Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F17
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   6.5  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    20   6.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    20   6.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    20   6.5  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    20   8.6  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    20   8.6  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    20   8.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   8.6  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 323 SKLNNIIITKRFTL 282
           +KLNN I  KRF L
Sbjct: 100 TKLNNAIEEKRFEL 113


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 5   CVVLHINLNSIFRLLKLTIFNDEL 76
           C++L +  N I   + ++ FND+L
Sbjct: 94  CMLLLLVANLIILPVAISFFNDDL 117


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 5   CVVLHINLNSIFRLLKLTIFNDEL 76
           C++L +  N I   + ++ FND+L
Sbjct: 94  CMLLLLVANLIILPVAISFFNDDL 117


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 5   CVVLHINLNSIFRLLKLTIFNDEL 76
           C++L +  N I   + ++ FND+L
Sbjct: 94  CMLLLLVANLIILPVAISFFNDDL 117


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 103 YNNYKKLY 110


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 101 YNNYKKLY 108


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 111 YNNYKKLY 118


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 309 YNNHKKVY 286
           YNN+KK+Y
Sbjct: 346 YNNYKKLY 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,881
Number of Sequences: 438
Number of extensions: 1285
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)