Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F23
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    48   5e-08
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   0.53 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.8  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   2.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   8.7  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    20   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 47.6 bits (108), Expect = 5e-08
 Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2    GKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVWSHNAKPL--S 175
            G+P K        S P      +      + +DVT+PC   GLP P + W         S
Sbjct: 1291 GQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTS 1350

Query: 176  GGRATVSDSGLVIKGVQKGDTGYYGCRATNEHGDKYFETLLQVN 307
                   D  L I+ V + + G Y C   N++G       L VN
Sbjct: 1351 DKIRQQPDGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVN 1394



 Score = 39.5 bits (88), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
 Frame = +2

Query: 92  GQDVTIPCKVTGLPAPKVVWSHNAKPLSGGR----------ATVSDSGLVIKGVQKGDTG 241
           G D  + CK  G P P V W   A  +S G             V D  L I  +QK + G
Sbjct: 713 GSDAAVECKADGFPRPVVTWKR-ATGVSPGDYKDFKPNNPDIKVEDGTLTINNIQKTNEG 771

Query: 242 YYGCRATNEHG 274
           YY C A N  G
Sbjct: 772 YYLCEAVNGIG 782



 Score = 35.5 bits (78), Expect = 2e-04
 Identities = 23/80 (28%), Positives = 35/80 (43%)
 Frame = +2

Query: 29  LTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVWSHNAKPLSGGRATVSDSGL 208
           LTV +  K + +P+ V  +  G+  T  C   G P   + W  +  P+    A      L
Sbjct: 322 LTVTAPLKAKIEPQ-VQTIDFGRPATFTCNFEGNPIKTISWLKDGHPIDHNEAV-----L 375

Query: 209 VIKGVQKGDTGYYGCRATNE 268
            I+ V+K D G Y C   N+
Sbjct: 376 RIESVRKEDKGMYQCFIRND 395



 Score = 32.7 bits (71), Expect = 0.002
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
 Frame = +2

Query: 23   LKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVWSHNAK---PLSGGRATV 193
            ++++V + P+++ K       + G    + C+  G     ++W+ N K   P    R T+
Sbjct: 789  IQISVQAPPQFDIKLRNQ-TSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTI 847

Query: 194  SD--------SGLVIKGVQKGDTGYYGCRATNEHG 274
             +        SGL IK  ++ D+  + C ATN  G
Sbjct: 848  REEILANGVLSGLSIKRTERSDSALFTCVATNAFG 882



 Score = 31.9 bits (69), Expect = 0.003
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = +2

Query: 95  QDVTIPCKVTGLPAPKVVWSHNAKPLSGGRA-TVSD------SGLVIKGVQKGDTGYYGC 253
           Q+V + C   G P+P   W    +  +  +A T++D        L+I+  +  D+G Y C
Sbjct: 248 QNVALLCPAQGFPSPSFRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLC 307

Query: 254 RATNEHGDKYFETLLQV 304
              N  G +  ET+L V
Sbjct: 308 VVNNSVGGESVETVLTV 324



 Score = 30.3 bits (65), Expect = 0.008
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
 Frame = +2

Query: 83  VKHGQDVTIPCKVTGLPAPKVVWSHNAKPLS-------GGRATVSD---SGLVIKGVQKG 232
           V+ G  V + C  +G P P++ W    + LS       G   TV+    S L I  +   
Sbjct: 425 VQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTN 484

Query: 233 DTGYYGCRATNEHG 274
           D G Y C A+++ G
Sbjct: 485 DGGLYRCVASSKVG 498



 Score = 25.8 bits (54), Expect = 0.17
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +2

Query: 41  SAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 151
           S P + ++P   I   +     + C   G P P ++W
Sbjct: 21  SGPVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIW 57


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 383 VFYRNAQLSFKSFTYFDSVIHVNLFS*LVEGSRSIY 276
           VFY N    F S      V+ + +FS  +  S  +Y
Sbjct: 69  VFYENVNFQFGSILALFGVVQIYIFSGFIVPSGVVY 104


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 379 FIETHNCHLSLLRILTVSF 323
           F+E    H S+L IL +SF
Sbjct: 148 FVELTVAHASVLTILAISF 166


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 379 FIETHNCHLSLLRILTVSF 323
           F+E    H S+L IL +SF
Sbjct: 148 FVELTVAHASVLTILAISF 166



 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 216 LMTRPLSLTVALPPLRGFALWL 151
           L T  LS  + L P R F LW+
Sbjct: 292 LGTVVLSFFLCLIPFRVFILWI 313


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   RQTPKALFEIDCSQCTEVRAE 63
           +  P A+ E DCS+C+E + E
Sbjct: 67  KNMPDAI-ETDCSKCSEKQKE 86


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 385 QFFIETHNCHLSLLRILTV 329
           QF IE   C++SLL ++ +
Sbjct: 273 QFNIEMFLCNMSLLTVIPI 291


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 TSTEINTSRPFYKL 305
           T TE + ++P+YKL
Sbjct: 436 TPTENSPTKPYYKL 449


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 379 FIETHNCHLSLL 344
           F+E  NCHL  +
Sbjct: 169 FLERENCHLKFV 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,548
Number of Sequences: 336
Number of extensions: 2006
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)