S + + + G G+
Sbjct: 267 SGSGDGSTHAWGVRSGKQVHSWMGLGS 293
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSS 327
FSP G + SGS DGS W S + +++ GSE + + S +T + +
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGL--GSEPPVIKWGPGSPMFVTGSSELA 315
Query: 328 IKLWELA 348
+ +L+
Sbjct: 316 FVIPDLS 322
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+ FH ++ ++ IRLYDV ++ C + + S + + P ++S +
Sbjct: 36 IDFHKTSTCMVTASDDDSIRLYDVASATC-LKTINSKKYGVDLVCFTSHPTTVIYSSRNG 94
Query: 187 -DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC 360
D S++L N+ F HD V S++ + ++ LD ++ LW+ +C
Sbjct: 95 WDDSLRLLSLHDNKYLRYFKGHHD--RVVSLSLCSGGECFISGSLDRTVLLWDQRVEKC 151
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFA-NAHDGSEVSSVAFTRNSKYLL 306
+ N +KFS +G+ + DG + + D+ +TF+ G AF+ +++
Sbjct: 204 EANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVV 263
Query: 307 TSGLDSSIKLWELASSRCLIQYTGAGT 387
+ D S W + S + + + G G+
Sbjct: 264 SGSGDGSTHAWGVRSGKQVHSWMGLGS 290
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSS 327
FSP G + SGS DGS W S + +++ GSE + + S +T + +
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGL--GSEPPVIKWGPGSPMFVTGSSELA 312
Query: 328 IKLWELA 348
+ +L+
Sbjct: 313 FVIPDLS 319
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/92 (26%), Positives = 46/92 (50%)
Frame = +1
Query: 64 RLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFA 243
+L+ T+Q + H++ V +++SP+ Y SGS D S +WD V+ +
Sbjct: 33 KLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD-VNKGSVHQIL 91
Query: 244 NAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
+AH V VA+ +KY+ + D + +++
Sbjct: 92 DAH-CHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 106 VPSHHHKRQVNSIKFS-PNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
+ +H R V+SI ++ A+GS D SVKLWD +N + + V S++F
Sbjct: 398 IQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISF 457
Query: 283 TRNSKYLLT-SGLDSSIKLWE 342
++ +LL G + +W+
Sbjct: 458 AVDNPFLLAIGGSKGELHVWD 478
Score = 34.3 bits (75), Expect = 0.052
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 172 ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSG 315
AS SAD VK+WD + C T H EV +VA+ + +L SG
Sbjct: 282 ASASADKKVKVWDVATGTCKITM--EHHTKEVQAVAWNHYAPEVLLSG 327
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Frame = +1
Query: 133 VNSIKFSPNGKY-FASGSADGSVKLWDTVS---------NRCFNTFANAHDGSEVSSVAF 282
V S+ + P+ ++ F DG+VK +D + N + A+A D VSS+++
Sbjct: 354 VESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRG-VSSISY 412
Query: 283 TRNSKYLLTSG-LDSSIKLWELASS 354
++ LL +G +D S+KLW+L+++
Sbjct: 413 NISTPNLLATGSMDKSVKLWDLSNN 437
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP--NGKYFASGSADGSV 198
G + A + +RLYDV + + VC H +V + F P + S S G +
Sbjct: 1183 GGQLAAGFADGSLRLYDVRSPEPLVCATRPHQKVERVVGLSFQPGLDPAKVVSASQAGDI 1242
Query: 199 KLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRC-LIQY 372
+ D + R +AH GS ++++A R++ + + IK++ L + +I+Y
Sbjct: 1243 QFLDLRTTRDTYLTIDAHRGS-LTALAVHRHAPIIASGSAKQLIKVFSLQGEQLGIIRY 1300
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 31 HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
++ AS + L+D+ Q V VPS +G A+G ADGS++L+D
Sbjct: 1141 YLYASGETSTVTLWDLEKEQ-LVRSVPSESECGVTALSASQVHGGQLAAGFADGSLRLYD 1199
Query: 211 TVS 219
S
Sbjct: 1200 VRS 1202
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
+ FHP + + A + LY + V HK +++F +G+ + SA
Sbjct: 12 IDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTASA 71
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSS-IKLWELASSRCL 363
D S+ D + NAH+ + + + T + + SG D +K+W+ C
Sbjct: 72 DCSILATDVETGAQVAHLENAHEDAVNTLINVTETT---IASGDDKGCVKIWDTRQRSCS 128
Query: 364 IQYTGAGTTGKQDHLAQAIF-NHTEDYVLFPDEATTSLC 477
++ +D+++ F + + V+ + T S+C
Sbjct: 129 HEF-----NAHEDYISGMTFASDSMKLVVTSGDGTLSVC 162
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
+G +G + L + NR + HD + +A + + K+L ++ DS +KLW L
Sbjct: 237 TGCDNGIISLVGILPNRIIQPIGS-HD-YPIEDLALSHDKKFLGSTAHDSMLKLWNL 291
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ V +G+Y +GS D VK+W + C + H+G +++ +A + N+ +
Sbjct: 244 HRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLAS-CRGHEG-DITDLAVSSNNIF 301
Query: 301 LLTSGLDSSIKLWEL 345
+ ++ D I++W L
Sbjct: 302 IASASNDCVIRVWRL 316
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 286 RNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
R+ +Y++T D +K+W + ++ CL G
Sbjct: 255 RSGRYVITGSDDRLVKVWSMDTAYCLASCRG 285
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 160 GKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
G+Y ASGS DG +W+ + R D S ++ + + TSG+D++IK+W
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVG--DESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Query: 340 ELASS 354
+S
Sbjct: 691 SPTAS 695
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ VN++ ++ NG SGS D + +W+ S + ++ H + + S
Sbjct: 49 HQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDE 108
Query: 301 LLTSGL-DSSIKLW 339
L+ SG D+ ++L+
Sbjct: 109 LVVSGAGDAEVRLF 122
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIK----FSPNGKY 168
+ V+ HP GD+ + STS +L+++ + + Q ++ FS +G
Sbjct: 77 VAVSVHPGGDYFVCSTSKGGCKLFELVGGATGITILAKELLPLQNAGLQKCMAFSFDGSK 136
Query: 169 FASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
A G DG +++ + + AH + + F+ +S++L T+ D S ++W+
Sbjct: 137 LAVGGVDGCLRIMEWPNLSVILDEPKAH--KSIRDMDFSLDSEFLATTSTDGSARIWK 192
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/86 (23%), Positives = 44/86 (51%)
Frame = +1
Query: 55 PVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFN 234
P++ +YD++T + S ++ +++ S +GKY A G DG V + + + ++
Sbjct: 234 PMVNVYDISTWKKLGFKKLS---RKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYH 290
Query: 235 TFANAHDGSEVSSVAFTRNSKYLLTS 312
H G ++S+ F + + +LT+
Sbjct: 291 YSKRLHLGQSIASLEFCPSERVMLTT 316
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
C+AF G + +R+ + + + P H + + + FS + ++ A+ S
Sbjct: 127 CMAFSFDGSKLAVGGVDGCLRIME-WPNLSVILDEPKAH--KSIRDMDFSLDSEFLATTS 183
Query: 184 ADGSVKLWDTVSNRCFNTFANAHD 255
DGS ++W +T + D
Sbjct: 184 TDGSARIWKAEDGFPLSTLERSGD 207
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H + I + + S D ++K+WD N+C H G+ S + NS
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLI-GHTGTVKSMCSHPTNSDL 185
Query: 301 LLTSGLDSSIKLWEL 345
L++ D LW+L
Sbjct: 186 LVSGSRDGCFALWDL 200
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 151 SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS-KYLLTSGLDSS 327
SP+G+Y SGS+DG+ +W + HD EV++V ++ + + T+ D +
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHD-FEVTAVDWSPSEIGKVATASDDFT 405
Query: 328 IKLWELASSRC 360
++LW + ++ C
Sbjct: 406 VRLWNIENNIC 416
Score = 36.3 bits (80), Expect = 0.013
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 19 PLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPN--GKYFASGSADG 192
P G+++++ +S ++ V Q V P+ H +V ++ +SP+ GK A+ S D
Sbjct: 348 PDGEYVLSGSSDGNAYIWQVNKPQ--VDPIILKGHDFEVTAVDWSPSEIGKV-ATASDDF 404
Query: 193 SVKLWDTVSNRCFNTFANA 249
+V+LW+ +N C N A A
Sbjct: 405 TVRLWNIENNICTNANATA 423
Score = 33.9 bits (74), Expect = 0.069
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 16/98 (16%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSE-------------VSS 273
V+ K S N + FA DG V L+++ S + F + A + +E +
Sbjct: 75 VSFCKTSRNSQLFAVSDEDGHVSLFNSSSKK-FASSATHQENTEKARFRDWIAHYNAIFD 133
Query: 274 VAFTRNSKYLLTSGLDSSIKLWELASSRC---LIQYTG 378
+++ + LLT+ D +IK+W++ ++C LI +TG
Sbjct: 134 ISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTG 171
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
K + + ++ +P G + G+V +W S H G VSSVAF N +
Sbjct: 239 KGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQM-QCHPGP-VSSVAFHPNGHLM 296
Query: 304 LTSGLDSSIKLWEL 345
TSG + IK+W+L
Sbjct: 297 ATSGKERKIKIWDL 310
Score = 33.5 bits (73), Expect = 0.091
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V+S+ F PNG A+ + +K+WD R F H +++F++ K
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDL---RKFEEVQTIH-SFHAKTLSFSQ--KG 333
Query: 301 LLTSGLDSSIKLWELASSRCLIQYT 375
LL +G S +++ +S YT
Sbjct: 334 LLAAGTGSFVQILGDSSGGSSHNYT 358
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGK----YFASGSADGSVK 201
I S S ++LY T Q + H VN I FS + S S+DG+++
Sbjct: 56 IAVSLSTNTVKLYSPVTGQYYG---ECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIR 112
Query: 202 LWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
WDT S + + +D E+ S ++ + LL G + LW+ +S+
Sbjct: 113 SWDTRSFQQVSRIDTGND-QEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN-RC 228
H+ + ++KFSP+G+Y AS DG +++W V + RC
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC 286
Score = 35.9 bits (79), Expect = 0.017
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKL 204
+ +++++ +RL+ + C + H V S++F+P + +F SGS DG V++
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDC----LGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRI 423
Query: 205 WDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
W + + +A+A V++V + + + ++ L S + + + S CL
Sbjct: 424 WSASQCQVVD-WADAR--GIVTAVCYQPDGQAVIIGTLTSDCRFYNV-SGHCL 472
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 247 AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELA-SSRC 360
AH+G+ + ++ F+ + +YL ++G D +++W + RC
Sbjct: 249 AHEGA-ILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC 286
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN-RC 228
H+ + ++KFSP+G+Y AS DG +++W V + RC
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC 286
Score = 35.9 bits (79), Expect = 0.017
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKL 204
+ +++++ +RL+ + C + H V S++F+P + +F SGS DG V++
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDC----LGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRI 423
Query: 205 WDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
W + + +A+A V++V + + + ++ L S + + + S CL
Sbjct: 424 WSASQCQVVD-WADAR--GIVTAVCYQPDGQAVIIGTLTSDCRFYNV-SGHCL 472
Score = 29.1 bits (62), Expect = 2.0
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCP--VPSHHHKRQVNS--IKF---SPNGK 165
V + P G +I T R Y+V+ C + H+ K+ N I F S +
Sbjct: 444 VCYQPDGQAVIIGTLTSDCRFYNVS-GHCLQLDGHICLHNKKKSSNKRIIGFQFDSTDPS 502
Query: 166 YFASGSADGSVKLWDTVSNR-CFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
SAD V++ +S R + + + + S +FT + K+++++ DSS+ +W
Sbjct: 503 RVMVASADSQVRI---ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVW 558
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 247 AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELA-SSRC 360
AH+G+ + ++ F+ + +YL ++G D +++W + RC
Sbjct: 249 AHEGA-ILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC 286
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 38.7 bits (86), Expect = 0.002
Identities = 31/107 (28%), Positives = 46/107 (42%)
Frame = +1
Query: 16 HPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGS 195
H + +S+S P I ++D ++ P HH+ V S+ S + ASGS D
Sbjct: 27 HKAEHFVTSSSSDPSISVHDGLSTSTLP-PTILRHHQDGVTSLALSNDSTLLASGSIDHC 85
Query: 196 VKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKL 336
VKL+ S F T + +AF + L +G D IKL
Sbjct: 86 VKLYKFPSGE-FQTNITRFT-LPIRVLAFNGSGSLLAAAGDDEGIKL 130
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSE-VSSVAFTRNSKYLLT 309
VN ++SP+G+ A V ++D + FA D E + + + N KY+ T
Sbjct: 198 VNIPRWSPDGRTLAVPGLRNDVVMYDRFTGE--KLFALRGDHLEAICYLTWAPNGKYIAT 255
Query: 310 SGLDSSIKLWEL 345
SGLD + LW++
Sbjct: 256 SGLDKQVLLWDV 267
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
H + + ++PNGKY A+ D V LWD
Sbjct: 237 HLEAICYLTWAPNGKYIATSGLDKQVLLWD 266
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
HK V + F PNG+ AS G+V W+
Sbjct: 145 HKGPVTGLDFHPNGELLASIDTTGTVLCWE 174
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSP-NGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H+R+VN + F+P N A+ S+D +V L+D ++H+G EV V + N +
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEG-EVFQVEWDPNHE 317
Query: 298 YLL-TSGLDSSIKLWEL 345
+L +SG D + +W+L
Sbjct: 318 TVLASSGEDRRLMVWDL 334
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGK-YFASGSADGSVKLWD---TVSNRCFNT-FANAHDGSEVSSVAF- 282
H ++ + +SP + Y SGS D + LWD T ++ N F S ++ V++
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 283 TRNSKYLLTSGLDSSIKLWELASSR 357
+N ++G D + +W+ +++
Sbjct: 227 MKNENLFGSAGEDGRLVIWDTRTNQ 251
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/77 (24%), Positives = 44/77 (57%)
Frame = +1
Query: 115 HHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
H + +NSI FS +G + A+ DG ++++D ++ + ++ G+ + +++ +
Sbjct: 300 HICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLV-CGGKSYYGA-LLCCSWSMDG 357
Query: 295 KYLLTSGLDSSIKLWEL 345
KY+LT G D +++W +
Sbjct: 358 KYILTGGEDDLVQVWSM 374
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWD 210
+++S+ +RL+ V +S C + HK V + F+P + YF SGS DG V++WD
Sbjct: 377 LLSSSVDETVRLWRVGSSD--EC-IRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
Score = 34.3 bits (75), Expect = 0.052
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 199 KLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWEL 345
K + +S+ C +AHDGS V + F+ + KYL ++G D +++W +
Sbjct: 239 KQFKELSSLCVGQEFSAHDGSIVV-MKFSHDGKYLASAGEDCVVRVWNI 286
Score = 34.3 bits (75), Expect = 0.052
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN-RCFNTFANAHDGSEVSSVAFTRNSK 297
H + +KFS +GKY AS D V++W+ + + R N F A S+ S V F N K
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEFEVAE--SDSSCVYFGMNDK 313
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 4 CVAFHPLGD-HIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASG 180
CVAF+P+ D + I+ + +R++DV SQ V V ++ V ++ + P+GK G
Sbjct: 409 CVAFNPVDDNYFISGSIDGKVRIWDV--SQFRV--VDYTDIRQIVTALCYRPDGKGAVVG 464
Query: 181 SADGSVKLWDTVSNR 225
S G + + T N+
Sbjct: 465 SMTGECRFYHTTDNQ 479
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFS-PNGKY-FASG 180
V + P G + + S ++ +Y + + H VN + FS PN + +
Sbjct: 425 VVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTC 484
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTR-NSKYLLTSGLDSSIKLWELASSR 357
D ++K+WD V+ +TF H+ S + N +++ ++ +D IK W +
Sbjct: 485 GEDKTIKVWDAVTGNKLHTF-EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDNMG 543
Query: 358 CLIQYTGAG 384
+ Y G
Sbjct: 544 SRVDYDAPG 552
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFS-PNGKY-FASG 180
V + P G + + S ++ +Y + + H VN + FS PN + +
Sbjct: 425 VVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTC 484
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTR-NSKYLLTSGLDSSIKLWELASSR 357
D ++K+WD V+ +TF H+ S + N +++ ++ +D IK W +
Sbjct: 485 GEDKTIKVWDAVTGNKLHTF-EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDNMG 543
Query: 358 CLIQYTGAG 384
+ Y G
Sbjct: 544 SRVDYDAPG 552
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/124 (23%), Positives = 57/124 (45%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P ++++ ++ +RLYDV +S + + + + F F SGS DG
Sbjct: 21 FSPQSNNLLVASWDSYLRLYDVESSSLSL----ELNSQAALLDCCFENESTSFTSGS-DG 75
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
++ +D ++ +T D S +S+ ++ ++++G D IK W+ L+
Sbjct: 76 FIRRYD-LNAGTVDTIGRHDDIS--TSIVYSYEKGEVISTGFDEKIKFWDTRQRESLVFS 132
Query: 373 TGAG 384
T AG
Sbjct: 133 TDAG 136
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/124 (23%), Positives = 57/124 (45%)
Frame = +1
Query: 13 FHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG 192
F P ++++ ++ +RLYDV +S + + + + F F SGS DG
Sbjct: 21 FSPQSNNLLVASWDSYLRLYDVESSSLSL----ELNSQAALLDCCFENESTSFTSGS-DG 75
Query: 193 SVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
++ +D ++ +T D S +S+ ++ ++++G D IK W+ L+
Sbjct: 76 FIRRYD-LNAGTVDTIGRHDDIS--TSIVYSYEKGEVISTGFDEKIKFWDTRQRESLVFS 132
Query: 373 TGAG 384
T AG
Sbjct: 133 TDAG 136
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 70 YDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANA 249
Y+ T+ CF H V ++ N Y SGS D ++K+W + +C T +
Sbjct: 257 YNAATN-CFEPSASLTGHTLAVVTLYVGANRLY--SGSMDKTIKVWSLDNLQCIQTLTD- 312
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
H +S + + ++LL+ LD+++K+W
Sbjct: 313 HSSVVMSLICW---DQFLLSCSLDNTVKIW 339
Score = 34.3 bits (75), Expect = 0.052
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 175 SGSADGSVKLWD-TVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
+G+ DGS+ W + CF A+ G ++ V + L + +D +IK+W L +
Sbjct: 245 AGTQDGSILAWRYNAATNCFEPSASL-TGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDN 303
Query: 352 SRCL 363
+C+
Sbjct: 304 LQCI 307
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 37.5 bits (83), Expect = 0.006
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASG 180
VA+H ++I S + ++D+ T+Q H+R++N + F+P N A+
Sbjct: 224 VAWHMKNENIFGSAGDDCQLVIWDLRTNQM---QHQVKVHEREINYLSFNPFNEWVLATA 280
Query: 181 SADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL-TSGLDSSIKLWEL 345
S+D +V L+D + H+G EV V + N + +L +SG D + +W++
Sbjct: 281 SSDSTVALFDLRKLTAPLHVLSKHEG-EVFQVEWDPNHETVLASSGEDRRLMVWDI 335
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +1
Query: 166 YFASGSADGSVKLWD---TVSNRCFNTFANAHDG--SEVSSVAF-TRNSKYLLTSGLDSS 327
Y SGS D + LWD T +++ N + ++G S + VA+ +N ++G D
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPM-HVYEGHQSIIEDVAWHMKNENIFGSAGDDCQ 242
Query: 328 IKLWELASSR 357
+ +W+L +++
Sbjct: 243 LVIWDLRTNQ 252
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 37.5 bits (83), Expect = 0.006
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Frame = +1
Query: 7 VAFHPLGDH-IIASTSHPVIRLYDVTTSQCFVCPV-PS---HHHKRQVNSIKFSPNG-KY 168
+A+ P +H + S ++ +DV + PS + H S+ ++ +
Sbjct: 325 LAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNL 384
Query: 169 FASGSADGSVKLWDTVSNR--CFNTFANAHDGSEVSSVAFTRNSKYLLT-SGLDSSIKLW 339
A+GS D +VKLWD +N C T N + G + +AF+ ++ +LL G+ +KLW
Sbjct: 385 LATGSKDRTVKLWDLSNNEPSCIATH-NPNAGG-LFFIAFSPDNPFLLAMGGVMGELKLW 442
Query: 340 ELAS 351
+ S
Sbjct: 443 DTLS 446
Score = 35.5 bits (78), Expect = 0.023
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGK-YFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H R V + ++ + AS SAD VK+WD + C T H EV +VA+ +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITM--EHHTKEVQAVAWNHYAP 289
Query: 298 YLLTSG-LDSSIKL 336
+L SG D ++ L
Sbjct: 290 EVLLSGSFDQTVVL 303
Score = 30.7 bits (66), Expect = 0.64
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Frame = +1
Query: 133 VNSIKFSPNGKY-FASGSADGSVKLWD--------TVSNRCFNTFANAHDGSEVSSVAFT 285
V S+ + P+ ++ F DG+VK +D + SN F N HD + +SV++
Sbjct: 322 VESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTI--NGHDEA-ATSVSYN 378
Query: 286 RNSKYLLTSGL-DSSIKLWELASS 354
++ LL +G D ++KLW+L+++
Sbjct: 379 ISAPNLLATGSKDRTVKLWDLSNN 402
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHP-VIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYF-ASG 180
V+++ +++A+ S ++L+D++ ++ C + + + I FSP+ + A G
Sbjct: 375 VSYNISAPNLLATGSKDRTVKLWDLSNNEPS-CIATHNPNAGGLFFIAFSPDNPFLLAMG 433
Query: 181 SADGSVKLWDTVSN 222
G +KLWDT+S+
Sbjct: 434 GVMGELKLWDTLSD 447
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKY-FASGSADGSVKLW 207
+I ++ +RL++V T C + + H+ +V S+ F P+ Y FAS D ++K+W
Sbjct: 144 VITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIW 202
Score = 35.1 bits (77), Expect = 0.030
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 157 NGK-YFASGSADGSVKLWDTVSNRCFNTFANAHDG-SEVSSVAFTRNSKYLLTSGLDSSI 330
NG Y A+G G +++ D S + D +E+ + + ++T+ D S+
Sbjct: 96 NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPL--KPQLVITASKDESV 153
Query: 331 KLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTW 483
+LW + + C++ + GAG G + + F+ ++ Y T++ W
Sbjct: 154 RLWNVETGICILIFAGAG--GHRYEVLSVDFHPSDIYRFASCGMDTTIKIW 202
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 19 PLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSV 198
PL I++ IR++D T + HK + S+ + + +F +GS D +
Sbjct: 185 PLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTA 244
Query: 199 KLWD 210
KLWD
Sbjct: 245 KLWD 248
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN 222
H +N++ FSP+GK F+SG DG V+L SN
Sbjct: 316 HFGPINALAFSPDGKSFSSGGEDGYVRLHHFDSN 349
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 5/161 (3%)
Frame = +1
Query: 61 IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW--DTVSNRCFN 234
I+++ + S+C +P+H VNS+ + F SGSADG+VK W D +
Sbjct: 230 IKVWRIADSKCLES-IPAHDDA--VNSVVSTTEAIVF-SGSADGTVKAWKRDQQGKYTKH 285
Query: 235 TFAN--AHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHL 408
T S V+++A ++N + D + WE + Y G + H
Sbjct: 286 TLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQ---LNYGGI----LKGHK 338
Query: 409 AQAIFNHTEDYVLFPDEATTSLCTW-HSRSASRCPLISLGH 528
+ ++F A ++C W + C + GH
Sbjct: 339 LAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Score = 34.7 bits (76), Expect = 0.039
Identities = 23/100 (23%), Positives = 44/100 (44%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V+ + + S S D ++K+W ++C + AHD + V+SV T +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIP-AHDDA-VNSVVSTTEA-I 261
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAI 420
+ + D ++K W+ ++T T KQ+ A+
Sbjct: 262 VFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTAL 301
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRC 228
HK +V S+ SP F SGS D SV+LWD N C
Sbjct: 113 HKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
Score = 35.5 bits (78), Expect = 0.023
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFS--PNGKYFAS- 177
V FH D ++ S+ +RL+D+ ++ ++H K + + F+ P+ +S
Sbjct: 30 VGFHRTDDLLVTSSEDDSLRLFDIANAKQLKI---TYHKKHGTDRVCFTHHPSSLICSSR 86
Query: 178 ---GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELA 348
S S++ NR F D V S+ + + ++ LD S++LW+L
Sbjct: 87 YNLESTGESLRYLSMYDNRILRYFKGHKD--RVVSLCMSPINDSFMSGSLDRSVRLWDLR 144
Query: 349 SSRC 360
+ C
Sbjct: 145 VNAC 148
Score = 31.9 bits (69), Expect = 0.28
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWD 210
F+P+GKY SGS DG++ W+
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWN 272
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLT 309
+VN IKFS +GK + + ++ + D F+ FT + KY+L+
Sbjct: 202 EVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLS 261
Query: 310 SGLDSSIKLWEL 345
D ++ W +
Sbjct: 262 GSGDGTLHAWNI 273
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 151 SPNGKYFASGSADGSVKLWDTVSNR------CFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
SPNG++ A+ + VK+W+ V + S V+ + F+ NS+ ++T+
Sbjct: 248 SPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITA 307
Query: 313 GLDSSIKLWEL 345
D SI++W +
Sbjct: 308 SKDGSIRVWNI 318
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
HK V + FSPN + + S DGS+++W+
Sbjct: 288 HKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
Score = 31.5 bits (68), Expect = 0.37
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCF--------VCPVP---SHHHKRQVNSIKFS 153
+ F P + II ++ IR++++ V P+P S + + +
Sbjct: 295 LCFSPNSEQIITASKDGSIRVWNINVRYHLDEDPKTLKVFPIPLCDSGGNPLHYDRLSLC 354
Query: 154 PNGKYFASGSADGSVKLWDTV-SNRCFNTFANAHDGSEVSSVAFT--------RNSKYLL 306
P GK A+ + GS W + +T AH+G +++ +++ R++ L
Sbjct: 355 PEGKILAA--SHGSTLQWLCAETGNVLDTAEKAHEG-DITCISWAPKAITVGERHAMVLG 411
Query: 307 TSGLDSSIKLWELASSRCL 363
TSG D +KLWE S+ L
Sbjct: 412 TSGDDKKVKLWEAPKSQSL 430
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW--DTVSNRCFNTF-ANAHDGSEVSSVAFTRN 291
H V + FS +GK A+ ADG ++++ D S++ F N G ++VAF +
Sbjct: 85 HGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLRINLPAGGHPTAVAFADD 144
Query: 292 SKYLLTS 312
+ ++ +
Sbjct: 145 ASSIVVA 151
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 241 ANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR-CLIQY-TGAGTTGK 396
A AH G+ V+ + T + YLL++G DS I+LW++ S R L+ + TG T K
Sbjct: 308 ATAHYGA-VTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNK 360
Score = 33.9 bits (74), Expect = 0.069
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Frame = +1
Query: 121 HKRQVNSIKFS-PNGKYFASGSADGSVKLWDT------------VSNRCFNT----FANA 249
H+ VNS++ G+Y SG+ADGS ++D ++C T N
Sbjct: 42 HRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENG 101
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAG 384
H + S++ + ++ +T D +K+W+ +++ ++ + G
Sbjct: 102 HKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPG 146
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDG 258
H V +K + +G Y S +D ++LWD S R NT N G
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR--NTLVNFETG 354
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFA-SGSADGSVKLWD 210
I A T +RL D+ S F + H + V S+++S + ++ +G DG+++ WD
Sbjct: 163 IAAGTEDVQVRLCDIA-SGAFSHTLSGH--RDGVMSVEWSTSSEWVLYTGGCDGAIRFWD 219
Query: 211 TVSNRCF 231
CF
Sbjct: 220 IRRAGCF 226
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 157 NGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL-TSGLDSSIK 333
+G FAS S D ++++WD V AHD E+ S + + +L TS +D ++K
Sbjct: 161 HGDVFASASGDCTLRIWD-VREPGSTMIIPAHD-FEILSCDWNKYDDCILATSSVDKTVK 218
Query: 334 LWELASSR 357
+W++ S R
Sbjct: 219 VWDVRSYR 226
Score = 36.3 bits (80), Expect = 0.013
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVK 201
GD +++ +R++DV + +P+H ++ S ++ + A+ S D +VK
Sbjct: 162 GDVFASASGDCTLRIWDVREPGSTMI-IPAHDF--EILSCDWNKYDDCILATSSVDKTVK 218
Query: 202 LWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS-GLDSSIKLWELASSRCLI 366
+WD S R N H G V V F+ + + L+ S D S+ LW+ L+
Sbjct: 219 VWDVRSYRVPLAVLNGH-GYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALV 273
Score = 32.7 bits (71), Expect = 0.16
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGS-EVSSVAF--TRNSKYLLTSGLDSSIKLWEL 345
DGSVK++DT N + + + EV SV + TR +L TS D ++KLW +
Sbjct: 82 DGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFL-TSSWDDTVKLWAM 136
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 36.7 bits (81), Expect = 0.010
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFAS 177
+ AF G + ++ +++ D T +C H+R ++F P + + AS
Sbjct: 107 IAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTG---HRRTPWVVRFHPRHSEIVAS 163
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHD-GSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
GS D V+LW+ + C T HD ++S+AF + LL + +W
Sbjct: 164 GSLDHEVRLWNAKTGECIRT----HDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 36.7 bits (81), Expect = 0.010
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFAS 177
+ AF G + ++ +++ D T +C H+R ++F P + + AS
Sbjct: 107 IAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTG---HRRTPWVVRFHPRHSEIVAS 163
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHD-GSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
GS D V+LW+ + C T HD ++S+AF + LL + +W
Sbjct: 164 GSLDHEVRLWNAKTGECIRT----HDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 36.3 bits (80), Expect = 0.013
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYF-ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK 297
H + V +I +S + + AS DG+V +W+ SN A H + V V +++
Sbjct: 159 HTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGL 218
Query: 298 YLLTSGLDSSIKLWEL 345
LL+ G D + +L+++
Sbjct: 219 SLLSCGYDCTSRLFDV 234
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWD 210
FSP+G+ ASGS+DGSV ++D
Sbjct: 394 FSPDGETLASGSSDGSVYMYD 414
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 36.3 bits (80), Expect = 0.013
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 TTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWDTVSNRCFNTFANAHD 255
TT +C S HKR++ S+ P N + FA+ S DG V LW R + + D
Sbjct: 181 TTIKCHTSNQISSQHKRKLRSLILCPVNEQLFATSSLDGMVSLWQLQPGRLVASLLSTTD 240
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 36.3 bits (80), Expect = 0.013
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 7/172 (4%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW-- 207
+ +S+ I+++ + S+C H H +NS+ + F +GSADG+VK+W
Sbjct: 250 LYSSSWDTTIKVWRIADSKCLES---IHAHDDAINSVMSGFDDLVF-TGSADGTVKVWKR 305
Query: 208 DTVSNRCFNTFANA--HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGA 381
+ +T A + V+++A S + D + WE R +TG
Sbjct: 306 ELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE----RSKRSFTGG 361
Query: 382 GTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTWH---SRSASRCPLISLGH 528
G H + + +L A ++C W S + +C + GH
Sbjct: 362 ILKG---HKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGH 410
Score = 35.9 bits (79), Expect = 0.017
Identities = 28/136 (20%), Positives = 58/136 (42%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V+S+ S S D ++K+W ++C + +AHD + ++SV +
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESI-HAHDDA-INSV-MSGFDDL 290
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCT 480
+ T D ++K+W+ ++T A KQ++ A+ ++ +++ + +
Sbjct: 291 VFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNY 350
Query: 481 WHSRSASRCPLISLGH 528
W S I GH
Sbjct: 351 WERSKRSFTGGILKGH 366
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 232 NTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
N+ H+ + VSS++ L +S D++IK+W +A S+CL
Sbjct: 228 NSVKTKHNDA-VSSLSLDVELGLLYSSSWDTTIKVWRIADSKCL 270
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 36.3 bits (80), Expect = 0.013
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G ++ ST + I L+D T S + ++ + V+S+ SP G +F SGS+ G + L
Sbjct: 1201 GPMVMYSTQNCGIHLWD-TRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 205 WD 210
WD
Sbjct: 1260 WD 1261
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.9 bits (79), Expect = 0.017
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Frame = +1
Query: 115 HHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTV----------SNRCFNTFANAHDGSE 264
H H R V + FS + SGS DGS+++W + N + N H S
Sbjct: 117 HGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSV 176
Query: 265 VSSVA-FTRNSKYLLTSGLDSSIKLWELASSRCL 363
V + + +++S D + K+W L+ + L
Sbjct: 177 TDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLL 210
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/99 (22%), Positives = 40/99 (40%)
Frame = +1
Query: 82 TSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS 261
T Q P S H KF + + A ++ GS+ W + ++
Sbjct: 24 TEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTS-GSIFYWSWTKPQAE---VKSYPVE 79
Query: 262 EVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTG 378
+ ++A YL+ G+ I LWE+A+ + L ++ G
Sbjct: 80 PIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHG 118
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 127 RQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANA 249
+ + + + +G SGS DG V +WD S R T +A
Sbjct: 264 KAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHA 304
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 35.5 bits (78), Expect = 0.023
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 LCVAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPN-GKYFAS 177
+ AF G + ++ +++ D T C H+R ++F P+ + AS
Sbjct: 110 IAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTG---HRRTPWVVRFHPHHSEIVAS 166
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLW 339
GS D V+LW+T ++ C + ++S+AF + LL + +W
Sbjct: 167 GSLDLEVRLWNTTTSECIRSHLFYR---PIASIAFHAEGE-LLAVASGHKLHMW 216
Score = 35.1 bits (77), Expect = 0.030
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 127 RQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL 306
R + FS +G+ AS D +VK+ D + C V V F + ++
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHSEIV 164
Query: 307 TSG-LDSSIKLWELASSRCL 363
SG LD ++LW +S C+
Sbjct: 165 ASGSLDLEVRLWNTTTSECI 184
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 35.5 bits (78), Expect = 0.023
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
VNSI F P FA+G DG V +WD N + + + +S+++F+R+ + L
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWD--GNNKKRLYQYSKYPTSISALSFSRDGQLL 298
Score = 28.3 bits (60), Expect = 3.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKL--WDTVSNRCFNTFA-NAHDGSE--------VS 270
K Q ++ PNG +A S +G V + +D +A H SE V+
Sbjct: 186 KYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAGRDIVYPVN 245
Query: 271 SVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYT 375
S+AF T G D + +W+ + + L QY+
Sbjct: 246 SIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYS 280
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 35.5 bits (78), Expect = 0.023
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN-RCFNTFANAHDGSEVSSVAFT---R 288
HKR + + ++P G FA+ S D +VK+W ++ R GS V++VA+T R
Sbjct: 695 HKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVTAVAWTGLDR 754
Query: 289 NSKY-LLTSGLDSSIKLWELASSRCLIQYTGAGTT 390
N K + G++S L EL++ + I T GTT
Sbjct: 755 NEKSGCVAVGMESG--LIELSNVK--IIETEEGTT 785
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
SG + GSV+ WD+ +N H G +V+++A + + + ++G D + L++L+
Sbjct: 264 SGDSTGSVQFWDSQHGTLLQAHSN-HKG-DVNALAASPSHNRVFSAGADGQVILYKLSGG 321
Query: 355 RCLIQYTGAGTTGKQDHLAQAIFNHTED 438
Q + K D++ + HT D
Sbjct: 322 TSRSQDFKPSSAQKWDYIG-CVRAHTHD 348
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +1
Query: 22 LGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVK 201
L H+ A+ +R+Y ++ S + S+ +S + + SGS+DG ++
Sbjct: 164 LDRHLAAACDDGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIR 223
Query: 202 LWDTVSNRCFNTF 240
WD +N C +
Sbjct: 224 CWD--ANLCHEVY 234
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Frame = +1
Query: 121 HKRQVNSIKFS-PNGKYFASGSADGSVKLWDT------------VSNRCFNTFANAHDGS 261
H+ VNS++ G+Y SG+ADGS ++D ++C T H+
Sbjct: 42 HRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENG 101
Query: 262 E----VSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAG 384
S++ + ++ +T D +K+W+ +S+ ++ + G
Sbjct: 102 HKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPG 146
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFA-SGSADGSVKLWD 210
I A T +RL D+ S F + H + V S+++S + ++ +G DG+++ WD
Sbjct: 163 IAAGTDDVQVRLCDIA-SGAFSHTLSGH--RDGVMSVEWSTSSEWVLYTGGCDGAIRFWD 219
Query: 211 TVSNRCFNTFANA 249
CF N+
Sbjct: 220 IRRAGCFRVLDNS 232
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 241 ANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
A AH G V+ + T + YLL++G S I+LW++ S R
Sbjct: 308 ATAHYGV-VTGLKATNDGMYLLSAGSYSRIRLWDIESGR 345
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDG 258
H V +K + +G Y S + ++LWD S R NT N G
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGR--NTLVNFETG 354
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.1 bits (77), Expect = 0.030
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGS--EVSSVAFTRNS 294
HK VN++ F+ +G SGS D V LWD + +F + H + + + F+ +
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFS-DD 112
Query: 295 KYLLTSGLDSSIKLWELASS 354
+ ++TS D ++ ++ S
Sbjct: 113 RTIVTSAADKQVRYSKILES 132
Score = 32.3 bits (70), Expect = 0.21
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 115 HHHKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
H ++ V + F P +Y SGS G + +W A D V+ + +
Sbjct: 306 HTNRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLR--AMEADRHVVNCIESHPH 363
Query: 292 SKYLLTSGLDSSIKLW 339
+ +SG+D+ IK+W
Sbjct: 364 MPLMCSSGIDTDIKIW 379
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 34.7 bits (76), Expect = 0.039
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 130 QVNSIKFSPNGKYFASGSAD-GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL 306
Q++++ +SP G+Y AS S D S +WD VS G +S + ++ Y
Sbjct: 214 QISALSWSPCGRYLASASYDSSSFTIWD-VSQGAGTPIRRGLGG--ISMLKWSPTGDYFF 270
Query: 307 TSGLDSSIKLWE 342
+ D + LWE
Sbjct: 271 AARFDGTFCLWE 282
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDT 213
++ +K+SP G YF + DG+ LW+T
Sbjct: 257 ISMLKWSPTGDYFFAARFDGTFCLWET 283
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 34.7 bits (76), Expect = 0.039
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H V + +SP+ ASGS D +V +W+ + C T H S V V + +
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC-TTVLRGH-LSLVKGVTWDPIGSF 174
Query: 301 LLTSGLDSSIKLW 339
+ + D ++ +W
Sbjct: 175 IASQSDDKTVIIW 187
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 34.7 bits (76), Expect = 0.039
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLW 207
+ +S V++++DV +Q H+++V SI +S + ASGS DGSVKLW
Sbjct: 549 VASSNFEGVVQVWDVARNQLVT---EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 604
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 34.7 bits (76), Expect = 0.039
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 34 IIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLW 207
+ +S V++++DV +Q H+++V SI +S + ASGS DGSVKLW
Sbjct: 549 VASSNFEGVVQVWDVARNQLVT---EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 604
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVS 270
FSP Y A + DG +K+WDTV + FA+ E +
Sbjct: 13 FSPALDYLALSTGDGRIKIWDTVKGQVQTEFADIASTEETN 53
Score = 30.3 bits (65), Expect = 0.85
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 127 RQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLL 306
+ V+S+ SP+GK + S +K ++ + F H G V VAFT + KY+L
Sbjct: 159 KTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTG-HPGV-VRCVAFTEDGKYVL 214
Query: 307 TSGL-DSSIKLWE 342
+S + + I +W+
Sbjct: 215 SSAVGERYIAVWK 227
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 33.9 bits (74), Expect = 0.069
Identities = 28/117 (23%), Positives = 53/117 (45%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G +I TSH ++++D T QC H Q + + N + +SGS D ++
Sbjct: 227 GSYISIGTSHGQVQVWDGT--QCKRVRTMGGH---QTRTGVLAWNSRILSSGSRDRNILQ 281
Query: 205 WDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYT 375
D F + H SEV + ++ + + L + G D+ + +W S + +++ T
Sbjct: 282 HDIRVQSDFVSKLVGHK-SEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLT 337
Score = 31.5 bits (68), Expect = 0.37
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +1
Query: 70 YDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANA 249
+D+ FV + H K +V +K+S + + ASG D + +W+ S +
Sbjct: 282 HDIRVQSDFVSKLVGH--KSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTE- 338
Query: 250 HDGSEVSSVAFTRNSKYLLTSG---LDSSIKLWELASSRCL 363
H + V ++ ++ + LL SG D I+ W + L
Sbjct: 339 HTAA-VKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQL 378
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
V S++++ G Y + G++ G V++WD + T G + + NS+ L +
Sbjct: 218 VCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMG----GHQTRTGVLAWNSRILSSG 273
Query: 313 GLDSSI 330
D +I
Sbjct: 274 SRDRNI 279
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 33.9 bits (74), Expect = 0.069
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHD 255
H V I P F +GS DG VKLWD + + + + H+
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIHHWPKLHE 2418
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDT 213
+++++F P G FAS + DG+V W +
Sbjct: 2209 ISAVQFGPFGHRFASAALDGTVCTWQS 2235
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKL-WDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLT 309
++ +F GK + DG D N AH GS V+ +A + LT
Sbjct: 2334 LHDFRFIATGKMKKQRNPDGGSSTDGDQNKNGMLWYIPKAHLGS-VTKIATIPRTSLFLT 2392
Query: 310 SGLDSSIKLWELASSRCL 363
D +KLW+ +++ +
Sbjct: 2393 GSKDGEVKLWDAKAAKLI 2410
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 33.9 bits (74), Expect = 0.069
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 28 DHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFS-PNGKYFASGSADGSVKL 204
+HI +S ++ ++DVTT Q + H+++ S+ FS SGS D VK+
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSL---MEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKV 490
Query: 205 WDTVSNRCFNTFANAHDGSEVSSVAFT-RNSKYLLTSGLDSSIKLWEL 345
W T R + N + + V + +S Y+ D I ++L
Sbjct: 491 WCT---RQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDL 535
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 250 HDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELAS 351
H + VSS+ F R+ + T+G+ IK+++ +S
Sbjct: 369 HSANIVSSIEFDRDDELFATAGVSRCIKVFDFSS 402
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 33.9 bits (74), Expect = 0.069
Identities = 17/72 (23%), Positives = 40/72 (55%)
Frame = +1
Query: 139 SIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGL 318
++ F+P G A+G+ DG+++++ S + AH S V + F+ + ++L++ G
Sbjct: 158 ALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAH--SSVKCLTFSESGQFLVSLG- 214
Query: 319 DSSIKLWELASS 354
++W++ +S
Sbjct: 215 GPVCRVWDVNAS 226
Score = 33.9 bits (74), Expect = 0.069
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
K +++ S +GK A G+ +G V + ++ + AH G V+++ F+ +S+ L
Sbjct: 285 KNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGL-VTALTFSPDSRGL 343
Query: 304 LTSGLDSSIKL 336
++ DS +L
Sbjct: 344 VSVSFDSRARL 354
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 33.5 bits (73), Expect = 0.091
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +1
Query: 121 HKRQVNSIKFSP-NGKYFASGSADGSVKLWDTVSNRCFNTF-----ANAHDGSEVSSVAF 282
HK V ++F+ + ASG+ DG + +WD + + F + + E+S +++
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW 180
Query: 283 TRNSKYLLTS-GLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFN-HTEDYVLFPD 456
R + +L S + + +W+L + +I + A + ++ + Q N T+ V D
Sbjct: 181 NRKVQQILASTSYNGTTVIWDLRKQKPIINF--ADSVRRRCSVLQWNPNVTTQIMVASDD 238
Query: 457 EATTSLCTWHSRS 495
+++ +L W R+
Sbjct: 239 DSSPTLKLWDMRN 251
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 33.5 bits (73), Expect = 0.091
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +1
Query: 121 HKRQVNSIKFSP-NGKYFASGSADGSVKLWDTVSNRCFNTF-----ANAHDGSEVSSVAF 282
HK V ++F+ + ASG+ DG + +WD + + F + + E+S +++
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW 180
Query: 283 TRNSKYLLTS-GLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFN-HTEDYVLFPD 456
R + +L S + + +W+L + +I + A + ++ + Q N T+ V D
Sbjct: 181 NRKVQQILASTSYNGTTVIWDLRKQKPIINF--ADSVRRRCSVLQWNPNVTTQIMVASDD 238
Query: 457 EATTSLCTWHSRS 495
+++ +L W R+
Sbjct: 239 DSSPTLKLWDMRN 251
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 33.5 bits (73), Expect = 0.091
Identities = 25/100 (25%), Positives = 45/100 (45%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H ++ + S + + SGS D + K+W RC + NAH+ + V++V +
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVES-VNAHEDA-VNAVV-SGFDGL 266
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAI 420
+ T D ++K+W ++ + T KQD AI
Sbjct: 267 VFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAI 306
Score = 31.9 bits (69), Expect = 0.28
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1
Query: 100 CPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLW----DTVSNRCFNTFANAHDGSEV 267
C + H+ VN++ +G F +GSADG+VK+W + F + V
Sbjct: 245 CVESVNAHEDAVNAVVSGFDGLVF-TGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAV 303
Query: 268 SSVAFTRNSKYLLTSGLDSSIKLWE 342
+++A +++ + D ++ WE
Sbjct: 304 TAIAVDQSATLVYCGSSDGTVNFWE 328
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +1
Query: 139 SIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGL 318
S+ +SP+ K SGS+DG ++ WD S C + R + L G
Sbjct: 203 SVTWSPDAKRIFSGSSDGLIRCWDATS--CHEVY---------------RITAGLGGLGS 245
Query: 319 DSSIKLWELASSRCLIQYTGAGT 387
S I +W L S RC + +G T
Sbjct: 246 SSEICVWSLLSLRCSVLVSGDST 268
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/62 (17%), Positives = 30/62 (48%)
Frame = +1
Query: 163 KYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
KY G D +++ ++ +T N H+G+++ + + + ++T D + +W
Sbjct: 3243 KYIRWGFPDRTLRFMSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWR 3302
Query: 343 LA 348
++
Sbjct: 3303 VS 3304
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.1 bits (72), Expect = 0.12
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 121 HKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVS-SVAFTRNS 294
HKR + ++F + +Y A+G D S+K WD + + T +A G + S + F +
Sbjct: 596 HKRSLGVVQFDTTKNRYLAAGD-DFSIKFWDMDTIQLL-TAIDADGGLQASPRIRFNKEG 653
Query: 295 KYLLTSGLDSSIKL 336
L S D+ IK+
Sbjct: 654 SLLAVSANDNMIKV 667
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 127 RQVNSIKFSPNG-KYFASG-SADGS--VKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
R ++ +S +G + F+ G S DG + W+ T+ H S + V F
Sbjct: 551 RWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRS-LGVVQFDTTK 609
Query: 295 KYLLTSGLDSSIKLWELASSRCL 363
L +G D SIK W++ + + L
Sbjct: 610 NRYLAAGDDFSIKFWDMDTIQLL 632
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.1 bits (72), Expect = 0.12
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 121 HKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVS-SVAFTRNS 294
HKR + ++F + +Y A+G D S+K WD + + T +A G + S + F +
Sbjct: 596 HKRSLGVVQFDTTKNRYLAAGD-DFSIKFWDMDTIQLL-TAIDADGGLQASPRIRFNKEG 653
Query: 295 KYLLTSGLDSSIKL 336
L S D+ IK+
Sbjct: 654 SLLAVSANDNMIKV 667
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 127 RQVNSIKFSPNG-KYFASG-SADGS--VKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
R ++ +S +G + F+ G S DG + W+ T+ H S + V F
Sbjct: 551 RWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRS-LGVVQFDTTK 609
Query: 295 KYLLTSGLDSSIKLWELASSRCL 363
L +G D SIK W++ + + L
Sbjct: 610 NRYLAAGDDFSIKFWDMDTIQLL 632
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
VN+I F P FASG DG V +WD N + + + +++++F+R+ L
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWD--GNNKKRLYQYSKYPTSIAALSFSRDGGLL 297
Score = 29.1 bits (62), Expect = 2.0
Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Frame = +1
Query: 22 LGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADG--S 195
+G+ ++ +T+ + +YD+ S K Q ++ PNG +A S +G S
Sbjct: 152 VGNRLVVATAGRHVNIYDLRNMSQPEQRRESSL-KYQTRCVRCYPNGTGYALSSVEGRVS 210
Query: 196 VKLWDT-----VSNRCFNTFANAHDGSE----VSSVAFTRNSKYLLTSGLDSSIKLWELA 348
++ +D F + DG + V+++AF + G D + +W+
Sbjct: 211 MEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGN 270
Query: 349 SSRCLIQYT 375
+ + L QY+
Sbjct: 271 NKKRLYQYS 279
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.7 bits (71), Expect = 0.16
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPV-IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGS 183
V FH D I SH + +YD + +C VP + S +S N + +
Sbjct: 969 VQFH--NDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYASF 1026
Query: 184 ADGSVKLWDTVSNR 225
ADG++ ++D S R
Sbjct: 1027 ADGNIAVFDAESLR 1040
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR 225
HH + +N+ F P + A+G G V +W NR
Sbjct: 210 HHTKVINAFAFHPTERVIAAGDVTGRVLIWRGFGNR 245
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 115 HHHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
H H +VN + FS +G Y SG +G + +W
Sbjct: 280 HWHSAEVNVLNFSSDGAYLYSGGREGVLVVW 310
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 32.7 bits (71), Expect = 0.16
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Frame = +1
Query: 55 PVIRLYDVTTSQ----CFVCP-VPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD-TV 216
P +RL V TSQ C V +H H +NSI S +G+ F S D V LW+ +
Sbjct: 194 PSLRLPVVVTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISAD-DLRVNLWNLEI 252
Query: 217 SNRCFNTF----ANAHDGSEV-SSVAF-TRNSKYLLTSGLDSSIKLWELASSRCLIQYT 375
SN+ FN N D +EV +S F + L S SI+L ++ S +T
Sbjct: 253 SNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKGSIRLIDMRQSALCDSHT 311
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
+++ S +GK A G+ +G V + D+ + AH G V+++ F+ +S+ L++
Sbjct: 278 ISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGL-VTALTFSPDSRCLVSV 336
Query: 313 GLDSSIKL 336
DS +L
Sbjct: 337 SFDSRARL 344
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTS 312
+++ S +GK A G+ +G V + D+ + AH G V+++ F+ +S+ L++
Sbjct: 278 ISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGL-VTALTFSPDSRCLVSV 336
Query: 313 GLDSSIKL 336
DS +L
Sbjct: 337 SFDSRARL 344
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAH 252
HK VN++ F+ G SGS D V LWD +F + H
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGH 101
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSS 327
F P +Y SGS G + +W D V+ + + L +SG++S
Sbjct: 342 FGPRSEYVVSGSDCGRIFIWRKKGGELIRVM--EADRHVVNCIEPHPHIPVLASSGIESD 399
Query: 328 IKLW 339
IK+W
Sbjct: 400 IKVW 403
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 32.3 bits (70), Expect = 0.21
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK ++ +K+S + + ASG D + +W+ S + F + V ++A++ +
Sbjct: 291 HKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRF--CEHAAAVKAIAWSPHHFG 348
Query: 301 LLTSG---LDSSIKLWELASS 354
LL SG D I+ W ++
Sbjct: 349 LLASGGGTADRCIRFWNTTTN 369
Score = 31.9 bits (69), Expect = 0.28
Identities = 25/116 (21%), Positives = 56/116 (48%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G H+ TS ++++DV +C H R V ++ +S + +SGS D S+
Sbjct: 221 GTHLAIGTSSGTVQIWDVL--RCKNIRTMEGHRLR-VGALAWSSS--VLSSGSRDKSILQ 275
Query: 205 WDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQY 372
D + + H SE+ + ++ +++ L + G D+ + +W S++ ++++
Sbjct: 276 RDIRTQEDHVSKLKGHK-SEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRF 330
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 32.3 bits (70), Expect = 0.21
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ + ++ P+G+ SGS+D S+KLW T + D V +A + +
Sbjct: 150 HQSPIQAVIRLPSGE-LVSGSSDASLKLWK--GKTSLQTLSGHTD--TVRGLAVMPDLGF 204
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L S D SI+LW L S L++ G
Sbjct: 205 LSASH-DGSIRLWAL-SGEVLLEMVG 228
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 32.3 bits (70), Expect = 0.21
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
H+ + ++ P+G+ SGS+D S+KLW T + D V +A + +
Sbjct: 150 HQSPIQAVIRLPSGE-LVSGSSDASLKLWK--GKTSLQTLSGHTD--TVRGLAVMPDLGF 204
Query: 301 LLTSGLDSSIKLWELASSRCLIQYTG 378
L S D SI+LW L S L++ G
Sbjct: 205 LSASH-DGSIRLWAL-SGEVLLEMVG 228
>At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 512
Score = 32.3 bits (70), Expect = 0.21
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +1
Query: 106 VPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD-TVSNRCFNTF----ANAHDGSEV- 267
V +H H +NSI + +G+ F S D + LW+ +SN+ FN A D SEV
Sbjct: 227 VYAHAHDYHINSISNNSDGETFISAD-DLRINLWNLEISNQSFNIVDVKPAKMEDLSEVI 285
Query: 268 SSVAF-TRNSKYLLTSGLDSSIKLWELASS 354
+S F + L S SI+L +L S
Sbjct: 286 TSAEFHPTHCNMLAYSSSKGSIRLIDLRQS 315
>At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 513
Score = 32.3 bits (70), Expect = 0.21
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +1
Query: 106 VPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD-TVSNRCFNTF----ANAHDGSEV- 267
V +H H +NSI + +G+ F S D + LW+ +SN+ FN A D SEV
Sbjct: 228 VYAHAHDYHINSISNNSDGETFISAD-DLRINLWNLEISNQSFNIVDVKPAKMEDLSEVI 286
Query: 268 SSVAF-TRNSKYLLTSGLDSSIKLWELASS 354
+S F + L S SI+L +L S
Sbjct: 287 TSAEFHPTHCNMLAYSSSKGSIRLIDLRQS 316
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Frame = +1
Query: 121 HKRQVNSIKF---SPNGKYFASGSADGSVKLWDTVSNRCFNTF---ANAHDGSEVSSVAF 282
HK V ++F SPN ASG+ DG+V +WD + + + ++ SE+SS+++
Sbjct: 114 HKGPVRGLEFNVKSPN--QLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSW 171
Query: 283 TRNSKYLLTS-GLDSSIKLWELASSRCL 363
+ +++L S + + +W++ + + +
Sbjct: 172 NKGFQHVLASTSHNGTTVIWDVNNEKII 199
Score = 31.9 bits (69), Expect = 0.28
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 172 ASGSADGSVKLWDTVSNRCFNTFANAHDGSE----VSSVAFTRNSKYLLTSGL-DSSIKL 336
A G DG++ LW+ +S+ A+ D S+ V + F S L SG D ++ +
Sbjct: 84 AGGLVDGNIGLWNPISSES-GEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCI 142
Query: 337 WELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTW 483
W+LA+ Y + Q ++ +N +VL + W
Sbjct: 143 WDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIW 191
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 32.3 bits (70), Expect = 0.21
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Frame = +1
Query: 106 VPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD-TVSNRCFNTF----ANAHDGSEV- 267
V +H H +NSI S +G+ F S D V LW+ +SN+ FN N D +EV
Sbjct: 215 VYAHAHDYHINSISNSSDGETFISAD-DLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVI 273
Query: 268 SSVAF-TRNSKYLLTSGLDSSIKLWELASSRCLIQYT 375
+S F + L S SI+L ++ S +T
Sbjct: 274 TSAEFHPIHCNMLAYSSSKGSIRLIDMRQSALCDSHT 310
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 121 HKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVS-SVAFTRNS 294
HKR + ++F + +Y A+G D S+K WD + + T + G + S + F +
Sbjct: 596 HKRSLGVVQFDTTKNRYLAAGD-DFSIKFWDMDAVQLL-TAIDGDGGLQASPRIRFNKEG 653
Query: 295 KYLLTSGLDSSIKL 336
L SG ++ IK+
Sbjct: 654 SLLAVSGNENVIKI 667
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 127 RQVNSIKFSPNG-KYFASG-SADGS--VKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
R ++ +S +G + F+ G S DG + W+ T+ H S + V F
Sbjct: 551 RWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRS-LGVVQFDTTK 609
Query: 295 KYLLTSGLDSSIKLWELASSRCLIQYTGAG 384
L +G D SIK W++ + + L G G
Sbjct: 610 NRYLAAGDDFSIKFWDMDAVQLLTAIDGDG 639
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 121 HKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVS-SVAFTRNS 294
HKR + ++F + +Y A+G D S+K WD + + T + G + S + F +
Sbjct: 596 HKRSLGVVQFDTTKNRYLAAGD-DFSIKFWDMDAVQLL-TAIDGDGGLQASPRIRFNKEG 653
Query: 295 KYLLTSGLDSSIKL 336
L SG ++ IK+
Sbjct: 654 SLLAVSGNENVIKI 667
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 127 RQVNSIKFSPNG-KYFASG-SADGS--VKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
R ++ +S +G + F+ G S DG + W+ T+ H S + V F
Sbjct: 551 RWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRS-LGVVQFDTTK 609
Query: 295 KYLLTSGLDSSIKLWELASSRCLIQYTGAG 384
L +G D SIK W++ + + L G G
Sbjct: 610 NRYLAAGDDFSIKFWDMDAVQLLTAIDGDG 639
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.28
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 4 CVAFHPLGDHIIASTSHP-VIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFAS 177
C+ FHP ++I+ S I ++D + + V + H QVN+++FSP N S
Sbjct: 176 CLEFHPTKNNILLSGDKKGQIGVWDF--GKVYEKNVYGNIHSVQVNNMRFSPTNDDMVYS 233
Query: 178 GSADGSVKLWD 210
S+DG++ D
Sbjct: 234 ASSDGTIGYTD 244
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSP-NGKYFASGSADGSVKLWDTV 216
HKR VNS FSP +G + D +++WD++
Sbjct: 356 HKRVVNSAYFSPSSGTKILTTCQDNRIRIWDSI 388
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 31.9 bits (69), Expect = 0.28
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +1
Query: 4 CVAFHPLG--DHIIA-STSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFA 174
CV + P G D +I+ + V D + V S + ++ ++P+
Sbjct: 125 CVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSV 184
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD-SSIKLWELAS 351
+ +++ S++ WD + + N+ AH V +V + +++L S D S I LW+L
Sbjct: 185 AATSESSIQFWDLRTMKKNNSIERAH----VRNVDYNLKREHILVSADDESGIHLWDLRK 240
Query: 352 SRCLIQ 369
++ +Q
Sbjct: 241 TKFPVQ 246
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 31.9 bits (69), Expect = 0.28
Identities = 22/103 (21%), Positives = 49/103 (47%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
SGS D ++K+W ++C + AHD + V++V + + T D ++K+W+
Sbjct: 262 SGSWDKTLKVWRLSDSKCLESI-EAHDDA-VNTVV-SGFDDLVFTGSADGTLKVWKREVQ 318
Query: 355 RCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSLCTW 483
+++ KQ++ A+ + D V++ + ++ W
Sbjct: 319 GKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFW 361
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
GS+DG+V W+ + + T G ++ + LL+ G D +I +W+
Sbjct: 352 GSSDGTVNFWE---RQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWK 403
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 265 VSSVAFTRNSKYLLTSGLDSSIKLWELASSRCL 363
VS ++ + L + D ++K+W L+ S+CL
Sbjct: 248 VSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCL 280
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 31.9 bits (69), Expect = 0.28
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLW--DTVSNRCFNTFANAHDGSEVSSVAFTRNS 294
H VNS+ + + + +GSADG+VK+W + R ++ E + A +
Sbjct: 176 HDDAVNSVTTAESLVF--TGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSH 233
Query: 295 KYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHTEDYVLFPDEATTSL 474
+ + D ++ WE+ + L+++ K+ LA + +LF A +
Sbjct: 234 MAVYSGSSDGAVNFWEMGDKK-LLKHC---EVFKKHRLA-VLCIAAAGKLLFSGAADKKI 288
Query: 475 CTWHSR-SASRCPLISLGH 528
C W C + GH
Sbjct: 289 CVWRREGKVHTCVSVLTGH 307
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 106 VPSHHHKRQVNSIKFSP-NGKYFASGSADGSVKLWDTVSNR 225
+PS H KR + S+ SP N + FA+ + DG+V W S+R
Sbjct: 333 LPSCHTKR-MRSLALSPSNRELFATSALDGAVHFWKLQSDR 372
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 61 IRLYDVTTSQC----FVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
+RLYDV Q F S + + + +SP+G + +SGSAD + ++D
Sbjct: 557 LRLYDVRLPQTELFSFGWKQESSESQSALINQSWSPDGLHISSGSADPVIHIFD 610
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.5 bits (68), Expect = 0.37
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD-----------TVSNRCFNTFANAHDG--S 261
H +Q ++ S +G+Y A+G D V LWD +N+ ++ A G
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCG 264
Query: 262 EVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQ 369
VSS+ F + L + D ++ +W A R I+
Sbjct: 265 IVSSLCFREGTAELFSGSYDGTLSIWN-AEHRTYIE 299
Score = 30.7 bits (66), Expect = 0.64
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 15/86 (17%)
Frame = +1
Query: 157 NGKYFASGSADGSVKLWDTVSNRCFNTFANAH------DG---------SEVSSVAFTRN 291
N F SGS +GS+ LW + + NAH D S VSSVA R
Sbjct: 359 NSDEFLSGSDNGSIALWSILKKKPVFIVNNAHHVIADHDSVNHNCTPACSWVSSVAVCRG 418
Query: 292 SKYLLTSGLDSSIKLWELASSRCLIQ 369
S+ + + ++LW + S IQ
Sbjct: 419 SELAASGAGNGCVRLWGVESGSSAIQ 444
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
SGS D ++K+W ++C + AHD + +++VA L T D ++K+W+
Sbjct: 266 SGSWDKTLKVWRLSDSKCLESI-QAHDDA-INTVA-AGFDDLLFTGSADGTLKVWK 318
>At5g67090.1 68418.m08459 subtilase family protein contains
similarity to subtilisin-like protease ag12 GI:757522
from [Alnus glutinosa]
Length = 736
Score = 31.1 bits (67), Expect = 0.48
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 238 FANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQ 399
F +D V+S A + +++TSG + W L + I GAGT G+Q
Sbjct: 288 FGLENDPIAVASFAAIQKGVFVVTSGGNDGPYYWSLINGAPWIMTVGAGTIGRQ 341
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 154 PNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
PNG FA+G+ D + ++WDT + G+ V S+ FT + +Y+
Sbjct: 329 PNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGA-VRSIRFTSDGRYV 377
Score = 27.9 bits (59), Expect = 4.5
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
A+HP G R++D V + + V SI+F+ +G+Y A
Sbjct: 326 AWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGN--LGAVRSIRFTSDGRYVAMAEPA 383
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
V ++DT S + E+S ++F+ +++ L
Sbjct: 384 DFVHIYDTKSG--YKKEQEIDFFGEISGISFSPDTESL 419
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 154 PNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
PNG FA+G+ D + ++WDT + G+ V S+ FT + +Y+
Sbjct: 323 PNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGA-VRSIRFTSDGRYV 371
Score = 27.9 bits (59), Expect = 4.5
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
A+HP G R++D V + + V SI+F+ +G+Y A
Sbjct: 320 AWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGN--LGAVRSIRFTSDGRYVAMAEPA 377
Query: 190 GSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
V ++DT S + E+S ++F+ +++ L
Sbjct: 378 DFVHIYDTKSG--YKKEQEIDFFGEISGISFSPDTESL 413
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKY 300
HK +V +K+S + + ASG D + +W+ S + ++ H + V ++A++ +
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSE-HTAA-VKAIAWSPHVHG 391
Query: 301 LLTSG---LDSSIKLWELASS 354
LL SG D I+ W ++
Sbjct: 392 LLASGGGTADRCIRFWNTTTN 412
Score = 30.7 bits (66), Expect = 0.64
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 25 GDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKL 204
G H+ TS ++++D S+C H R V ++ + + +SGS D S+
Sbjct: 264 GTHLAVGTSTGKVQIWDA--SRCKRTRTMEGHRLR-VGALAWGSS--VLSSGSRDKSILQ 318
Query: 205 WDTVSNRCFNTFANAHDG--SEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYT 375
D RC + G SEV + ++ +++ L + G D+ + +W S++ +++Y+
Sbjct: 319 RDI---RCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYS 374
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 160 GKYFASGSADGSVKLW--DTVSNRCFNTFANAHDGSEVSSVAFTRN--SKYLLTS-GLDS 324
G+ SGSAD S+ LW + C + H+G A N + ++L S GLD
Sbjct: 328 GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDK 387
Query: 325 SIKLW 339
S+++W
Sbjct: 388 SLRVW 392
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/62 (17%), Positives = 29/62 (46%)
Frame = +1
Query: 163 KYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWE 342
KY G D S++ ++ +T N H+ +++ + + + ++T D + +W
Sbjct: 3299 KYITWGFPDRSLRFMSYDQDKLLSTHENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWR 3358
Query: 343 LA 348
++
Sbjct: 3359 VS 3360
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 30.7 bits (66), Expect = 0.64
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 118 HHKRQVNSIKFSP-NGKYF-ASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAF 282
H R++ S+ ++ NG ASGS DG+V++WD + G+ + SV F
Sbjct: 164 HGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEF 220
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.7 bits (66), Expect = 0.64
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-----YLLTSG-LDSSIKL 336
S S DG+VK+W + HDG V+S F + + L+T G L+ IK+
Sbjct: 358 SSSVDGTVKIWQDRKTQPL-VVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIKI 416
Query: 337 W 339
W
Sbjct: 417 W 417
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/61 (19%), Positives = 30/61 (49%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
SG +DGS+++W+ + S V+ + + + +L+ D +I++W++
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKG 927
Query: 355 R 357
+
Sbjct: 928 K 928
Score = 30.3 bits (65), Expect = 0.85
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR 225
HK V S G+ SGSAD ++++W V +
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGK 928
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 85 SQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR 225
SQC +P + ++ + +SP+G Y + + D + KLW S++
Sbjct: 359 SQCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWSSSQ 405
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 241 ANAHDGSEVSSVAFTRNSKYLLTSGLD----SSIKLWELASSRCLIQY 372
A AH G+ + S+ + + + TSG+D S++ WELAS C+ Y
Sbjct: 229 ARAHHGA-LRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSY 275
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 CPVPSHHHKRQVNSIKF-SPNGKYFASGSADGSVKLWDTVSNRCFNTFANA-HDGSEVSS 273
C H H+ VN I S GK S DG++ +W++ + + + F+ + D + SS
Sbjct: 271 CVSSYHAHEEVVNDIGILSSTGKV---ASCDGTIHVWNSQTGKLISLFSESPSDQDQASS 327
Query: 274 VAFTRNS 294
++N+
Sbjct: 328 DPSSKNN 334
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites
at intron 18
Length = 1606
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSAD 189
AFHP + I + +DV+T + + + + + + SI + P + + S D
Sbjct: 209 AFHPTLEWIFVGDRRGTLLAWDVSTERPNMIGI-TQVGSQPITSISWLPMLRVLVTVSKD 267
Query: 190 GSVKLWDT 213
GS+++W T
Sbjct: 268 GSLQVWKT 275
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-----YLLTSG-LDSSIKL 336
S S DG++K+W + HDG VSS F + + L+T G L+ +K+
Sbjct: 339 SSSVDGTIKIWQDRKAQPL-VVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMKI 397
Query: 337 W 339
W
Sbjct: 398 W 398
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-----YLLTSG-LDSSIKL 336
S S DG++K+W + HDG VSS F + + L+T G L+ +K+
Sbjct: 374 SSSVDGTIKIWQDRKAQPL-VVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMKI 432
Query: 337 W 339
W
Sbjct: 433 W 433
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 30.3 bits (65), Expect = 0.85
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 LCVAFHPLGDHI-IASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
LCV + P + + S + V Y + +V + H+ V S+ + PN A+
Sbjct: 103 LCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLAT 162
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGS 261
S DG +++ T +A+ +G+
Sbjct: 163 TSTDGKCRVFSTFIKGVDTKYAHYLNGA 190
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 148 FSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD-S 324
+ P+ + + + SV+ WD + + N+ +AH V V + +++L + D S
Sbjct: 176 WDPHDVNAVAATGESSVQFWDLRTMKKVNSIEHAH----VRGVDYNPKREHILVTAEDES 231
Query: 325 SIKLWELASSRCLIQ 369
I +W+L ++ +Q
Sbjct: 232 GIHVWDLRKAKVPVQ 246
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 4 CVAFHPLGDHIIAS-TSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSP-NGKYFAS 177
C+AF+P + ++A+ ++ ++L+D+ + S HK +V + ++P N AS
Sbjct: 278 CLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDS--HKEEVFQVGWNPKNETILAS 335
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDG 258
+ +WD T +A DG
Sbjct: 336 CCLGRRLMVWDLSRIDEEQTVEDAEDG 362
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 4 CVAFHPLGDHIIA-STSHPVIRLYDVTTSQCFVCPVPS-HHHKRQVNSIKFSPNGKYFAS 177
CV F P G +A + +YD+ V P + H + V+ ++F G +
Sbjct: 74 CVEFDPSGGPAVAVGCADRKGYVYDIRK---LVDPALTLQGHTKTVSYVRFLDGGTVVTA 130
Query: 178 GSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRN 291
G+ DG +KLW R T+ + ++ RN
Sbjct: 131 GT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRN 167
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASS 354
SGS D SV++WD S +C T ++ V +A + TSG S + +W+++S
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKTLRHS---DWVWGLA-PHETTLASTSG--SDVYIWDVSSE 325
Query: 355 R--CLIQYTGAGTTGK--QDHLAQAIFNHTED 438
+I GTT + H +F ED
Sbjct: 326 TPLAIIPDAHEGTTYSLARSHTGDFLFTGGED 357
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 LCVAFHPLGDHI-IASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
LCV + P + + S + V Y + +V + H+ V S+ + PN A+
Sbjct: 103 LCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLAT 162
Query: 178 GSADGSVKLWDT 213
S DG +++ T
Sbjct: 163 TSTDGKCRVFST 174
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 LCVAFHPLGDHI-IASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFAS 177
LCV + P + + S + V Y + +V + H+ V S+ + PN A+
Sbjct: 103 LCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLAT 162
Query: 178 GSADGSVKLWDT 213
S DG +++ T
Sbjct: 163 TSTDGKCRVFST 174
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWD-TVSNRCFNT---FANAHDGSEVSSVAFTRNSKY 300
++S+ FSP + S D V+ W+ T S+ + + +HD + S A+ +
Sbjct: 29 ISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCS-AWKDDGTT 87
Query: 301 LLTSGLDSSIKLWELAS 351
+ T G D K+W L S
Sbjct: 88 VFTGGCDKQAKMWPLLS 104
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 157 NGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNS--KYLLTSGLDSSI 330
+G A GS DG +++ ++ + + H GS + F +S L++ G D +
Sbjct: 100 DGPLVAFGSTDGVIRVLSMITWKLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLL 159
Query: 331 KLW 339
LW
Sbjct: 160 VLW 162
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANA------HDGSEVSSVAFTRNS 294
++S+ FSP + S D V+ W+ +R + A+A HD + S A+ +
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEI--SRSGASLASAPKASISHDQPVLCS-AWKDDG 84
Query: 295 KYLLTSGLDSSIKLWELAS 351
+ + G D K+W L S
Sbjct: 85 TTVFSGGCDKQAKMWPLLS 103
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 133 VNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSS 273
VNS+ F P FA+ +DG+ WD S + + + SS
Sbjct: 249 VNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSS 295
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNR 225
HHK V+ + + + A+GS D +V +WD + R
Sbjct: 1044 HHKDVVSCVAVTADSTILATGSYDTTVMVWDILRMR 1079
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 124 KRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDG-SEVSSVAFTRNSKY 300
K+ ++F + +F + DG +K WD ++N T +A G + + F ++
Sbjct: 586 KKLAGVVQFDTSKNHFLAVGEDGQIKFWD-MNNINVLTSTDAEGGLPALPHLRFNKDGNL 644
Query: 301 LLTSGLDSSIKL 336
L + D+ K+
Sbjct: 645 LAVTTADNGFKI 656
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 250 HDGSEVSSVAF-TRNSKYLLTSGLDSSIKLWELASSRCLI 366
H GS V+S+ F + LL I LWELA+ L+
Sbjct: 343 HQGSTVTSMEFYPMQNTLLLVGSATGEITLWELAARERLV 382
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 139 SIKFSPNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
S + PNG+ A+G+ D + +LWD V N + + + ++ FT + ++L
Sbjct: 324 SSAWHPNGQILATGNQDTTCRLWD-VRNLSQSLKVLKGNMGAIRALRFTSDGRFL 377
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 10 AFHPLGDHIIASTSHPVIRLYDVTT-SQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
A+HP G + RL+D+ S+ F + + +KF+P G++ A
Sbjct: 297 AWHPNGLILATGNQDTACRLWDIRNPSESFAV---LKGNMGAIRGLKFTPEGRFLAMAEP 353
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLD 321
V ++DT S F E++ ++F+ +++ L D
Sbjct: 354 ADFVHIFDTQSG--FLQSQEIDLFGEIAGISFSPDTEALYVGVAD 396
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
HK + + PNG A+G+ D + +LWD
Sbjct: 289 HKDYSFASAWHPNGLILATGNQDTACRLWD 318
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSV 198
H VN I F G+Y S S DGSV
Sbjct: 97 HTAPVNDINFDTEGEYIGSCSDDGSV 122
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
H ++V+ I + + FAS SADGSV+++D
Sbjct: 174 HDKEVHDIAWG-EARVFASVSADGSVRIFD 202
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
H ++V+ I + + FAS SADGSV+++D
Sbjct: 174 HDKEVHDIAWG-EARVFASVSADGSVRIFD 202
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWD 210
H ++V+ I + + FAS SADGSV+++D
Sbjct: 174 HDKEVHDIAWG-EARVFASVSADGSVRIFD 202
>At4g11950.1 68417.m01901 hypothetical protein
Length = 327
Score = 28.3 bits (60), Expect = 3.4
Identities = 28/129 (21%), Positives = 46/129 (35%)
Frame = +1
Query: 7 VAFHPLGDHIIASTSHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSA 186
VA +P +++ + +P+ L +S+ P P+ V F+ NG
Sbjct: 145 VAVNPYEVNVMGTEQNPI--LIKFLSSEASGSPKPNTKKNSSVLCACFTSNGNITFREQV 202
Query: 187 DGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI 366
V L + + AHD S T +S LT G + W++A +
Sbjct: 203 SAYVCLGTRQGH--YALVIRAHDSGGGGSTVVTPSSSPALTDGGGGKLSRWKVAVGSVIG 260
Query: 367 QYTGAGTTG 393
GA G
Sbjct: 261 SIIGAFLLG 269
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 118 HHKRQVNSIKFSPNGKYFASGSADGSVKLW 207
HH + F PN + A+G G V +W
Sbjct: 190 HHTELITVFAFHPNQRILAAGDVTGRVLIW 219
>At3g26250.1 68416.m03275 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 490
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 110 HRTIIRDKSILLNSRRTVSISRAVALTVP*NYGTLSPIGVSIHSR 244
H T + K + L R + SISR L +P G PI S H+R
Sbjct: 396 HITCMLGKDLYLKPRSSWSISRGSLLILPNFMGISRPICSSCHNR 440
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 28.3 bits (60), Expect = 3.4
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +1
Query: 61 IRLYDVTTSQCFVCPVPSHHHKRQVNSIKFSPNGKYFASGSADGSVKLWD----TVSNRC 228
I +YDV + PV S V S+KF+ NG+ + AD ++++D S R
Sbjct: 461 IHIYDVKRN---FDPVGSVCGSAAVTSVKFACNGRKMLTSGAD-RLQMFDVNRKASSVRL 516
Query: 229 FNTFANAHDGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSR 357
+ + VA S ++T G D I ++++ S +
Sbjct: 517 SPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIESGK 559
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +1
Query: 175 SGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSK-------YLL-TSGLDSSI 330
+G D ++ WDT S + + +AH V TRN YL+ ++ D I
Sbjct: 229 TGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDGII 288
Query: 331 KLWEL 345
++W++
Sbjct: 289 RVWDV 293
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 49 SHPVIRLYDVTTSQCFVCPVPSHHHKRQVNSIKF-SPNGKYFA----SGSADGSVKLWDT 213
S I LYD+ ++ + + H+H + ++ F +P+ F S +ADGSV ++DT
Sbjct: 59 SDDTIHLYDLPSASS-LGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDT 117
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +1
Query: 154 PNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
P+G F++G+ D + ++WD + T + G+ + S+ +T + KY+
Sbjct: 329 PDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGA-IRSIRYTSDGKYM 377
>At2g27900.1 68415.m03382 expressed protein
Length = 1124
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -1
Query: 489 RVPSTKRRRCLIREQNVIFRVVEYRLS*VVLFTSCPGACILYETS-ATSQL 340
+ P +K R+CL+R V+F+++ Y ++ FT A IL S AT+Q+
Sbjct: 391 QTPESKFRQCLLRTLAVLFQLI-YSYHEIMSFTPEKEAEILVSPSLATTQM 440
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 430 TEDYVLFPDEATTSLCTWHSRSASRCPLISLGHN 531
TE+YV+ + +S C + +CP + +GHN
Sbjct: 971 TEEYVILANPCISS-CIMELKKIPKCPHLVIGHN 1003
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDT 213
HK V S+ +G S S D ++ LW+T
Sbjct: 204 HKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDT 213
HK V S+ +G S S D ++ LW+T
Sbjct: 204 HKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 121 HKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSN 222
H+ +V +++ +G AS +DG VKLW + N
Sbjct: 279 HQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLN 312
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 274 VAFTRNSKYLLTSGL-DSSIKLWELASSRCLIQYT 375
V+ R K LL +G+ D ++LW L S +C+ +Y+
Sbjct: 121 VSQCRMKKGLLLTGVGDKVMRLWSLKSYKCMEEYS 155
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 112 SHHHKRQVNSIKFSPNGKYFASGSADGSVKLWDTVSNRC-FNTFANAHDGSEVSSVAFTR 288
S+ H+ V + S ++F SGS DG +K W F +H G + +A +
Sbjct: 66 SYMHRDVVTHVAVSA-AEFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLG-PIEGLAVSI 123
Query: 289 NSKYLLTSGLDSSIKLWELAS 351
+ T D ++K++++ +
Sbjct: 124 DGLLCCTISNDHAVKIYDVVN 144
>At3g03620.1 68416.m00365 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296
Length = 500
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 253 DGSEVSSVAFTRNSKYLLTSGLDSSIKLWELASSRCLIQYTGAGTTGKQDHLAQAIFNHT 432
+GS+ + R S YL T K+W +A L + T G+ +AQA H+
Sbjct: 14 EGSDAEGQSNNRESIYLRTKVWSEVNKMWRIALPSSLFRMTSFGSI----IVAQAFIGHS 69
Query: 433 ED 438
+
Sbjct: 70 SE 71
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +1
Query: 154 PNGKYFASGSADGSVKLWDTVSNRCFNTFANAHDGSEVSSVAFTRNSKYL 303
P+G F++G+ D + ++WD + N + + + S+ +T + KY+
Sbjct: 327 PDGFTFSTGNQDKTCRVWD-IRNLSKSVAVLRGNLGAIRSIRYTSDGKYM 375
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,093,590
Number of Sequences: 28952
Number of extensions: 244797
Number of successful extensions: 1646
Number of sequences better than 10.0: 245
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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