Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F16
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ...    30   1.2  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z82286-6|CAB05304.1|  376|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF240777-1|AAF63745.1|  376|Caenorhabditis elegans delta 12 fatt...    28   4.9  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    27   8.6  

>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3b protein.
          Length = 1271

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 415  LSAKAFATRNMPTISHLPSTQHCWWWSRIYVQGQDRCISE 534
            L AK F  R +   SH+    HC +W + Y Q Q R + E
Sbjct: 964  LCAKVFPKRAIALESHVREMDHCIYWIQKYRQAQVRELFE 1003


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 415  LSAKAFATRNMPTISHLPSTQHCWWWSRIYVQGQDRCISE 534
            L AK F  R +   SH+    HC +W + Y Q Q R + E
Sbjct: 964  LCAKVFPKRAIALESHVREMDHCIYWIQKYRQAQVRELFE 1003


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 241  LGSVDLTNQIKLGAATAGLVYDNVNRHGATLTNTHIPGIGD 363
            +G VDL+    LG A    + DNV+ HG  L +   P +GD
Sbjct: 1832 IGKVDLSQNSSLGMAK---LLDNVSVHGILLDSIMDPTVGD 1869


>Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical
           protein F38C2.5 protein.
          Length = 186

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 392 CFITTTMIYPRRRSRPEICPPFPIYHQPNTVGGGLEYMFKDKIGASASAAHTDF 553
           C      + P     P + P F  +  P++   GL   F D  GASAS++ TDF
Sbjct: 136 CQFIHRAVEPTPAQNP-LMPQFSSWFAPSS---GLSREFLDNFGASASSSSTDF 185


>Z82286-6|CAB05304.1|  376|Caenorhabditis elegans Hypothetical
           protein W02A2.1 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 451 TISHLPSTQHCWWWSRIYVQGQDR 522
           TI  LP   H W WSR++   +DR
Sbjct: 179 TIVGLPDGSHFWPWSRLFETTEDR 202


>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +1

Query: 211 TGNENHKLSALGSVDLTNQIKLGAATAGLVYDNVNRHGATLTNTHIPGIGDKLSVAGKVN 390
           T  ENH  SA   +DL     L  A  G++Y  ++RH    +   I    D  ++  K N
Sbjct: 619 TAAENHIKSA---IDLNPTSVLFHANLGILYQRMSRHKEAESQYRIVLALDSKNIVAKQN 675

Query: 391 LFHNNDHD 414
           L    +H+
Sbjct: 676 LQKLEEHN 683


>AF240777-1|AAF63745.1|  376|Caenorhabditis elegans delta 12 fatty
           acid desaturaseFAT-2 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 451 TISHLPSTQHCWWWSRIYVQGQDR 522
           TI  LP   H W WSR++   +DR
Sbjct: 179 TIVGLPDGSHFWPWSRLFETTEDR 202


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +1

Query: 163  TINSDGTSGAMVKVPITGNENHKLSALGSVDLTNQIKLGAATAGLVYDNVNRHGATLTNT 342
            T+ + G++G+ V  P T +     S+  S+  +     G++T+G          +T TN+
Sbjct: 1548 TVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGPTVATTQGSSSTQTNS 1607

Query: 343  H 345
            +
Sbjct: 1608 N 1608


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,674,778
Number of Sequences: 27780
Number of extensions: 312037
Number of successful extensions: 715
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)