Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_F13
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19048| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_43323| Best HMM Match : Glyco_hydro_20 (HMM E-Value=3.7e-07) 83 2e-16
SB_41834| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 63 2e-10
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 62 5e-10
SB_50888| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 60 2e-09
SB_6796| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_24991| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_28917| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 29 3.5
SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_41335| Best HMM Match : EGF (HMM E-Value=0.0035) 29 4.6
SB_51437| Best HMM Match : RWD (HMM E-Value=1.3e-05) 28 6.1
SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_49545| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_49120| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-08) 28 8.1
SB_16291| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-11) 28 8.1
SB_9818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_56318| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.016) 28 8.1
SB_48972| Best HMM Match : Polysacc_synt_2 (HMM E-Value=3.4e-38) 28 8.1
SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035) 28 8.1
SB_27962| Best HMM Match : Clathrin (HMM E-Value=4.1) 28 8.1
SB_18365| Best HMM Match : EGF (HMM E-Value=0.00021) 28 8.1
SB_13099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_19048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 120 bits (289), Expect = 1e-27
Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Frame = +2
Query: 323 LETWSQLFYLTNDFRELRINSTDIYDYPRYAHRGLLLDTSRHYLSLSKILKNIDAMAANK 502
LET+SQ+ + + D I DYPR+ HR ++DTSRHYL LS I K +DAM+ K
Sbjct: 244 LETFSQIVHQSEDGMYYA-KGNKIEDYPRFHHRAFMIDTSRHYLKLSIIKKFLDAMSYAK 302
Query: 503 MNVLHWHIVDDQSFPYHSEKFPELSRLGAY-HPTLVYTKRDIEIVVKHAAERGVRVLTEV 679
NVLHWH+VDDQSFP+ S+ FP LS G++ + T VY+ D+ ++ +A RG+RV+ E
Sbjct: 303 FNVLHWHVVDDQSFPFQSQTFPSLSDQGSFNNKTHVYSPADVADIIDYARMRGIRVIPEF 362
Query: 680 D 682
D
Sbjct: 363 D 363
>SB_43323| Best HMM Match : Glyco_hydro_20 (HMM E-Value=3.7e-07)
Length = 228
Score = 83.0 bits (196), Expect = 2e-16
Identities = 45/121 (37%), Positives = 71/121 (58%)
Frame = +2
Query: 320 GLETWSQLFYLTNDFRELRINSTDIYDYPRYAHRGLLLDTSRHYLSLSKILKNIDAMAAN 499
G+ET+SQL + L S I D P + HRGL+LDT R + + + +DAM+
Sbjct: 27 GMETFSQLVVDGS----LVYTSVSISDKPSFVHRGLMLDTGRRFFPMDLLYNTLDAMSYV 82
Query: 500 KMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVVKHAAERGVRVLTEV 679
K+NVLH+H+ D F S+ FP+L + + +YT+ D+ +V +A +RG+RV+ EV
Sbjct: 83 KLNVLHFHLSDLCRFSVESKLFPDLRN----NESEIYTQDDVRNLVAYARDRGIRVMPEV 138
Query: 680 D 682
+
Sbjct: 139 E 139
>SB_41834| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 296
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 503 MNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVVKHAAERGVRVLTEVD 682
MNV HWH+ DDQ F S+ +P+L L + L YT+ I+ VVK+AA G+RV+ E+D
Sbjct: 1 MNVFHWHLTDDQGFRIESKVYPKLHELAS--DGLYYTQHQIKDVVKYAARLGIRVIPEID 58
Query: 683 V 685
V
Sbjct: 59 V 59
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/94 (35%), Positives = 53/94 (56%)
Frame = +2
Query: 308 GVIRGLETWSQLFYLTNDFRELRINSTDIYDYPRYAHRGLLLDTSRHYLSLSKILKNIDA 487
GV G++T L L + +E + I D PRY +RG+ LD R+++ + +LK +DA
Sbjct: 1085 GVFYGVQT---LIALAD--KENTVPMVTIKDAPRYGYRGMHLDVGRNFMEKAAVLKLLDA 1139
Query: 488 MAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGA 589
MA KMN H+H+ DD+ + EL+ +G+
Sbjct: 1140 MATYKMNKFHFHLTDDEGWRLEIPGLEELTTVGS 1173
>SB_50888| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 804
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +2
Query: 392 IYDYPRYAHRGLLLDTSRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPE 571
I D PR+ +RG+ +D R+++ S+ILK IDA + K+N LH H+ DD+ + PE
Sbjct: 328 IRDAPRFEYRGMEIDLGRNFMPKSEILKLIDATSMYKLNKLHLHLTDDEGWRLEIPGLPE 387
Query: 572 LSRLGA 589
L+ LG+
Sbjct: 388 LTTLGS 393
>SB_6796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 386 TDIYDYPRYAHRGLLLDTSRHYL-SLSKILKNIDAMAANKMNVLHWHIVDDQSFPYH 553
+ I D+P HRG+LLD S + + ++ +D +++ K+N L ++ + +F H
Sbjct: 461 SQISDWPDVKHRGILLDVSTGRVPKMETLMSLVDILSSAKVNQLQLYMQNTFAFEGH 517
>SB_24991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 458 LSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVV 637
L+K L N+ A + L H V+ Q P H + F ++ + P L Y + D+E+ V
Sbjct: 614 LAKFLPNL-ASVIGPIQQLTRHDVEWQWRPEHDQAFGKIKEFTSKAPVLKYYEPDVELTV 672
Query: 638 K 640
+
Sbjct: 673 Q 673
>SB_28917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 653 SQRRVSLQSLYRVWCTLMLDDK 588
S+++ S S +++WC L+ DDK
Sbjct: 60 SEKKTSADSSFKIWCELLSDDK 81
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = +2
Query: 20 KEPFQKCDFLTKALERYQFLVRDLHRITRRFV------KRSLGSQYRSLDDEAANDERFQ 181
KE F+KC+FLTK + R + + + +R +SL + L+DE N + +
Sbjct: 402 KEHFEKCEFLTKEMHRLKNEWSNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSK 461
Query: 182 GTVQELHVE 208
+ H E
Sbjct: 462 EQEAQEHSE 470
>SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1675
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 274 CDGQVVAFIHAKVRELLARCSQFHVQLLNCPLESFIVCSFIIQTPVLTS 128
C VVAF+ + +R L+ C V L CPL ++ F + L S
Sbjct: 179 CFSVVVAFLLSPLRVLVLPCFSVVVAFLLCPLRVIVLPCFSVVVAFLLS 227
>SB_41335| Best HMM Match : EGF (HMM E-Value=0.0035)
Length = 154
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 647 RRVSLQSLYRVWCTLMLDDKLR 582
++ S S+Y+ WC L+ DDK +
Sbjct: 77 KKDSADSIYKTWCELLSDDKFK 98
>SB_51437| Best HMM Match : RWD (HMM E-Value=1.3e-05)
Length = 359
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1
Query: 355 CKIEELRPSFQASYNAPYRCACHSSGRCDGQVVAFIHAKVRELLA 221
CK + + FQ S+ A Y+ S R G ++ FIHAK+ LLA
Sbjct: 204 CKEKMMNVIFQTSWKAEYKI---KSTR--GDLLTFIHAKIYLLLA 243
>SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 521 HIVDDQSFPYHSEKFPELSRLGAYHPTLVYTKRDIEIVVK 640
H V+ Q P H + F ++ L + P L Y + D+E+ V+
Sbjct: 353 HDVEWQWRPEHDQAFGKIKELTSKAPVLKYYEPDVELTVQ 392
>SB_49545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 647 RRVSLQSLYRVWCTLMLDDK 588
++ S S+Y+ WC L+ DDK
Sbjct: 77 KKDSADSIYKTWCELLSDDK 96
>SB_49120| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-08)
Length = 401
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 647 RRVSLQSLYRVWCTLMLDDK 588
++ S S+Y+ WC L+ DDK
Sbjct: 77 KKDSADSIYKTWCELLSDDK 96
>SB_16291| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-11)
Length = 423
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 653 SQRRVSLQSLYRVWCTLMLDDK 588
S ++ S S +++WC L+ DDK
Sbjct: 75 SGKKASADSSFKIWCELLSDDK 96
>SB_9818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 647 RRVSLQSLYRVWCTLMLDDK 588
++ S S+Y+ WC L+ DDK
Sbjct: 79 KKDSADSIYKTWCELLSDDK 98
>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = -1
Query: 334 PSFQASYNAPYRCACHSSGRCDGQVVAFIHAKVRELLARCSQFHVQ--LLN----CPLES 173
PSF+ASY + +C+C+++ + K +++ C VQ LL+ CPL S
Sbjct: 247 PSFRASYQSSMQCSCYNNNL---PAKCSMPCKDPQVIDLCGDIAVQQRLLSRQDPCPLHS 303
Query: 172 FIVCSFI-IQTPVLTS 128
S I I+ P++ S
Sbjct: 304 LSDTSGISIRQPIVES 319
>SB_56318| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.016)
Length = 583
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 332 WSQLFYL-TNDFR---ELRINSTDIYDYPRYAHRGLLLDTSRHYLSLSKILKNIDAMAAN 499
W+ YL T F+ E R+N T++ Y + +GL+L+ Y L N +AA+
Sbjct: 216 WTMSQYLPTGGFKWMTEKRMNETNLVKYGDDSKKGLILEVDLEYPKHLHDLHNDYPLAAD 275
Query: 500 KMNV 511
+NV
Sbjct: 276 WVNV 279
>SB_48972| Best HMM Match : Polysacc_synt_2 (HMM E-Value=3.4e-38)
Length = 148
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 494 ANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHPTLVY--TKRDIEIVVKHAAER 655
A K+N++ + D S Y+ E+F +S A +PT V TKR E+ V +E+
Sbjct: 8 AVKINIIGTRNIADLSLEYNVERFVMVSTDKAVNPTNVMGATKRAAELYVGCLSEK 63
>SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035)
Length = 330
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 653 SQRRVSLQSLYRVWCTLMLDDK 588
S ++ S S +++WC L+ DDK
Sbjct: 180 SGKKASADSSFKIWCELLSDDK 201
>SB_27962| Best HMM Match : Clathrin (HMM E-Value=4.1)
Length = 255
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 596 DDKLRVDLVRETFHCDKENSDHRRYANGVRSFYSRPWHRYSLVSSI 459
D +L LV H + DHR YA+ V +F P H + L +S+
Sbjct: 199 DHRLYASLVEAFNHSSLQ--DHRLYASLVEAFNHSPLHDHRLYASL 242
>SB_18365| Best HMM Match : EGF (HMM E-Value=0.00021)
Length = 188
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 647 RRVSLQSLYRVWCTLMLDDK 588
++ S S+Y+ WC L+ DDK
Sbjct: 77 KKDSADSIYKTWCELLSDDK 96
>SB_13099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 647 RRVSLQSLYRVWCTLMLDDK 588
++ S S+Y+ WC L+ DDK
Sbjct: 77 KKDSADSIYKTWCELLSDDK 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,320,523
Number of Sequences: 59808
Number of extensions: 442369
Number of successful extensions: 984
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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