Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F15
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z81483-7|CAB03964.2|  338|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 250  IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 372
            IG +DL+    LG A     LDNV+ HG+ L     P  GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 202 GVKVPFAGNDKNIVSAIGSLDLTNRQ 279
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 202 GVKVPFAGNDKNIVSAIGSLDLTNRQ 279
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical
           protein ZK262.11 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 485 LKLGTLAISGIFLVA-KAFAVMSWXSLWKRFTLP 387
           L+  TL I+GIF    +     SW  LWK+F  P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141


>Z81483-7|CAB03964.2|  338|Caenorhabditis elegans Hypothetical
           protein C43D7.6 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 485 LKLGTLAISGIFLVA-KAFAVMSWXSLWKRFTLP 387
           L+  TL I+GIF    +     SW  LWK+F  P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -3

Query: 314 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 141
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 140 ELVNSSGSS 114
           E ++S   S
Sbjct: 589 ENISSDFES 597


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 98  TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 238
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 98  TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 238
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,524,325
Number of Sequences: 27780
Number of extensions: 307688
Number of successful extensions: 826
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)