Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F13
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...   124   7e-31
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...   120   8e-30
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...   117   8e-29
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...   117   1e-28
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.4  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score =  124 bits (299), Expect = 7e-31
 Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 9/157 (5%)
 Frame = +2

Query: 239 FGMDESYNLXXXXXXXX-----XXXXIWGVIRGLETWSQLF--YLTNDFRELRI--NSTD 391
           +G +ESYNL                 I+G   GLET SQL   Y  ND  +  +  +   
Sbjct: 149 WGTNESYNLDLTTTGNQIGVQISAPTIFGARHGLETLSQLMDVYPNNDGTKCLVVTDEAS 208

Query: 392 IYDYPRYAHRGLLLDTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPE 571
           I D P + HRGLLLDT+R++L++SKI K+ID MAA+K+NVLHWHI D QSFP    + P 
Sbjct: 209 ISDAPFFPHRGLLLDTARNFLTVSKIKKHIDGMAASKLNVLHWHITDSQSFPLELPQLPN 268

Query: 572 LSRLGAYHPTLVYTKRDIEIVVKHAAERGVRVLTEVD 682
           +++ GAY    +Y   DI  ++ +A  RGVR++ E+D
Sbjct: 269 MTKFGAYSSDKIYHPEDITNLLGYAKLRGVRIIIEID 305


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score =  120 bits (290), Expect = 8e-30
 Identities = 56/130 (43%), Positives = 89/130 (68%), Gaps = 4/130 (3%)
 Frame = +2

Query: 305 WGVIRGLETWSQLFYLTNDFRE---LRI-NSTDIYDYPRYAHRGLLLDTSRHYLSLSKIL 472
           +G   GLET SQL +  +D+     L++     + D P + +RG++LDT+R+Y+S+  I 
Sbjct: 200 FGARHGLETLSQLIWW-DDYETKGALKVLKGATVQDNPIFPYRGIMLDTARNYMSVESIR 258

Query: 473 KNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVVKHAAE 652
           + +D MAANK+NV HWH+ D QSFP  S++ P+L++ GAY P ++YT  D++ +V++A  
Sbjct: 259 RVLDGMAANKLNVFHWHLTDSQSFPLVSQRVPQLAKNGAYGPDMIYTPEDVKALVEYARI 318

Query: 653 RGVRVLTEVD 682
           RG+RV+ EVD
Sbjct: 319 RGIRVVLEVD 328


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score =  117 bits (282), Expect = 8e-29
 Identities = 55/129 (42%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
 Frame = +2

Query: 302 IWGVIRGLETWSQLFYLTNDFRE--LRINSTDIYDYPRYAHRGLLLDTSRHYLSLSKILK 475
           ++G   GLET +QL  + +D R+  L  N   I D P Y +RG+ LDTSR+++++  I +
Sbjct: 171 VFGGRHGLETLNQLI-IYDDLRDQLLMPNDVSITDEPAYQYRGIALDTSRNFVTVDVIKR 229

Query: 476 NIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVVKHAAER 655
            +D MAA+K+N  HWHI D  SFP+ +E  P+L++ GAY P  VY   ++  +V++  ER
Sbjct: 230 TLDGMAASKLNSFHWHITDSHSFPFTAESLPDLTKYGAYSPKKVYAPEEVAEIVEYGLER 289

Query: 656 GVRVLTEVD 682
           GVRV+ E D
Sbjct: 290 GVRVIPEFD 298


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score =  117 bits (281), Expect = 1e-28
 Identities = 64/186 (34%), Positives = 101/186 (54%), Gaps = 5/186 (2%)
 Frame = +2

Query: 140 RSLDDEAANDERFQGTVQELHVELTAPCEKLPYFGMDESYNLXXXXXXXXX----XXXIW 307
           +SL+     ++   G    +++ L+ P         +ESY L                 +
Sbjct: 121 KSLESLKPGNQSTPGIKLSINIILSDPNTNKLKLNTNESYELTVLKSDSLAVRLSAANFF 180

Query: 308 GVIRGLETWSQLFYLTNDFRELRI-NSTDIYDYPRYAHRGLLLDTSRHYLSLSKILKNID 484
           G   GLET +QL +      ELRI +  +I DYP++ +RG+++DT+R++  +  I K +D
Sbjct: 181 GARHGLETLNQLIWFDEVVNELRILHGVEIRDYPKFPYRGVMIDTARNFFPVDLIRKVVD 240

Query: 485 AMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVVKHAAERGVR 664
            MA  K+NVLH H+ D  SFP    K  EL+R GAY P ++YT +DI  +++++  RGVR
Sbjct: 241 GMAMAKLNVLHLHLTDAVSFPIVLPKVQELARFGAYGPDMIYTPQDIRDLLQYSLVRGVR 300

Query: 665 VLTEVD 682
           +L EVD
Sbjct: 301 LLLEVD 306


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 571 FGKLFTVIRKTLIIDD 524
           FG +FTV R  + IDD
Sbjct: 161 FGHIFTVCRTLIYIDD 176


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 38  CDFLTKALERYQFLVRDLHRITRR 109
           C+F  K   RY    +DL+++ R+
Sbjct: 542 CNFYRKFCARYSAATQDLNKLLRK 565


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +2

Query: 422 GLLLDTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQS 541
           GLL  +++      K++ ++ A+AA     + W I++ ++
Sbjct: 212 GLLSRSNKESQRFLKVIIDLFAIAAQATGFVVWPIIEQRA 251


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +2

Query: 422 GLLLDTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQS 541
           GLL  +++      K++ ++ A+AA     + W I++ ++
Sbjct: 212 GLLSRSNKESQRFLKVIIDLFAIAAQATGFVVWPIIEQRA 251


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +2

Query: 422 GLLLDTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQS 541
           GLL  +++      K++ ++ A+AA     + W I++ ++
Sbjct: 212 GLLSRSNKESQRFLKVIIDLFAIAAQATGFVVWPIIEQRA 251


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +2

Query: 422 GLLLDTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQS 541
           GLL  +++      K++ ++ A+AA     + W I++ ++
Sbjct: 212 GLLSRSNKESQRFLKVIIDLFAIAAQATGFVVWPIIEQRA 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,523
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)