Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F21
         (389 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g06440.1 68416.m00745 galactosyltransferase family protein co...    29   1.5  
At5g52320.1 68418.m06493 cytochrome P450, putative                     27   5.9  
At1g12600.1 68414.m01463 hypothetical protein                          27   5.9  
At5g48430.1 68418.m05988 expressed protein low similarity to ext...    26   7.8  
At4g01210.1 68417.m00159 glycosyltransferase family protein 1 co...    26   7.8  

>At3g06440.1 68416.m00745 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 619

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 29  LQTQTPLVRELWRESKLHATIIFNNY*MYYNLL 127
           L T   +  E+WRESK +  I F  +  YY LL
Sbjct: 413 LHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLL 445


>At5g52320.1 68418.m06493 cytochrome P450, putative 
          Length = 502

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +1

Query: 226 GTQCYL*KRKCNISYILHSRSVNYHI*NKLNKV 324
           GT   L     NI YIL S  VNY    K NK+
Sbjct: 77  GTDILLTVDPVNIQYILSSNFVNYPKGKKFNKI 109


>At1g12600.1 68414.m01463 hypothetical protein
          Length = 349

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 340 SGFFFPPYLIYSICDN*QTSNVRYTKYYIFFFTNNTVFL 224
           SGFFF  YL+  IC+    + ++++  + F F    V++
Sbjct: 31  SGFFFG-YLVNGICEEYVYNRLKFSYGWYFTFAQGLVYI 68


>At5g48430.1 68418.m05988 expressed protein low similarity to
           extracellular dermal glycoprotein EDGP precursor [Daucus
           carota] GI:285741, SP|P13917 Basic 7S globulin precursor
           {Glycine max}; expression supported by MPSS
          Length = 406

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 373 CSLLVYTHRYVSGFFFPPYLIYS 305
           C +L +T+ YVS  ++PP  + S
Sbjct: 9   CLILFFTYSYVSANYYPPKALVS 31


>At4g01210.1 68417.m00159 glycosyltransferase family protein 1
           contains Pfam profile: PF00534 Glycosyl transferases
           group 1
          Length = 981

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 347 ICVWFFFSTLFNLF 306
           ICV+FFF+ LF +F
Sbjct: 59  ICVFFFFAVLFQMF 72


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,932,642
Number of Sequences: 28952
Number of extensions: 109602
Number of successful extensions: 148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 557595584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)