Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_F22
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 257 2e-68
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 257 2e-68
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 257 2e-68
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 257 2e-68
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 257 2e-68
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 257 2e-68
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 200 3e-51
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 173 2e-43
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 97 4e-20
U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-cryst... 31 3.2
AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1 pr... 31 3.2
AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1 pr... 31 3.2
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 7.3
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 7.3
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 7.3
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 7.3
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 7.3
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 7.3
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 7.3
BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein. 29 9.7
BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein. 29 9.7
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 29 9.7
AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein FL... 29 9.7
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 9.7
AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain con... 29 9.7
AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain con... 29 9.7
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 9.7
AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain con... 29 9.7
AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain con... 29 9.7
AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 9.7
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 9.7
AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain con... 29 9.7
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 9.7
AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens ... 29 9.7
AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransfera... 29 9.7
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 257 bits (629), Expect = 2e-68
Identities = 117/172 (68%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
QI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 125 QIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 257 bits (629), Expect = 2e-68
Identities = 117/172 (68%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
QI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 125 QIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 257 bits (629), Expect = 2e-68
Identities = 117/172 (68%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
QI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 125 QIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 257 bits (629), Expect = 2e-68
Identities = 117/172 (68%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
QI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 125 QIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 257 bits (629), Expect = 2e-68
Identities = 117/172 (68%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
QI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 125 QIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 257 bits (629), Expect = 2e-68
Identities = 117/172 (68%), Positives = 140/172 (81%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
QI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 125 QIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 200 bits (487), Expect = 3e-51
Identities = 89/131 (67%), Positives = 110/131 (83%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G L+EY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 5 GTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYC 64
Query: 181 KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSI 360
++ EKSP+++KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 361 QIIKVEVIKAA 393
QI+ VE I A+
Sbjct: 125 QIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 173 bits (422), Expect = 2e-43
Identities = 78/111 (70%), Positives = 90/111 (81%)
Frame = +1
Query: 184 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 363
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 364 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPNTYF 516
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRPNT+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 96.7 bits (230), Expect = 4e-20
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = +1
Query: 319 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 498
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 499 RPNTYF 516
RPNT+F
Sbjct: 61 RPNTFF 66
>U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-crystallin
like protein protein.
Length = 1637
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1114 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1169
Query: 181 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 300
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1170 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1214
>AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1
protein.
Length = 1723
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1200 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1255
Query: 181 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 300
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1256 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1300
>AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1
protein.
Length = 1723
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 1 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 180
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1200 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1255
Query: 181 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 300
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1256 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1300
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 7.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 63 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 152
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein.
Length = 287
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 76 NGPHLLLRAVRDIEVGEELTICYLDM 101
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 188 ISLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMTSYSF 9
++L S V +N CL D A G +++Y+G S+ EG L+P T Y +
Sbjct: 1874 VNLASVSSGAVRVNLDGCLST----DSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
>AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein
FLJ21080 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 188 ISLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMTSYSF 9
++L S V +N CL D A G +++Y+G S+ EG L+P T Y +
Sbjct: 1874 VNLASVSSGAVRVNLDGCLST----DSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
>AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 188 ISLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMTSYSF 9
++L S V +N CL D A G +++Y+G S+ EG L+P T Y +
Sbjct: 1874 VNLASVSSGAVRVNLDGCLST----DSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
>AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 188 ISLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMTSYSF 9
++L S V +N CL D A G +++Y+G S+ EG L+P T Y +
Sbjct: 1874 VNLASVSSGAVRVNLDGCLST----DSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 188 ISLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMTSYSF 9
++L S V +N CL D A G +++Y+G S+ EG L+P T Y +
Sbjct: 1874 VNLASVSSGAVRVNLDGCLST----DSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
>AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 188 ISLMDTISPVVFLNFFNCLKKYQKRDFATIGSGEKILILYRGGFGSLSEGSLRPMTSYSF 9
++L S V +N CL D A G +++Y+G S+ EG L+P T Y +
Sbjct: 1874 VNLASVSSGAVRVNLDGCLST----DSAVNCRGNDSILVYQGKEQSVYEGGLQPFTEYLY 1929
>AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21080 fis, clone CAS02449. ).
Length = 369
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 158 NGPHLLLRAVRDIEVGEELTICYLDM 183
>AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransferase
protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SGVHNMYREYRDLSVGGAVTQCYRDM 327
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,652,258
Number of Sequences: 237096
Number of extensions: 1549704
Number of successful extensions: 3400
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3400
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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