Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F20
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 380 QKQPESVKNVLRHMLTKSRRN 442
           QKQ E+ + V+RH+  K  R+
Sbjct: 79  QKQKETAEKVIRHLTQKRARD 99


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 169 AQIL*YQLEKECIQTHNFFQLNIGSVHLALERF*RLPVPF 50
           +Q+L +  E +  +TH  F LNI S  + +E   + P P+
Sbjct: 362 SQLLRHVEESDKQRTHQPFLLNIPSEGIKVEPRDKAPSPY 401


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 589 HSQQGQALMLPIEGHP 542
           HS+Q  AL+ P +G P
Sbjct: 245 HSKQNVALLCPAQGFP 260


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 293  APAVNGLTPSDQVLRSAGVYD 231
            AP  N   PSD+V+ ++  YD
Sbjct: 1157 APQDNVSQPSDEVMENSWFYD 1177


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 293  APAVNGLTPSDQVLRSAGVYD 231
            AP  N   PSD+V+ ++  YD
Sbjct: 1157 APQDNVSQPSDEVMENSWFYD 1177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,808
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)